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Kun Sun, Ph.D. - Publications

Affiliations: 
2014 Chemical Pathology The Chinese University of Hong Kong, Hong Kong, Hong Kong 
Area:
1. Drug resistant of pathogenic bacteria. 2. Molecular virology of HIV and HBV.
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29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Jiang P, Sun K, Peng W, Cheng SH, Ni M, Yeung PC, Heung MMS, Xie T, Shang H, Zhou Z, Chan RWY, Wong J, Wong VWS, Poon LC, Leung TY, et al. Plasma DNA end motif profiling as a fragmentomic marker in cancer, pregnancy and transplantation. Cancer Discovery. PMID 32111602 DOI: 10.1158/2159-8290.Cd-19-0622  0.303
2019 Sun K. Clonal hematopoiesis: background player in plasma cell-free DNA variants. Annals of Translational Medicine. 7: S384. PMID 32016102 DOI: 10.21037/Atm.2019.12.97  0.34
2019 Sun K, Jiang P, Cheng SH, Cheng THT, Wong J, Wong VWS, Ng SSM, Ma BBY, Leung TY, Chan SL, Mok TSK, Lai PBS, Chan HLY, Sun H, Chan KCA, et al. Orientation-aware plasma cell-free DNA fragmentation analysis in open chromatin regions informs tissue of origin. Genome Research. PMID 30808726 DOI: 10.1101/Gr.242719.118  0.354
2019 Gai W, Sun K. Epigenetic Biomarkers in Cell-Free DNA and Applications in Liquid Biopsy. Genes. 10. PMID 30634483 DOI: 10.3390/Genes10010032  0.321
2018 Serpas L, Chan RWY, Jiang P, Ni M, Sun K, Rashidfarrokhi A, Soni C, Sisirak V, Lee WS, Cheng SH, Peng W, Chan KCA, Chiu RWK, Reizis B, Lo YMD. deletion causes aberrations in length and end-motif frequencies in plasma DNA. Proceedings of the National Academy of Sciences of the United States of America. PMID 30593563 DOI: 10.1073/Pnas.1815031116  0.319
2018 Jiang P, Sun K, Tong YK, Cheng SH, Cheng THT, Heung MMS, Wong J, Wong VWS, Chan HLY, Chan KCA, Lo YMD, Chiu RWK. Preferred end coordinates and somatic variants as signatures of circulating tumor DNA associated with hepatocellular carcinoma. Proceedings of the National Academy of Sciences of the United States of America. PMID 30373822 DOI: 10.1073/Pnas.1814616115  0.342
2018 Gai W, Ji L, Lam WKJ, Sun K, Jiang P, Chan AWH, Wong J, Lai PBS, Ng SSM, Ma BBY, Wong GLH, Wong VWS, Chan HLY, Chiu RWK, Lo YMD, et al. Liver- and Colon-Specific DNA Methylation Markers in Plasma for Investigation of Colorectal Cancers With or Without Liver Metastases. Clinical Chemistry. PMID 29903871 DOI: 10.1373/Clinchem.2018.290304  0.336
2018 Sun K, Jiang P, Wong AIC, Cheng YKY, Cheng SH, Zhang H, Chan KCA, Leung TY, Chiu RWK, Lo YMD. Size-tagged preferred ends in maternal plasma DNA shed light on the production mechanism and show utility in noninvasive prenatal testing. Proceedings of the National Academy of Sciences of the United States of America. PMID 29760053 DOI: 10.1073/Pnas.1804134115  0.336
2018 Sun K, Lun FMF, Leung TY, Chiu RWK, Dennis Lo YM, Sun H. Noninvasive reconstruction of placental methylome from maternal plasma DNA: potential for prenatal testing and monitoring. Prenatal Diagnosis. PMID 29334402 DOI: 10.1002/Pd.5214  0.313
2017 Lam WKJ, Gai W, Sun K, Wong RSM, Chan RWY, Jiang P, Chan NPH, Hui WWI, Chan AWH, Szeto CC, Ng SC, Law MF, Chan KCA, Chiu RWK, Dennis Lo YM. DNA of Erythroid Origin is Present in Human Plasma and Informs the Types of Anemia. Clinical Chemistry. PMID 28784691 DOI: 10.1373/Clinchem.2017.272401  0.329
2017 Chen X, He L, Zhao Y, Li Y, Zhang S, Sun K, So K, Chen F, Zhou L, Lu L, Wang L, Zhu X, Bao X, Esteban MA, Nakagawa S, et al. Malat1 regulates myogenic differentiation and muscle regeneration through modulating MyoD transcriptional activity. Cell Discovery. 3: 17002. PMID 28326190 DOI: 10.1038/Celldisc.2017.2  0.305
2017 Sun K, Allen Chan KC, Hudecova I, Chiu RW, Dennis Lo YM, Jiang P. COFFEE: control-free noninvasive fetal chromosomal examination using maternal plasma DNA. Prenatal Diagnosis. PMID 28165140 DOI: 10.1002/Pd.5016  0.319
2017 Yang X, Zhao Y, Sun K, Li Y, Zhou J, Wang J, Sun H, Wang CC, Kwong J, Wang H, Chung TKH. Abstract 3448: LncRNA HAND2-AS1 inactivates neuromedin U (NMU) and inhibits tumor invasion and metastasis in endometrioid endometrial carcinoma Cancer Research. 77: 3448-3448. DOI: 10.1158/1538-7445.Am2017-3448  0.319
2016 Jiang P, Peng X, Su X, Sun K, Yu SCY, Chu WI, Leung TY, Sun H, Chiu RWK, Lo YMD, Chan KCA. FetalQuantSD: accurate quantification of fetal DNA fraction by shallow-depth sequencing of maternal plasma DNA. Npj Genomic Medicine. 1: 16013. PMID 29263813 DOI: 10.1038/Npjgenmed.2016.13  0.338
2016 Jiang P, Tong YK, Sun K, Cheng SH, Leung TY, Allen Chan KC, Chiu RW, Ming Dennis Lo Y. Gestational Age Assessment by Methylation and Size Profiling of Maternal Plasma DNA: A Feasibility Study. Clinical Chemistry. PMID 27979959 DOI: 10.1373/Clinchem.2016.265702  0.314
2016 Chan KC, Jiang P, Sun K, Cheng YK, Tong YK, Cheng SH, Wong AI, Hudecova I, Leung TY, Chiu RW, Lo YM. Second generation noninvasive fetal genome analysis reveals de novo mutations, single-base parental inheritance, and preferred DNA ends. Proceedings of the National Academy of Sciences of the United States of America. PMID 27799561 DOI: 10.1073/Pnas.1615800113  0.341
2016 Wong FC, Sun K, Jiang P, Cheng YK, Chan KC, Leung TY, Chiu RW, Lo YM. Cell-free DNA in maternal plasma and serum: A comparison of quantity, quality and tissue origin using genomic and epigenomic approaches. Clinical Biochemistry. PMID 27620950 DOI: 10.1016/J.Clinbiochem.2016.09.009  0.329
2016 Sun K, Zhou L, Zhao Y, Wang H, Sun H. Genome-wide RNA-seq and ChIP-seq reveal Linc-YY1 function in regulating YY1/PRC2 activity during skeletal myogenesis. Genomics Data. 7: 247-9. PMID 26981420 DOI: 10.1016/J.Gdata.2016.01.022  0.319
2015 Sun K, Jiang P, Chan KC, Wong J, Cheng YK, Liang RH, Chan WK, Ma ES, Chan SL, Cheng SH, Chan RW, Tong YK, Ng SS, Wong RS, Hui DS, et al. Plasma DNA tissue mapping by genome-wide methylation sequencing for noninvasive prenatal, cancer, and transplantation assessments. Proceedings of the National Academy of Sciences of the United States of America. PMID 26392541 DOI: 10.1073/Pnas.1508736112  0.352
2015 Sun K, Jiang P, Chan KA. The impact of digital DNA counting technologies on noninvasive prenatal testing. Expert Review of Molecular Diagnostics. 15: 1261-8. PMID 26358092 DOI: 10.1586/14737159.2015.1084227  0.32
2015 Cheng SH, Jiang P, Sun K, Cheng YK, Chan KC, Leung TY, Chiu RW, Lo YM. Noninvasive Prenatal Testing by Nanopore Sequencing of Maternal Plasma DNA: Feasibility Assessment. Clinical Chemistry. PMID 26286915 DOI: 10.1373/Clinchem.2015.245076  0.32
2015 Wang L, Zhao Y, Bao X, Zhu X, Kwok YK, Sun K, Chen X, Huang Y, Jauch R, Esteban MA, Sun H, Wang H. LncRNA Dum interacts with Dnmts to regulate Dppa2 expression during myogenic differentiation and muscle regeneration. Cell Research. 25: 335-50. PMID 25686699 DOI: 10.1038/Cr.2015.21  0.323
2014 Sun K, Lu L, Wang H, Sun H. Genome-wide profiling of YY1 binding sites during skeletal myogenesis. Genomics Data. 2: 89-91. PMID 26484078 DOI: 10.1016/J.Gdata.2014.05.008  0.304
2014 Zhao Y, Yang Y, Trovik J, Sun K, Zhou L, Jiang P, Lau TS, Hoivik EA, Salvesen HB, Sun H, Wang H. A novel wnt regulatory axis in endometrioid endometrial cancer. Cancer Research. 74: 5103-17. PMID 25085246 DOI: 10.1158/0008-5472.Can-14-0427  0.3
2014 Jiang P, Sun K, Lun FM, Guo AM, Wang H, Chan KC, Chiu RW, Lo YM, Sun H. Methy-Pipe: an integrated bioinformatics pipeline for whole genome bisulfite sequencing data analysis. Plos One. 9: e100360. PMID 24945300 DOI: 10.1371/Journal.Pone.0100360  0.31
2014 Sun K, Zhao Y, Wang H, Sun H. Sebnif: an integrated bioinformatics pipeline for the identification of novel large intergenic noncoding RNAs (lincRNAs)--application in human skeletal muscle cells. Plos One. 9: e84500. PMID 24400097 DOI: 10.1371/Journal.Pone.0084500  0.306
2013 Chan KC, Jiang P, Chan CW, Sun K, Wong J, Hui EP, Chan SL, Chan WC, Hui DS, Ng SS, Chan HL, Wong CS, Ma BB, Chan AT, Lai PB, et al. Noninvasive detection of cancer-associated genome-wide hypomethylation and copy number aberrations by plasma DNA bisulfite sequencing. Proceedings of the National Academy of Sciences of the United States of America. 110: 18761-8. PMID 24191000 DOI: 10.1073/Pnas.1313995110  0.329
2013 Lu L, Sun K, Chen X, Zhao Y, Wang L, Zhou L, Sun H, Wang H. Genome-wide survey by ChIP-seq reveals YY1 regulation of lincRNAs in skeletal myogenesis. The Embo Journal. 32: 2575-88. PMID 23942234 DOI: 10.1038/Emboj.2013.182  0.324
2013 Lun FM, Chiu RW, Sun K, Leung TY, Jiang P, Chan KC, Sun H, Lo YM. Noninvasive prenatal methylomic analysis by genomewide bisulfite sequencing of maternal plasma DNA. Clinical Chemistry. 59: 1583-94. PMID 23857673 DOI: 10.1373/Clinchem.2013.212274  0.334
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