Joshua J. Waterfall, Ph.D. - Publications

Affiliations: 
2006 Cornell University, Ithaca, NY, United States 

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Li J, Woods SL, Healey S, Beesley J, Chen X, Lee JS, Sivakumaran H, Wayte N, Nones K, Waterfall JJ, Pearson J, Patch AM, Senz J, Ferreira MA, Kaurah P, et al. Point Mutations in Exon 1B of APC Reveal Gastric Adenocarcinoma and Proximal Polyposis of the Stomach as a Familial Adenomatous Polyposis Variant. American Journal of Human Genetics. PMID 27087319 DOI: 10.1016/J.Ajhg.2016.03.001  0.68
2016 Sorber R, Teper Y, Abisoye-Ogunniyan A, Waterfall JJ, Davis S, Killian JK, Pineda M, Ray S, McCord MR, Pflicke H, Burkett SS, Meltzer PS, Rudloff U. Whole Genome Sequencing of Newly Established Pancreatic Cancer Lines Identifies Novel Somatic Mutation (c.2587G>A) in Axon Guidance Receptor Plexin A1 as Enhancer of Proliferation and Invasion. Plos One. 11: e0149833. PMID 26962861 DOI: 10.1371/Journal.Pone.0149833  0.68
2015 Grøntved L, Waterfall JJ, Kim DW, Baek S, Sung MH, Zhao L, Park JW, Nielsen R, Walker RL, Zhu YJ, Meltzer PS, Hager GL, Cheng SY. Transcriptional activation by the thyroid hormone receptor through ligand-dependent receptor recruitment and chromatin remodelling. Nature Communications. 6: 7048. PMID 25916672 DOI: 10.1038/Ncomms8048  0.68
2015 Waterfall JJ, Meltzer PS. Avalanching mutations in biallelic mismatch repair deficiency syndrome. Nature Genetics. 47: 194-6. PMID 25711864 DOI: 10.1038/Ng.3227  0.68
2014 Killian JK, Miettinen M, Walker RL, Wang Y, Zhu YJ, Waterfall JJ, Noyes N, Retnakumar P, Yang Z, Smith WI, Killian MS, Lau CC, Pineda M, Walling J, Stevenson H, et al. Recurrent epimutation of SDHC in gastrointestinal stromal tumors. Science Translational Medicine. 6: 268ra177. PMID 25540324 DOI: 10.1126/Scitranslmed.3009961  0.68
2014 Waterfall JJ, Meltzer PS. Building through breaking: the development of cancer neochromosomes. Cancer Cell. 26: 593-5. PMID 25517741 DOI: 10.1016/J.Ccell.2014.10.013  0.68
2014 Waterfall JJ, Killian JK, Meltzer PS. The role of mutation of metabolism-related genes in genomic hypermethylation Biochemical and Biophysical Research Communications. 455: 16-23. PMID 25111818 DOI: 10.1016/J.Bbrc.2014.08.003  0.68
2014 Waterfall JJ, Arons E, Walker RL, Pineda M, Roth L, Killian JK, Abaan OD, Davis SR, Kreitman RJ, Meltzer PS. High prevalence of MAP2K1 mutations in variant and IGHV4-34-expressing hairy-cell leukemias. Nature Genetics. 46: 8-10. PMID 24241536 DOI: 10.1038/Ng.2828  0.68
2013 Killian JK, Kim SY, Miettinen M, Smith C, Merino M, Tsokos M, Quezado M, Smith WI, Jahromi MS, Xekouki P, Szarek E, Walker RL, Lasota J, Raffeld M, Klotzle B, ... ... Waterfall JJ, et al. Succinate dehydrogenase mutation underlies global epigenomic divergence in gastrointestinal stromal tumor. Cancer Discovery. 3: 648-57. PMID 23550148 DOI: 10.1158/2159-8290.Cd-13-0092  0.68
2012 Core LJ, Waterfall JJ, Gilchrist DA, Fargo DC, Kwak H, Adelman K, Lis JT. Defining the status of RNA polymerase at promoters. Cell Reports. 2: 1025-35. PMID 23062713 DOI: 10.1016/J.Celrep.2012.08.034  0.68
2012 Chatterjee R, Zhao J, He X, Shlyakhtenko A, Mann I, Waterfall JJ, Meltzer P, Sathyanarayana BK, FitzGerald PC, Vinson C. Overlapping ETS and CRE Motifs ((G/C)CGGAAGTGACGTCA) preferentially bound by GABPα and CREB proteins. G3 (Bethesda, Md.). 2: 1243-56. PMID 23050235 DOI: 10.1534/G3.112.004002  0.68
2012 Waterfall JJ, Meltzer PS. Targeting epigenetic misregulation in synovial sarcoma. Cancer Cell. 21: 323-4. PMID 22439927 DOI: 10.1016/J.Ccr.2012.02.023  0.68
2011 Killian JK, Bilke S, Davis S, Walker RL, Jaeger E, Killian MS, Waterfall JJ, Bibikova M, Fan JB, Smith WI, Meltzer PS. A methyl-deviator epigenotype of estrogen receptor-positive breast carcinoma is associated with malignant biology American Journal of Pathology. 179: 55-65. PMID 21641572 DOI: 10.1016/J.Ajpath.2011.03.022  0.68
2011 Hah N, Danko CG, Core L, Waterfall JJ, Siepel A, Lis JT, Kraus WL. A rapid, extensive, and transient transcriptional response to estrogen signaling in breast cancer cells. Cell. 145: 622-34. PMID 21549415 DOI: 10.1016/J.Cell.2011.03.042  0.68
2011 Min IM, Waterfall JJ, Core LJ, Munroe RJ, Schimenti J, Lis JT. Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells. Genes & Development. 25: 742-54. PMID 21460038 DOI: 10.1101/Gad.2005511  0.68
2008 Core LJ, Waterfall JJ, Lis JT. Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters. Science (New York, N.Y.). 322: 1845-8. PMID 19056941 DOI: 10.1126/Science.1162228  0.68
2008 Casey FP, Waterfall JJ, Gutenkunst RN, Myers CR, Sethna JP. Variational method for estimating the rate of convergence of Markov-chain Monte Carlo algorithms. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 78: 046704. PMID 18999558 DOI: 10.1103/Physreve.78.046704  0.68
2007 Gutenkunst RN, Casey FP, Waterfall JJ, Myers CR, Sethna JP. Extracting falsifiable predictions from sloppy models. Annals of the New York Academy of Sciences. 1115: 203-11. PMID 17925353 DOI: 10.1196/Annals.1407.003  0.68
2007 Gutenkunst RN, Waterfall JJ, Casey FP, Brown KS, Myers CR, Sethna JP. Universally sloppy parameter sensitivities in systems biology models. Plos Computational Biology. 3: 1871-78. PMID 17922568 DOI: 10.1371/Journal.Pcbi.0030189  0.68
2007 Casey FP, Baird D, Feng Q, Gutenkunst RN, Waterfall JJ, Myers CR, Brown KS, Cerione RA, Sethna JP. Optimal experimental design in an epidermal growth factor receptor signalling and down-regulation model. Iet Systems Biology. 1: 190-202. PMID 17591178 DOI: 10.1049/Iet-Syb:20060065  0.68
2006 Waterfall JJ, Casey FP, Gutenkunst RN, Brown KS, Myers CR, Brouwer PW, Elser V, Sethna JP. Sloppy-model universality class and the Vandermonde matrix. Physical Review Letters. 97: 150601. PMID 17155311 DOI: 10.1103/Physrevlett.97.150601  0.68
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