Xun Gu, Ph.D. - Publications

Affiliations: 
2004 Georgia Institute of Technology, Atlanta, GA 
Area:
Optical Physics

93 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Wu J, Wang W, Zhang J, Zhou B, Zhao W, Su Z, Gu X, Wu J, Zhou Z, Chen S. DeepHLApan: A Deep Learning Approach for Neoantigen Prediction Considering Both HLA-Peptide Binding and Immunogenicity. Frontiers in Immunology. 10: 2559. PMID 31736974 DOI: 10.3389/fimmu.2019.02559  0.4
2019 Liu A, He F, Zhou J, Zou Y, Su Z, Gu X. Comparative Transcriptome Analyses Reveal the Role of Conserved Function in Electric Organ Convergence Across Electric Fishes. Frontiers in Genetics. 10: 664. PMID 31379927 DOI: 10.3389/fgene.2019.00664  0.4
2019 He F, Wei R, Zhou Z, Huang L, Wang Y, Tang J, Zou Y, Shi L, Gu X, Davis MJ, Su Z. Integrative Analysis of Somatic Mutations in Non-coding Regions Altering RNA Secondary Structures in Cancer Genomes. Scientific Reports. 9: 8205. PMID 31160636 DOI: 10.1038/s41598-019-44489-5  0.4
2019 Li Q, Liu A, Gu X, Su Z. Olfactomedin domain-containing proteins: evolution, functional divergence, expression patterns and damaging SNPs. Molecular Genetics and Genomics : Mgg. PMID 30915543 DOI: 10.1007/s00438-019-01549-9  0.4
2018 Wu J, Zhao W, Zhou B, Su Z, Gu X, Zhou Z, Chen S. \TSNAdb: A Database for Tumor-specific Neoantigens from Immunogenomics Data Analysis. Genomics, Proteomics & Bioinformatics. PMID 30223042 DOI: 10.1016/j.gpb.2018.06.003  0.4
2017 Zhou Z, Zou Y, Liu G, Zhou J, Wu J, Zhao S, Su Z, Gu X. Mutation-profile-based methods for understanding selection forces in cancer somatic mutations: a comparative analysis. Oncotarget. 8: 58835-58846. PMID 28938601 DOI: 10.18632/oncotarget.19371  0.4
2017 Zhou Z, Zou Y, Liu G, Zhou J, Wu J, Zhao S, Su Z, Gu X. Mutation-profile-based methods for understanding selection forces in cancer somatic mutations: a comparative analysis. Oncotarget. PMID 28747543 DOI: 10.18632/oncotarget.19371  0.4
2017 Sa Z, Zhou J, Zou Y, Su Z, Gu X. Paralog-divergent Features May Help Reduce Off-target Effects of Drugs: Hints from Glucagon Subfamily Analysis. Genomics, Proteomics & Bioinformatics. PMID 28642113 DOI: 10.1016/j.gpb.2017.03.004  0.4
2017 Zhou J, Liu D, Sa Z, Huang W, Zou Y, Gu X. Effective Estimation of the Minimum Number of Amino Acid Residues Required for Functional Divergence between Duplicate Genes. Molecular Phylogenetics and Evolution. PMID 28506933 DOI: 10.1016/j.ympev.2017.05.010  0.4
2017 Zhou Z, Lyu X, Wu J, Yang X, Wu S, Zhou J, Gu X, Su Z, Chen S. TSNAD: an integrated software for cancer somatic mutation and tumour-specific neoantigen detection. Royal Society Open Science. 4: 170050. PMID 28484631 DOI: 10.1098/rsos.170050  0.4
2017 Gu X, Ruan H, Su Z, Zou Y. Brownian Model of Transcriptome Evolution and Phylogenetic Network Visualization between Tissues. Molecular Phylogenetics and Evolution. PMID 28442318 DOI: 10.1016/j.ympev.2017.03.027  0.4
2016 Ruan H, Su Z, Gu X. TreeExp1.0: R Package for Analyzing Expression Evolution Based on RNA-Seq Data. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. PMID 27781409 DOI: 10.1002/jez.b.22707  0.4
2016 Wang X, Xu L, Wu Q, Liu M, Tang F, Cai Y, Fan W, Huang H, Gu X. Inhibition of LDHA Deliver Potential Anticancer Performance in Renal Cell Carcinoma. Urologia Internationalis. PMID 27027898 DOI: 10.1159/000445125  0.6
2016 Zhang Q, Wang Y, Man L, Zhu Z, Bai X, Wei S, Liu Y, Liu M, Wang X, Gu X, Wang Y. Reactive oxygen species generated from skeletal muscles are required for gecko tail regeneration. Scientific Reports. 6: 20752. PMID 26853930 DOI: 10.1038/srep20752  0.32
2016 Shi W, Huang W, Chen Y, Zhang S, Xu P, Gu X, Fan H, Xu J, Chen Y, Ni R, Lu C, Zhang X. Low expression of PIDD is associated with cell proliferation and apoptosis in hepatocellular carcinoma. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26846109 DOI: 10.1007/s13277-015-4556-y  0.4
2016 Shen Y, Xu L, Liu M, Lei Y, Gu X, Ma Z. The effects of an intraperitoneal single low dose of ketamine in attenuating the postoperative skin/muscle incision and retraction-induced pain related to the inhibition of N-methyl-D-aspartate receptors in the spinal cord. Neuroscience Letters. PMID 26808640 DOI: 10.1016/j.neulet.2015.12.045  0.6
2016 Zhao M, Wu J, Zhang W, Gu X, Wu Y. Optimal planning of AC charging piles based on constraints of time and space Dianli Xitong Zidonghua/Automation of Electric Power Systems. 40: 66-70 and 104. DOI: 10.7500/AEPS20150310008  0.36
2016 Zhang WP, Chen H, Gu XL. Bond behaviour between corroded steel bars and concrete under different strain rates Magazine of Concrete Research. 68: 364-378. DOI: 10.1680/jmacr.15.00174  0.44
2016 Meng Z, Liu Z, Gu X, Pu L, Yang X, Qin Z, Zhu K, Zhang L. Guaranteed V2V QoS services implementation and field measurements in hybrid WAVE\LTE environments Ieee Region 10 Annual International Conference, Proceedings/Tencon. 2016. DOI: 10.1109/TENCON.2015.7373090  0.4
2016 Zhao X, Gu X, Zhang X, Gong Y, Zhang L, Li W. Investigation of different MCS selection algorithm to reduce the impact of CSI-RS on LTE legacy UEs Ieee Region 10 Annual International Conference, Proceedings/Tencon. 2016. DOI: 10.1109/TENCON.2015.7373083  0.4
2016 Liu Y, Gong G, Sun Y, Gu X, Huang L, Wang Z. Isolation, structural characterization, and immunological activity of a polysaccharide LRLP4-A from the leaves of Lycium ruthenicum Journal of Carbohydrate Chemistry. 1-17. DOI: 10.1080/07328303.2015.1120875  0.36
2016 Zhang L, Li M, Zhao C, Gu X. A novel fluorescent probe for discrimination of Cys from GSH: Inspiration from chemical ligation Tetrahedron Letters. 57: 578-581. DOI: 10.1016/j.tetlet.2015.12.093  0.4
2016 Zhang L, Gu X, Lu P, Wang Y. Synthesis of α-aminonitriles via a FeSO4-mediated oxidative cyanation of tertiary amines with benzoyl cyanide and molecular oxygen or TBHP Tetrahedron. 72. DOI: 10.1016/j.tet.2016.03.061  0.4
2016 Tang Y, Dai F, Gu X, Wang Z, Zhang W. Secondary dislocation structures in a Ni-TiN system from the GMS and O-lattice theory Physica E: Low-Dimensional Systems and Nanostructures. 77: 97-101. DOI: 10.1016/j.physe.2015.11.007  0.36
2016 Yu QQ, Gu XL, Li Y, Lin F. Collapse-resistant performance of super-large cooling towers subjected to seismic actions Engineering Structures. 108: 77-89. DOI: 10.1016/j.engstruct.2015.11.023  0.44
2016 Huang M, Zhang J, Cai S, Liao Y, Zhao W, Hu C, Gu X, Fang L, Zhang W. Mass spectrometric study of aged benzene secondary organic aerosol in the presence of dry ammonium sulfate Journal of Atmospheric Chemistry. 1-16. DOI: 10.1007/s10874-016-9328-6  0.36
2016 Cao X, Ni B, Liang J, Xiang Z, Wang Q, Shi R, Gu X, Zhou C, Zhao Z, Fu S, Liu J. Resonant scattering of central plasma sheet protons by multiband EMIC waves and resultant proton loss timescales Journal of Geophysical Research a: Space Physics. DOI: 10.1002/2015JA021933  0.32
2016 Wang W, Deng J, Gu X, Zhou S, Jiang G, Chen Y, Xu J, Zhang G, Tang Y, Jin J, Tan Y, Ge Z, Zhou Y. Reduced cullin1 expression enhances the effects of fluorouracil-leucovorin-oxaliplatin in resectable gastric cancer International Journal of Clinical and Experimental Medicine. 9: 2929-2936.  0.36
2015 Liu W, Gu X, Fu R, Li Y, Lv M, Sun T, Lv C, Liu X, Xue F, Zhang L, Yang R. The Effect of Danazol in Primary Immune Thrombocytopenia: An Analysis of a Large Cohort From a Single Center in China. Clinical and Applied Thrombosis/Hemostasis : Official Journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis. PMID 26681745 DOI: 10.1177/1076029615622002  0.4
2015 Zou HY, Gu X, Yu WZ, Wang Z, Jiao M. Detection of serum antinuclear antibodies in lymphoma patients. Genetics and Molecular Research : Gmr. 14: 16546-52. PMID 26681000 DOI: 10.4238/2015.December.11.1  0.36
2015 Sun Y, Gu X, Wang Z, Huang Y, Wei Y, Zhang M, Tu K, Pan L. Growth Simulation and Discrimination of Botrytis cinerea, Rhizopus stolonifer and Colletotrichum acutatum Using Hyperspectral Reflectance Imaging. Plos One. 10: e0143400. PMID 26642054 DOI: 10.1371/journal.pone.0143400  0.36
2015 Ren G, Ali T, Chen W, Han D, Zhang L, Gu X, Zhang S, Ding L, Fanning S, Han B. The role of selenium in insulin-like growth factor I receptor (IGF-IR) expression and regulation of apoptosis in mouse osteoblasts. Chemosphere. 144: 2158-2164. PMID 26595309 DOI: 10.1016/j.chemosphere.2015.11.003  0.4
2015 Xu J, Li PX, Wu J, Gao YJ, Yin MX, Lin Y, Yang M, Chen DP, Sun HP, Liu ZB, Gu XC, Huang HL, Fu LL, Hu HM, He LL, et al. Involvement of the Hippo Pathway in Regeneration and Fibrogenesis after Ischemic Acute Kidney Injury: YAP is the Key Effector. Clinical Science (London, England : 1979). PMID 26574480 DOI: 10.1042/CS20150385  0.4
2015 Gu XZ, Chen KN, Wang ZD. Response of N2O emissions to elevated water depth regulation: comparison of rhizosphere versus non-rhizosphere of Phragmites australis in a field-scale study. Environmental Science and Pollution Research International. PMID 26561329 DOI: 10.1007/s11356-015-5776-9  0.52
2015 Li X, Gong Z, Zhang L, Zhao C, Zhao X, Gu X, Chen H. Autophagy knocked down by high-risk HPV infection and uterine cervical carcinogenesis. International Journal of Clinical and Experimental Medicine. 8: 10304-14. PMID 26379821  0.4
2015 Ye H, Feng J, Zhang L, Zhang J, Mispan MS, Cao Z, Yang J, Beighley DH, Gu X. Map-Based Cloning of qSD1-2 Identified a Gibberellin Synthesis Gene Regulating the Development of Endosperm-Imposed Dormancy in Rice. Plant Physiology. PMID 26373662 DOI: 10.1104/pp.15.01202  0.4
2015 Morse BL, Cai H, MacGuire JG, Fox M, Zhang L, Zhang Y, Gu X, Shen H, Dierks EA, Su H, Luk CE, Marathe P, Shu YZ, Humphreys WG, Lai Y. Rosuvastatin Liver Partitioning in Cynomolgus Monkeys: Measurement In Vivo and Prediction Using In Vitro Monkey Hepatocyte Uptake. Drug Metabolism and Disposition: the Biological Fate of Chemicals. PMID 26341276 DOI: 10.1124/dmd.115.065946  0.4
2015 Zhao Q, Yue J, Zhang C, Gu X, Chen H, Xu L. Inactivation of M2 AChR/NF-κB signaling axis reverses epithelial-mesenchymal transition (EMT) and suppresses migration and invasion in non-small cell lung cancer (NSCLC). Oncotarget. PMID 26336823  0.6
2015 Xue J, Chen Z, Gu X, Zhang Y, Zhang W. MicroRNA-148a inhibits migration of breast cancer cells by targeting MMP-13. Tumour Biology : the Journal of the International Society For Oncodevelopmental Biology and Medicine. PMID 26298724 DOI: 10.1007/s13277-015-3926-9  0.36
2015 Gai Y, Lin X, Ma Q, Hu C, Gu X, Zhao W, Fang B, Zhang W, Long B, Long Z. Experimental and Theoretical Study of Reactions of OH Radicals with Hexenols: An Evaluation of the Relative Importance of the H-Abstraction Reaction Channel. Environmental Science & Technology. PMID 26274814 DOI: 10.1021/acs.est.5b01682  0.36
2015 Shen L, Liu G, Zou Y, Zhou Z, Su Z, Gu X. The evolutionary panorama of organ-specifically expressed or repressed orthologous genes in nine vertebrate species. Plos One. 10: e0116872. PMID 25679776 DOI: 10.1371/journal.pone.0116872  0.4
2015 Cheng L, Bai X, Gu X. Influence of transjugular intrahepatic portosystemic shunt on fibrinogen in patients with gastroesophageal varices Chinese Journal of Radiology (China). 49: 868-869. DOI: 10.3760/cma.j.issn.1005-1201.2015.11.014  0.32
2015 Bai X, Wen Y, Wei G, Gu X. Effects of water depth gradient on growth and chlorophyll fluorescence characteristics of Arundo donax Chinese Journal of Applied and Environmental Biology. 21: 1157-1161. DOI: 10.3724/SP.J.1145.2015.04041  0.52
2015 Yu JH, Zhong JC, Fan CX, Huang W, Shang JG, Gu XZ. Environmental effect of substrate amelioration on lake: Effects on phragmites communis growth and photosynthetic fluorescence characteristics Huanjing Kexue/Environmental Science. 36: 4444-4454. DOI: 10.13227/j.hjkx.2015.12.016  0.52
2015 Gu X, Sun S, Zhang Q, Fan C, Chen K. Influence of anaerobic and aerobic processes on dissolved nitrogen and phosphorus nutrient distribution and exchange process across the sediment-water interface Research of Environmental Sciences. 28: 1524-1530. DOI: 10.13198/j.issn.1001-6929.2015.10.05  0.52
2015 Gu X, Chen K, Fan C. Preliminary evidence of effects of Phragmites australis growth on N2O emissions by laboratory microcosms Ecological Engineering. 83: 33-38. DOI: 10.1016/j.ecoleng.2015.06.008  0.52
2014 Su Z, Wang J, Gu X. Effect of duplicate genes on mouse genetic robustness: an update. Biomed Research International. 2014: 758672. PMID 25110693 DOI: 10.1155/2014/758672  0.4
2014 Zhou Z, Zhou J, Su Z, Gu X. Asymmetric evolution of human transcription factor regulatory networks. Molecular Biology and Evolution. 31: 2149-55. PMID 24847042 DOI: 10.1093/molbev/msu163  0.4
2014 Zhang L, Liao Q, Gu X, He W, Zhang Z, Fan C. Oxygen and phosphorus dynamics in freshwater sediment after the deposition of flocculated cyanobacteria and the role of tubificid worms Journal of Hazardous Materials. 266: 1-9. PMID 24374559 DOI: 10.1016/j.jhazmat.2013.12.008  0.52
2014 Liu G, Zou Y, Cheng Q, Zeng Y, Gu X, Su Z. Age distribution patterns of human gene families: divergent for Gene Ontology categories and concordant between different subcellular localizations. Molecular Genetics and Genomics : Mgg. 289: 137-47. PMID 24322347 DOI: 10.1007/s00438-013-0799-8  0.4
2013 Gu X, Zou Y, Huang W, Shen L, Arendsee Z, Su Z. Phylogenomic distance method for analyzing transcriptome evolution based on RNA-seq data. Genome Biology and Evolution. 5: 1746-53. PMID 23940099 DOI: 10.1093/gbe/evt121  0.4
2013 Wang E, Sun S, Qiao B, Duan W, Huang G, An Y, Xu S, Zheng Y, Su Z, Gu X, Jin L, Wang H. Identification of functional mutations in GATA4 in patients with congenital heart disease. Plos One. 8: e62138. PMID 23626780 DOI: 10.1371/journal.pone.0062138  0.4
2013 Gu X, Zou Y, Su Z, Huang W, Zhou Z, Arendsee Z, Zeng Y. An update of DIVERGE software for functional divergence analysis of protein family. Molecular Biology and Evolution. 30: 1713-9. PMID 23589455 DOI: 10.1093/molbev/mst069  0.4
2013 Gu X, Chen K, Huang W, Bai X, Fan C. The influence of emergent macrophytes on porewater PO4 3- distribution and physic transport in the estuary wetlands Advanced Materials Research. 610: 2683-2687. DOI: 10.4028/www.scientific.net/AMR.610-613.2683  0.52
2012 Zou Y, Su Z, Huang W, Gu X. Histone modification pattern evolution after yeast gene duplication. Bmc Evolutionary Biology. 12: 111. PMID 22776110 DOI: 10.1186/1471-2148-12-111  0.4
2012 Su Z, Gu X. Revisit on the evolutionary relationship between alternative splicing and gene duplication. Gene. 504: 102-6. PMID 22621894 DOI: 10.1016/j.gene.2012.05.012  0.4
2012 Gu XZ, Chen KN, Huang W, Zhang L, Shen QS, Wang ZD, Fan CX. Preliminary application of a novel and cost-effective in-site technology in compacted lakeshore sediments for wetland restoration Ecological Engineering. 44: 290-297. DOI: 10.1016/j.ecoleng.2012.04.010  0.52
2011 Su Z, Huang W, Gu X. Comment on "Positive selection of tyrosine loss in metazoan evolution". Science (New York, N.Y.). 332: 917; author reply 91. PMID 21596977 DOI: 10.1126/science.1187374  0.4
2011 Zou Y, Huang W, Gu Z, Gu X. Predominant gain of promoter TATA box after gene duplication associated with stress responses. Molecular Biology and Evolution. 28: 2893-904. PMID 21515810 DOI: 10.1093/molbev/msr116  0.4
2011 Zhang L, Gu XZ, Shao SG, Hu HY, Zhong JC, Fan CX. Impacts of Asian clams (Corbicula fluminea) on lake sediment properties and phosphorus movement Huanjing Kexue/Environmental Science. 32: 88-95. PMID 21404669  0.52
2011 Gu XZ, Zhang L, Bai X, Shen QS, Wang ZD, Fan CX. Nutrient exchange across sediment-water interface in wetlands Shuikexue Jinzhan/Advances in Water Science. 22: 75-83. DOI: CNKI:32-1309/P.20110115.2220.006  0.52
2011 Bai X, Chen K, Gu X, Huang W, Chen X. Effect of water gradient on the growth of scirpus yagara Chinese Journal of Applied and Environmental Biology. 17: 34-38. DOI: 10.3724/SP.J.1145.2011.00034  0.52
2010 Zhang L, Gu X, Fanl C, Shang J, Shen Q, Wang Z, Shen J. Impact of different benthic animals on phosphorus dynamics across the sediment-water interface. Journal of Environmental Sciences (China). 22: 1674-82. PMID 21235153 DOI: 10.1016/S1001-0742(09)60305-3  0.52
2010 Zhong J, Fan C, Liu G, Zhang L, Shang J, Gu X. Seasonal variation of potential denitrification rates of surface sediment from Meiliang Bay, Taihu Lake, China. Journal of Environmental Sciences (China). 22: 961-7. PMID 21174984 DOI: 10.1016/S1001-0742(09)60205-9  0.52
2010 Gu XZ, Zhang L, Bo X, Fan CX. Characteristics of sediments and pore water in Lake Nansi wetland Huanjing Kexue/Environmental Science. 31: 939-945. PMID 20527174  0.52
2010 Su Z, Zeng Y, Gu X. A preliminary analysis of gene pleiotropy estimated from protein sequences. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 314: 115-22. PMID 19637279 DOI: 10.1002/jez.b.21315  0.4
2010 Gu XZ, Zhang L, Zhang GY, Fan CX, Chen L. Preliminary evidence that copper and zinc inhibits the dissipation of synthetic pyrethroid in red soil Water, Air, and Soil Pollution. 212: 345-355. DOI: 10.1007/s11270-010-0348-6  0.52
2010 Jiang J, Kong F, Gu X, Chen K, Zhao S, Wang J. Influence of intraspecific interaction and substrate type on initial growth and establishment of Hydrilla verticillata Hydrobiologia. 649: 255-265. DOI: 10.1007/s10750-010-0265-0  0.52
2010 Gu XZ, Wang Q, Zhang L, Shen QS, Wang ZD, Fan CX. Influence of physical amelioration on the characteristic of sediments and pore waters in Lake Nansi Wetland Zhongguo Huanjing Kexue/China Environmental Science. 30: 256-262.  0.52
2009 Huang Y, Zheng Y, Su Z, Gu X. Differences in duplication age distributions between human GPCRs and their downstream genes from a network prospective. Bmc Genomics. 10: S14. PMID 19594873 DOI: 10.1186/1471-2164-10-S1-S14  0.4
2009 Zou Y, Su Z, Yang J, Zeng Y, Gu X. Uncovering genetic regulatory network divergence between duplicate genes using yeast eQTL landscape. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 312: 722-33. PMID 19373876 DOI: 10.1002/jez.b.21290  0.4
2009 Gu X, Su Z, Huang Y. Simultaneous expansions of microRNAs and protein-coding genes by gene/genome duplications in early vertebrates. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 312: 164-70. PMID 19214983 DOI: 10.1002/jez.b.21273  0.4
2009 Xu L, Su Z, Gu Z, Gu X. Evolution of RNases in leaf monkeys: being parallel gene duplications or parallel gene conversions is a problem of molecular phylogeny. Molecular Phylogenetics and Evolution. 50: 397-400. PMID 19041725 DOI: 10.1016/j.ympev.2008.11.003  0.6
2009 Cheng Q, Su Z, Zhong Y, Gu X. Effect of site-specific heterogeneous evolution on phylogenetic reconstruction: a simple evaluation. Gene. 441: 156-62. PMID 18778757 DOI: 10.1016/j.gene.2008.08.003  0.4
2008 Su Z, Gu X. Predicting the proportion of essential genes in mouse duplicates based on biased mouse knockout genes. Journal of Molecular Evolution. 67: 705-9. PMID 19005716 DOI: 10.1007/s00239-008-9170-9  0.4
2008 Dai RL, Zhang GY, Gu XZ, Wang MK. Sorption of 1,1,1-trichloro-2,2-bis(p-chlorophenyl) ethane (DDT) by clays and organoclays Environmental Geochemistry and Health. 30: 479-488. PMID 18311589 DOI: 10.1007/s10653-007-9130-0  0.52
2008 Gu XZ, Zhang GY, Chen L, Dai RL, Yu YC. Persistence and dissipation of synthetic pyrethroid pesticides in red soils from the Yangtze River Delta area. Environmental Geochemistry and Health. 30: 67-77. PMID 17610026 DOI: 10.1007/s10653-007-9108-y  0.52
2007 Su Z, Huang Y, Gu X. Tissue-driven hypothesis with Gene Ontology (GO) analysis. Annals of Biomedical Engineering. 35: 1088-94. PMID 17372837 DOI: 10.1007/s10439-007-9269-y  0.4
2007 Gu X, Su Z. Tissue-driven hypothesis of genomic evolution and sequence-expression correlations. Proceedings of the National Academy of Sciences of the United States of America. 104: 2779-84. PMID 17301236 DOI: 10.1073/pnas.0610797104  0.4
2006 Akturk S, Gu X, Kimmel M, Trebino R. Extremely simple single-prism ultrashort- pulse compressor. Optics Express. 14: 10101-8. PMID 19529405  1
2006 Su Z, Wang J, Yu J, Huang X, Gu X. Evolution of alternative splicing after gene duplication. Genome Research. 16: 182-9. PMID 16365379 DOI: 10.1101/gr.4197006  0.4
2005 Akturk S, Gu X, Gabolde P, Trebino R. The general theory of first-order spatio-temporal distortions of Gaussian pulses and beams. Optics Express. 13: 8642-61. PMID 19498896 DOI: 10.1117/12.645107  1
2005 Gu X, Su Z. Web-based resources for comparative genomics. Human Genomics. 2: 187-90. PMID 16197736  0.4
2005 Gu X, Zhang Z, Huang W. Rapid evolution of expression and regulatory divergences after yeast gene duplication. Proceedings of the National Academy of Sciences of the United States of America. 102: 707-12. PMID 15647348 DOI: 10.1073/pnas.0409186102  0.4
2005 Gu X, Huang W, Xu D, Zhang H. GeneContent: software for whole-genome phylogenetic analysis. Bioinformatics (Oxford, England). 21: 1713-4. PMID 15598840 DOI: 10.1093/bioinformatics/bti208  0.4
2004 Akturk S, Gu X, Zeek E, Trebino R. Pulse-front tilt caused by spatial and temporal chirp. Optics Express. 12: 4399-410. PMID 19483989 DOI: 10.1364/OPEX.12.004399  1
2003 Gu X, Kimmel M, Shreenath A, Trebino R, Dudley J, Coen S, Windeler R. Experimental studies of the coherence of microstructure-fiber supercontinuum. Optics Express. 11: 2697-703. PMID 19471384  1
2003 Gu Z, Steinmetz LM, Gu X, Scharfe C, Davis RW, Li WH. Role of duplicate genes in genetic robustness against null mutations. Nature. 421: 63-6. PMID 12511954 DOI: 10.1038/nature01198  0.4
2002 Dudley J, Gu X, Xu L, Kimmel M, Zeek E, O'Shea P, Trebino R, Coen S, Windeler R. Cross-correlation frequency resolved optical gating analysis of broadband continuum generation in photonic crystal fiber: simulations and experiments. Optics Express. 10: 1215-21. PMID 19451982  1
2002 Gu X, Xu L, Kimmel M, Zeek E, O'Shea P, Shreenath AP, Trebino R, Windeler RS. Frequency-resolved optical gating and single-shot spectral measurements reveal fine structure in microstructure-fiber continuum. Optics Letters. 27: 1174-6. PMID 18026398  1
2002 Gu X, Huang W. Testing the parsimony test of genome duplications: a counterexample. Genome Research. 12: 1-2. PMID 11779825 DOI: 10.1101/gr.214402  0.4
2001 O'Shea P, Kimmel M, Gu X, Trebino R. Highly simplified device for ultrashort-pulse measurement. Optics Letters. 26: 932-4. PMID 18040496  1
2000 O'Shea P, Kimmel M, Gu X, Trebino R. Increased-bandwidth in ultrashort-pulse measurement using an angle-dithered nonlinear-optical crystal. Optics Express. 7: 342-9. PMID 19407885  1
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