| Year |
Citation |
Score |
| 2024 |
Zeng Y, Somers J, Bell HS, Dawe RK, Fowler JE, Nelms B, Gent JI. Potent pollen gene regulation by DNA glycosylases in maize. Biorxiv : the Preprint Server For Biology. PMID 38405940 DOI: 10.1101/2024.02.13.580204 |
0.34 |
|
| 2022 |
Gent JI, Higgins KM, Swentowsky KW, Fu FF, Zeng Y, Kim DW, Dawe RK, Springer NM, Anderson SN. The maize gene maternal derepression of r1 encodes a DNA glycosylase that demethylates DNA and reduces siRNA expression in the endosperm. The Plant Cell. PMID 35775949 DOI: 10.1093/plcell/koac199 |
0.364 |
|
| 2021 |
Li C, Gent JI, Xu H, Fu H, Russell SD, Sundaresan V. Resetting of the 24-nt siRNA landscape in rice zygotes. Genome Research. PMID 34949668 DOI: 10.1101/gr.275981.121 |
0.412 |
|
| 2021 |
Hufford MB, Seetharam AS, Woodhouse MR, Chougule KM, Ou S, Liu J, Ricci WA, Guo T, Olson A, Qiu Y, Della Coletta R, Tittes S, Hudson AI, Marand AP, Wei S, ... ... Gent JI, et al. De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes. Science (New York, N.Y.). 373: 655-662. PMID 34353948 DOI: 10.1126/science.abg5289 |
0.306 |
|
| 2020 |
Swentowsky KW, Gent JI, Lowry EG, Schubert V, Ran X, Tseng KF, Harkess AE, Qiu W, Dawe RK. Distinct kinesin motors drive two types of maize neocentromeres. Genes & Development. PMID 32820038 DOI: 10.1101/Gad.340679.120 |
0.386 |
|
| 2020 |
Liu J, Seetharam AS, Chougule K, Ou S, Swentowsky KW, Gent JI, Llaca V, Woodhouse MR, Manchanda N, Presting GG, Kudrna DA, Alabady M, Hirsch CN, Fengler KA, Ware D, et al. Gapless assembly of maize chromosomes using long-read technologies. Genome Biology. 21: 121. PMID 32434565 DOI: 10.1186/S13059-020-02029-9 |
0.336 |
|
| 2020 |
Li C, Xu H, Fu FF, Russell SD, Sundaresan V, Gent JI. Genome-wide redistribution of 24-nt siRNAs in rice gametes. Genome Research. PMID 31896557 DOI: 10.1101/Gr.253674.119 |
0.535 |
|
| 2018 |
Fu FF, Dawe RK, Gent JI. Loss of RNA-directed DNA Methylation in Maize Chromomethylase and DDM1-type Nucleosome Remodeler Mutants. The Plant Cell. PMID 29884624 DOI: 10.1105/Tpc.18.00053 |
0.506 |
|
| 2018 |
Dawe RK, Lowry EG, Gent JI, Stitzer MC, Swentowsky KW, Higgins DM, Ross-Ibarra J, Wallace JG, Kanizay LB, Alabady M, Qiu W, Tseng KF, Wang N, Gao Z, Birchler JA, et al. A Kinesin-14 Motor Activates Neocentromeres to Promote Meiotic Drive in Maize. Cell. PMID 29628142 DOI: 10.1016/J.Cell.2018.03.009 |
0.392 |
|
| 2017 |
Oka R, Zicola J, Weber B, Anderson SN, Hodgman C, Gent JI, Wesselink JJ, Springer NM, Hoefsloot HCJ, Turck F, Stam M. Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize. Genome Biology. 18: 137. PMID 28732548 DOI: 10.1186/S13059-017-1273-4 |
0.443 |
|
| 2017 |
Gent JI, Wang N, Dawe RK. Stable centromere positioning in diverse sequence contexts of complex and satellite centromeres of maize and wild relatives. Genome Biology. 18: 121. PMID 28637491 DOI: 10.1186/S13059-017-1249-4 |
0.397 |
|
| 2017 |
Jiao Y, Peluso P, Shi J, Liang T, Stitzer MC, Wang B, Campbell MS, Stein JC, Wei X, Chin CS, Guill K, Regulski M, Kumari S, Olson A, Gent J, et al. Improved maize reference genome with single-molecule technologies. Nature. PMID 28605751 DOI: 10.1038/Nature22971 |
0.402 |
|
| 2015 |
Zhao H, Zhu X, Wang K, Gent JI, Zhang W, Dawe RK, Jiang J. Gene Expression and Chromatin Modifications Associated with Maize Centromeres. G3 (Bethesda, Md.). PMID 26564952 DOI: 10.1534/G3.115.022764 |
0.437 |
|
| 2015 |
Li Q, Gent JI, Zynda G, Song J, Makarevitch I, Hirsch CD, Hirsch CN, Dawe RK, Madzima TF, McGinnis KM, Lisch D, Schmitz RJ, Vaughn MW, Springer NM. RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome. Proceedings of the National Academy of Sciences of the United States of America. PMID 26553984 DOI: 10.1073/Pnas.1514680112 |
0.53 |
|
| 2015 |
Gent JI, Wang K, Jiang J, Dawe RK. Stable Patterns of CENH3 Occupancy Through Maize Lineages Containing Genetically Similar Centromeres. Genetics. PMID 26063660 DOI: 10.1534/Genetics.115.177360 |
0.343 |
|
| 2014 |
Gent JI, Madzima TF, Bader R, Kent MR, Zhang X, Stam M, McGinnis KM, Dawe RK. Accessible DNA and relative depletion of H3K9me2 at maize loci undergoing RNA-directed DNA methylation. The Plant Cell. 26: 4903-17. PMID 25465407 DOI: 10.1105/Tpc.114.130427 |
0.602 |
|
| 2013 |
Gent JI, Ellis NA, Guo L, Harkess AE, Yao Y, Zhang X, Dawe RK. CHH islands: de novo DNA methylation in near-gene chromatin regulation in maize. Genome Research. 23: 628-37. PMID 23269663 DOI: 10.1101/Gr.146985.112 |
0.54 |
|
| 2012 |
Eichten SR, Ellis NA, Makarevitch I, Yeh CT, Gent JI, Guo L, McGinnis KM, Zhang X, Schnable PS, Vaughn MW, Dawe RK, Springer NM. Spreading of heterochromatin is limited to specific families of maize retrotransposons. Plos Genetics. 8: e1003127. PMID 23271981 DOI: 10.1371/Journal.Pgen.1003127 |
0.406 |
|
| 2012 |
Gent JI, Dawe RK. RNA as a structural and regulatory component of the centromere. Annual Review of Genetics. 46: 443-53. PMID 22974300 DOI: 10.1146/Annurev-Genet-110711-155419 |
0.55 |
|
| 2012 |
Gent JI, Dong Y, Jiang J, Dawe RK. Strong epigenetic similarity between maize centromeric and pericentromeric regions at the level of small RNAs, DNA methylation and H3 chromatin modifications. Nucleic Acids Research. 40: 1550-60. PMID 22058126 DOI: 10.1093/Nar/Gkr862 |
0.534 |
|
| 2011 |
Blanchard D, Parameswaran P, Lopez-Molina J, Gent J, Saynuk JF, Fire A. On the nature of in vivo requirements for rde-4 in RNAi and developmental pathways in C. elegans Rna Biology. 8: 458-467. PMID 21519199 DOI: 10.4161/Rna.8.3.14657 |
0.579 |
|
| 2011 |
Gent JI, Schneider KL, Topp CN, Rodriguez C, Presting GG, Dawe RK. Distinct influences of tandem repeats and retrotransposons on CENH3 nucleosome positioning. Epigenetics & Chromatin. 4: 3. PMID 21352520 DOI: 10.1186/1756-8935-4-3 |
0.378 |
|
| 2011 |
Lamm AT, Stadler MR, Zhang H, Gent JI, Fire AZ. Multimodal RNA-seq using single-strand, double-strand, and CircLigase-based capture yields a refined and extended description of the C. elegans transcriptome Genome Research. 21: 265-275. PMID 21177965 DOI: 10.1101/Gr.108845.110 |
0.619 |
|
| 2010 |
Gent JI, Lamm AT, Pavelec DM, Maniar JM, Parameswaran P, Tao L, Kennedy S, Fire AZ. Distinct Phases of siRNA Synthesis in an Endogenous RNAi Pathway in C. elegans Soma Molecular Cell. 37: 679-689. PMID 20116306 DOI: 10.1016/J.Molcel.2010.01.012 |
0.608 |
|
| 2009 |
Gent JI, Schvarzstein M, Villeneuve AM, Gu SG, Jantsch V, Fire AZ, Baudrimont A. A Caenorhabditis elegans RNA-directed RNA polymerase in sperm development and endogenous RNA interference Genetics. 183: 1297-1314. PMID 19805814 DOI: 10.1534/Genetics.109.109686 |
0.633 |
|
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