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Sahand Hormoz, Ph.D. - Publications

Affiliations: 
2011 Harvard University, Cambridge, MA, United States 
Area:
Fluid Mechanics
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8/41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Bowling S, Sritharan D, Osorio FG, Nguyen M, Cheung P, Rodriguez-Fraticelli A, Patel S, Yuan WC, Fujiwara Y, Li BE, Orkin SH, Hormoz S, Camargo FD. An Engineered CRISPR-Cas9 Mouse Line for Simultaneous Readout of Lineage Histories and Gene Expression Profiles in Single Cells. Cell. PMID 32413320 DOI: 10.1016/J.Cell.2020.04.048  0.303
2018 Park J, Dies M, Lin Y, Hormoz S, Smith-Unna SE, Quinodoz S, Hernández-Jiménez MJ, Garcia-Ojalvo J, Locke JCW, Elowitz MB. Molecular Time Sharing through Dynamic Pulsing in Single Cells. Cell Systems. PMID 29454936 DOI: 10.1016/J.Cels.2018.01.011  0.308
2016 Hormoz S, Singer ZS, Linton JM, Antebi YE, Shraiman BI, Elowitz MB. Inferring Cell-State Transition Dynamics from Lineage Trees and Endpoint Single-Cell Measurements. Cell Systems. 3: 419-433.e8. PMID 27883889 DOI: 10.1016/J.Cels.2016.10.015  0.311
2016 Frieda KL, Linton JM, Hormoz S, Choi J, Chow KK, Singer ZS, Budde MW, Elowitz MB, Cai L. Synthetic recording and in situ readout of lineage information in single cells. Nature. PMID 27869821 DOI: 10.1038/Nature20777  0.324
2015 Hormoz S, Desprat N, Shraiman BI. Inferring epigenetic dynamics from kin correlations. Proceedings of the National Academy of Sciences of the United States of America. 112: E2281-9. PMID 25902540 DOI: 10.1073/Pnas.1504407112  0.342
2013 Hormoz S, Brenner MP. Non-universal and non-singular asymptotics of interacting vortex filaments Procedia Iutam. 7: 97-106. DOI: 10.1016/J.Piutam.2013.03.012  0.491
2012 Hormoz S, Brenner MP. Absence of singular stretching of interacting vortex filaments Journal of Fluid Mechanics. 707: 191-204. DOI: 10.1017/Jfm.2012.270  0.499
2011 Hormoz S, Brenner MP. Design principles for self-assembly with short-range interactions Proceedings of the National Academy of Sciences of the United States of America. 108: 5193-5198. PMID 21383135 DOI: 10.1073/Pnas.1014094108  0.465
Low-probability matches (unlikely to be authored by this person)
2018 Rosenthal AZ, Qi Y, Hormoz S, Park J, Li SH, Elowitz MB. Metabolic interactions between dynamic bacterial subpopulations. Elife. 7. PMID 29809139 DOI: 10.7554/Elife.33099  0.292
2013 Hormoz S. Stem cell population asymmetry can reduce rate of replicative aging. Journal of Theoretical Biology. 331: 19-27. PMID 23623948 DOI: 10.1016/J.Jtbi.2013.04.018  0.29
2018 Rosenthal AZ, Qi Y, Hormoz S, Park J, Li SH, Elowitz MB. Author response: Metabolic interactions between dynamic bacterial subpopulations Elife. DOI: 10.7554/Elife.33099.028  0.276
2015 Hormoz S, Bhanot G, Biehl M, Bilal E, Meyer P, Norel R, Rhrissorrakrai K, Dayarian A. Inter-species inference of gene set enrichment in lung epithelial cells from proteomic and large transcriptomic datasets. Bioinformatics (Oxford, England). 31: 492-500. PMID 25152231 DOI: 10.1093/Bioinformatics/Btu569  0.267
2015 Biehl M, Sadowski P, Bhanot G, Bilal E, Dayarian A, Meyer P, Norel R, Rhrissorrakrai K, Zeller MD, Hormoz S. Inter-species prediction of protein phosphorylation in the sbv IMPROVER species translation challenge. Bioinformatics (Oxford, England). 31: 453-61. PMID 24994890 DOI: 10.1093/Bioinformatics/Btu407  0.263
2015 Dayarian A, Romero R, Wang Z, Biehl M, Bilal E, Hormoz S, Meyer P, Norel R, Rhrissorrakrai K, Bhanot G, Luo F, Tarca AL. Predicting protein phosphorylation from gene expression: top methods from the IMPROVER Species Translation Challenge. Bioinformatics (Oxford, England). 31: 462-70. PMID 25061067 DOI: 10.1093/Bioinformatics/Btu490  0.26
2013 Hormoz S. Quantum collapse and the second law of thermodynamics. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 87: 022129. PMID 23496481 DOI: 10.1103/Physreve.87.022129  0.247
2010 Hormoz S, Ramanathan S. Limits on vanadium oxide Mott metal-insulator transition field-effect transistors Solid-State Electronics. 54: 654-659. DOI: 10.1016/J.Sse.2010.01.006  0.246
2013 Hormoz S. Cross talk and interference enhance information capacity of a signaling pathway. Biophysical Journal. 104: 1170-80. PMID 23473500 DOI: 10.1016/J.Bpj.2013.01.033  0.242
2014 Fonda E, Meichle DP, Ouellette NT, Hormoz S, Lathrop DP. Direct observation of Kelvin waves excited by quantized vortex reconnection. Proceedings of the National Academy of Sciences of the United States of America. 111: 4707-10. PMID 24704878 DOI: 10.1073/Pnas.1312536110  0.224
2013 Hormoz S. Amino acid composition of proteins reduces deleterious impact of mutations. Scientific Reports. 3: 2919. PMID 24108121 DOI: 10.1038/Srep02919  0.211
2011 Van Nierop EA, Hormoz S, House KZ, Aziz MJ. Effect of absorption enthalpy on temperature-swing CO2 separation process performance Energy Procedia. 4: 1783-1790. DOI: 10.1016/J.Egypro.2011.02.054  0.208
2008 Belkin MA, Fan JA, Hormoz S, Capasso F, Khanna SP, Lachab M, Davies AG, Linfield EH. Terahertz quantum cascade lasers with copper metal-metal waveguides operating up to 178 K. Optics Express. 16: 3242-8. PMID 18542411 DOI: 10.1364/Oe.16.003242  0.202
2024 Weng C, Yu F, Yang D, Poeschla M, Liggett LA, Jones MG, Qiu X, Wahlster L, Caulier A, Hussmann JA, Schnell A, Yost KE, Koblan L, Martin-Rufino JD, Min J, ... ... Hormoz S, et al. Deciphering cell states and genealogies of human hematopoiesis. Nature. PMID 38253266 DOI: 10.1038/s41586-024-07066-z  0.193
2023 Sahay S, Adhikari S, Hormoz S, Chakrabarti S. An improved rhythmicity analysis method using Gaussian Processes detects cell-density dependent circadian oscillations in stem cells. Biorxiv : the Preprint Server For Biology. PMID 36993318 DOI: 10.1101/2023.03.21.533651  0.181
2021 Sritharan D, Wang S, Hormoz S. Computing the Riemannian curvature of image patch and single-cell RNA sequencing data manifolds using extrinsic differential geometry. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34272279 DOI: 10.1073/pnas.2100473118  0.164
2023 McNulty R, Sritharan D, Pahng SH, Meisch JP, Liu S, Brennan MA, Saxer G, Hormoz S, Rosenthal AZ. Probe-based bacterial single-cell RNA sequencing predicts toxin regulation. Nature Microbiology. PMID 37012420 DOI: 10.1038/s41564-023-01348-4  0.164
2023 Sahay S, Adhikari S, Hormoz S, Chakrabarti S. An improved rhythmicity analysis method using Gaussian Processes detects cell-density dependent circadian oscillations in stem cells. Bioinformatics (Oxford, England). PMID 37769241 DOI: 10.1093/bioinformatics/btad602  0.15
2022 Budjan C, Liu S, Ranga A, Gayen S, Pourquié O, Hormoz S. Paraxial mesoderm organoids model development of human somites. Elife. 11. PMID 35088712 DOI: 10.7554/eLife.68925  0.147
2022 Wang A, Zhang Q, Han Y, Megason S, Hormoz S, Mosaliganti KR, Lam JCK, Li VOK. A novel deep learning-based 3D cell segmentation framework for future image-based disease detection. Scientific Reports. 12: 342. PMID 35013443 DOI: 10.1038/s41598-021-04048-3  0.14
2021 Liu S, Nguyen M, Hormoz S. Integrating readout of somatic mutations in individual cells with single-cell transcriptional profiling. Star Protocols. 2: 100673. PMID 34337442 DOI: 10.1016/j.xpro.2021.100673  0.135
2022 Sevier SA, Hormoz S. Collective polymerase dynamics emerge from DNA supercoiling during transcription. Biophysical Journal. PMID 36171726 DOI: 10.1016/j.bpj.2022.09.026  0.134
2023 Muyas F, Sauer CM, Valle-Inclán JE, Li R, Rahbari R, Mitchell TJ, Hormoz S, Cortés-Ciriano I. De novo detection of somatic mutations in high-throughput single-cell profiling data sets. Nature Biotechnology. PMID 37414936 DOI: 10.1038/s41587-023-01863-z  0.133
2020 Bowling S, Sritharan D, Osorio FG, Nguyen M, Cheung P, Rodriguez-Fraticelli A, Patel S, Yuan WC, Fujiwara Y, Li BE, Orkin SH, Hormoz S, Camargo FD. An Engineered CRISPR-Cas9 Mouse Line for Simultaneous Readout of Lineage Histories and Gene Expression Profiles in Single Cells. Cell. 181: 1693-1694. PMID 32589959 DOI: 10.1016/j.cell.2020.06.018  0.122
2021 Van Egeren D, Kamaz B, Liu S, Nguyen M, Reilly CR, Kalyva M, DeAngelo DJ, Galinsky I, Wadleigh M, Winer ES, Luskin MR, Stone RM, Garcia JS, Hobbs GS, Michor F, ... ... Hormoz S, et al. Transcriptional differences between JAK2-V617F and wild-type bone marrow cells in patients with myeloproliferative neoplasms. Experimental Hematology. PMID 34921959 DOI: 10.1016/j.exphem.2021.12.364  0.111
2021 Van Egeren D, Escabi J, Nguyen M, Liu S, Reilly CR, Patel S, Kamaz B, Kalyva M, DeAngelo DJ, Galinsky I, Wadleigh M, Winer ES, Luskin MR, Stone RM, Garcia JS, ... ... Hormoz S, et al. Reconstructing the Lineage Histories and Differentiation Trajectories of Individual Cancer Cells in Myeloproliferative Neoplasms. Cell Stem Cell. PMID 33621486 DOI: 10.1016/j.stem.2021.02.001  0.101
2020 Hormoz S. Evaluation of Arai et al.: What Can Differences across Daughter Cells Tell Us about Stem Cell Renewal? Cell Systems. 11: 547-549. PMID 33333027 DOI: 10.1016/j.cels.2020.11.009  0.093
2020 Hormoz S. Evaluation of Arai et al.: What Can Differences across Daughter Cells Tell Us about Stem Cell Renewal? Cell Systems. 11: 547-549. PMID 33333027 DOI: 10.1016/j.cels.2020.11.009  0.093
2016 Brenner MP, Hormoz S, Pumir A. Potential singularity mechanism for the Euler equations Physical Review Fluids. 1. DOI: 10.1103/PhysRevFluids.1.084503  0.092
2012 Hormoz S, Widom B. Models of the hydrophobic attraction Proceedings of the International School of Physics "Enrico Fermi". 176: 1-10. DOI: 10.3254/978-1-61499-071-0-1  0.064
2008 Khanna SP, Belkin MA, Fan JA, Hormoz S, Lachab M, Capasso F, Davies AG, Linfield EH. Terahertz quantum cascade lasers operating up to 178 K with copper metal-metal waveguides 2008 Conference On Quantum Electronics and Laser Science Conference On Lasers and Electro-Optics, Cleo/Qels. DOI: 10.1109/CLEO.2008.4551298  0.058
2008 Belkin MA, Khanna SP, Fan JA, Hormoz S, Lachab M, Capasso F, Davies AG, Linfield EH. Terahertz frequency quantum cascade lasers operating up to 178 K with copper metal-metal waveguides 33rd International Conference On Infrared and Millimeter Waves and the 16th International Conference On Terahertz Electronics, 2008, Irmmw-Thz 2008. DOI: 10.1109/ICIMW.2008.4665866  0.057
2013 Mohsen S, Najmemolouk A, Ardebili Hasan E, Hormoz S, Mahmoud M, PIPER NC. Educational intervention on health related lifestyle changes among Iranian adolescents Iranian Journal of Public Health. 42: 172-181.  0.01
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