Hari Shroff, Ph.D. - Publications

Affiliations: 
Physics University of Maryland, College Park, College Park, MD 
 2006 University of California, Berkeley, Berkeley, CA 
Area:
structural characterization of nucleo-protein assemblies

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Christensen RP, Bokinsky A, Santella A, Wu Y, Marquina-Solis J, Guo M, Kovacevic I, Kumar A, Winter PW, Tashakkori N, McCreedy E, Liu H, McAuliffe M, Mohler W, Colon-Ramos DA, ... ... Shroff H, et al. Untwisting the Caenorhabditis elegans embryo. Elife. 4. PMID 26633880 DOI: 10.7554/eLife.10070  0.32
2015 Trcek T, Grosch M, York A, Shroff H, Lionnet T, Lehmann R. Drosophila germ granules are structured and contain homotypic mRNA clusters. Nature Communications. 6: 7962. PMID 26242323 DOI: 10.1038/ncomms8962  0.32
2015 Santella A, Catena R, Kovacevic I, Shah P, Yu Z, Marquina-Solis J, Kumar A, Wu Y, Schaff J, Colón-Ramos D, Shroff H, Mohler WA, Bao Z. WormGUIDES: an interactive single cell developmental atlas and tool for collaborative multidimensional data exploration. Bmc Bioinformatics. 16: 189. PMID 26051157 DOI: 10.1186/s12859-015-0627-8  0.32
2015 Winter PW, Chandris P, Fischer RS, Wu Y, Waterman CM, Shroff H. Incoherent structured illumination improves optical sectioning and contrast in multiphoton super-resolution microscopy. Optics Express. 23: 5327-34. PMID 25836564 DOI: 10.1364/OE.23.005327  0.32
2015 Temprine K, York AG, Shroff H. Three-dimensional photoactivated localization microscopy with genetically expressed probes. Methods in Molecular Biology (Clifton, N.J.). 1251: 231-61. PMID 25391803 DOI: 10.1007/978-1-4939-2080-8_13  0.32
2015 Christensen R, Bokinsky A, Santella A, Wu Y, Marquina J, Kovacevic I, Kumar A, Winter P, McCreedy E, Mohler W, Bao Z, Colón-Ramos D, Shroff H. An imaging and analysis toolset for the study of Caenorhabditis elegans neurodevelopment Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9334. DOI: 10.1117/12.2082394  0.32
2015 Vasalatiy O, Opina AC, Coble V, Patterson G, Shroff H, Swenson R. Synthesis of caged Q-rhodamine dye Optics and the Brain, Brain 2015 0.32
2015 Vasalatiy O, Opina AC, Coble V, Patterson G, Shroff H, Swenson R. Synthesis of caged Q-rhodamine dye Optical Trapping Applications, Ota 2015 0.32
2014 Winter PW, York AG, Nogare DD, Ingaramo M, Christensen R, Chitnis A, Patterson GH, Shroff H. Two-photon instant structured illumination microscopy improves the depth penetration of super-resolution imaging in thick scattering samples. Optica. 1: 181-191. PMID 25485291 DOI: 10.1364/OPTICA.1.000181  0.32
2014 Eswaramoorthy P, Winter PW, Wawrzusin P, York AG, Shroff H, Ramamurthi KS. Asymmetric division and differential gene expression during a bacterial developmental program requires DivIVA. Plos Genetics. 10: e1004526. PMID 25101664 DOI: 10.1371/journal.pgen.1004526  0.32
2014 Winter PW, Shroff H. Faster fluorescence microscopy: advances in high speed biological imaging. Current Opinion in Chemical Biology. 20: 46-53. PMID 24815857 DOI: 10.1016/j.cbpa.2014.04.008  0.32
2014 Ingaramo M, York AG, Wawrzusin P, Milberg O, Hong A, Weigert R, Shroff H, Patterson GH. Two-photon excitation improves multifocal structured illumination microscopy in thick scattering tissue. Proceedings of the National Academy of Sciences of the United States of America. 111: 5254-9. PMID 24706872 DOI: 10.1073/pnas.1314447111  0.32
2013 Zhao H, Casillas E, Shroff H, Patterson GH, Schuck P. Tools for the Quantitative Analysis of Sedimentation Boundaries Detected by Fluorescence Optical Analytical Ultracentrifugation Plos One. 8. PMID 24204779 DOI: 10.1371/journal.pone.0077245  0.32
2013 Wu Y, Wawrzusin P, Senseney J, Fischer RS, Christensen R, Santella A, York AG, Winter PW, Waterman CM, Bao Z, Colón-Ramos DA, McAuliffe M, Shroff H. Spatially isotropic four-dimensional imaging with dual-view plane illumination microscopy. Nature Biotechnology. 31: 1032-8. PMID 24108093 DOI: 10.1038/nbt.2713  0.32
2013 York AG, Chandris P, Nogare DD, Head J, Wawrzusin P, Fischer RS, Chitnis A, Shroff H. Instant super-resolution imaging in live cells and embryos via analog image processing. Nature Methods. 10: 1122-6. PMID 24097271 DOI: 10.1038/nmeth.2687  0.32
2013 Shroff H, White H, Betzig E. Photoactivated Localization Microscopy (PALM) of adhesion complexes. Current Protocols in Cell Biology / Editorial Board, Juan S. Bonifacino ... [Et Al.]. Unit4.21. PMID 23456603 DOI: 10.1002/0471143030.cb0421s58  0.32
2012 York AG, Parekh SH, Dalle Nogare D, Fischer RS, Temprine K, Mione M, Chitnis AB, Combs CA, Shroff H. Resolution doubling in live, multicellular organisms via multifocal structured illumination microscopy. Nature Methods. 9: 749-54. PMID 22581372 DOI: 10.1038/nmeth.2025  0.32
2011 Fischer RS, Wu Y, Kanchanawong P, Shroff H, Waterman CM. Microscopy in 3D: a biologist's toolbox. Trends in Cell Biology. 21: 682-91. PMID 22047760 DOI: 10.1016/j.tcb.2011.09.008  0.32
2011 York AG, Ghitani A, Vaziri A, Davidson MW, Shroff H. Confined activation and subdiffractive localization enables whole-cell PALM with genetically expressed probes. Nature Methods. 8: 327-33. PMID 21317909 DOI: 10.1038/nmeth.1571  0.32
2010 Frost NA, Shroff H, Kong H, Betzig E, Blanpied TA. Single-molecule discrimination of discrete perisynaptic and distributed sites of actin filament assembly within dendritic spines. Neuron. 67: 86-99. PMID 20624594 DOI: 10.1016/j.neuron.2010.05.026  0.32
2009 Greenfield D, McEvoy AL, Shroff H, Crooks GE, Wingreen NS, Betzig E, Liphardt J. Self-organization of the Escherichia coli chemotaxis network imaged with super-resolution light microscopy. Plos Biology. 7: e1000137. PMID 19547746 DOI: 10.1371/journal.pbio.1000137  0.32
2009 Vaziri A, Tang J, Shroff H, Shank C. Three-dimensional super-resolution imaging of thick biological samples Microscopy and Microanalysis. 15: 36-37. DOI: 10.1017/S1431927609092368  0.32
2009 Vaziri A, Tang J, Shroff H, Shank CV. Three-dimensional nanoscopy of biological samples Optics Infobase Conference Papers 0.32
2009 Vaziri A, Tang J, Shroff H, Shank CV. Multilayer and three-dimensional super-resolution imaging of thick biological samples Optics Infobase Conference Papers 0.32
2009 Vaziri A, Tang J, Shroff H, Shank CV. Three-dimensional nanoscopy of biological samples Optics Infobase Conference Papers 0.32
2008 Ji N, Shroff H, Zhong H, Betzig E. Advances in the speed and resolution of light microscopy. Current Opinion in Neurobiology. 18: 605-16. PMID 19375302 DOI: 10.1016/j.conb.2009.03.009  0.32
2008 Vaziri A, Tang J, Shroff H, Shank CV. Multilayer three-dimensional super resolution imaging of thick biological samples Proceedings of the National Academy of Sciences of the United States of America. 105: 20221-20226. PMID 19088193 DOI: 10.1073/pnas.0810636105  0.32
2008 Shroff H, White H, Betzig E. Photoactivated localization microscopy (PALM) of adhesion complexes. Current Protocols in Cell Biology / Editorial Board, Juan S. Bonifacino ... [Et Al.]. Unit 4.21. PMID 19085989 DOI: 10.1002/0471143030.cb0421s41  0.32
2008 Shroff H, Galbraith CG, Galbraith JA, Betzig E. Live-cell photoactivated localization microscopy of nanoscale adhesion dynamics. Nature Methods. 5: 417-23. PMID 18408726 DOI: 10.1038/nmeth.1202  0.32
2008 Manley S, Gillette JM, Patterson GH, Shroff H, Hess HF, Betzig E, Lippincott-Schwartz J. High-density mapping of single-molecule trajectories with photoactivated localization microscopy. Nature Methods. 5: 155-7. PMID 18193054 DOI: 10.1038/nmeth.1176  0.32
2008 Shroff H, Sivak D, Siegel JJ, McEvoy AL, Siu M, Spakowitz A, Geissler PL, Liphardt J. Optical measurement of mechanical forces inside short DNA loops. Biophysical Journal. 94: 2179-86. PMID 18065484 DOI: 10.1529/biophysj.107.114413  0.32
2008 Shroff H, Galbraith CG, Galbraith JA, White H, Gillette J, Olenych S, Davidson MW, Betzig E. Dual-color superresolution imaging using genetically expressed probes 2008 Conference On Quantum Electronics and Laser Science Conference On Lasers and Electro-Optics, Cleo/Qels. DOI: 10.1109/CLEO.2008.4551057  0.32
2007 Shroff H, Galbraith CG, Galbraith JA, White H, Gillette J, Olenych S, Davidson MW, Betzig E. Dual-color superresolution imaging of genetically expressed probes within individual adhesion complexes. Proceedings of the National Academy of Sciences of the United States of America. 104: 20308-13. PMID 18077327 DOI: 10.1073/pnas.0710517105  0.32
2005 Shroff H, Reinhard BM, Siu M, Agarwal H, Spakowitz A, Liphardt J. Biocompatible force sensor with optical readout and dimensions of 6 nm3. Nano Letters. 5: 1509-14. PMID 16178266 DOI: 10.1021/nl050875h  0.32
2003 McGraw CM, Shroff H, Khalil G, Callis JB. The phosphorescence microphone: A device for testing oxygen sensors and films Review of Scientific Instruments. 74: 5260-5266. DOI: 10.1063/1.1626009  0.32
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