Suliana Manley, Ph.D. - Publications

Affiliations: 
2004 Harvard University, Cambridge, MA, United States 
Area:
condensed matter, colloidal dispersions, rheology

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Archetti A, Glushkov E, Sieben C, Stroganov A, Radenovic A, Manley S. Waveguide-PAINT offers an open platform for large field-of-view super-resolution imaging. Nature Communications. 10: 1267. PMID 30894525 DOI: 10.1038/s41467-019-09247-1  0.48
2019 Donaldson-Collier MC, Sungalee S, Zufferey M, Tavernari D, Katanayeva N, Battistello E, Mina M, Douglass KM, Rey T, Raynaud F, Manley S, Ciriello G, Oricchio E. EZH2 oncogenic mutations drive epigenetic, transcriptional, and structural changes within chromatin domains. Nature Genetics. PMID 30692681 DOI: 10.1038/s41588-018-0338-y  0.48
2019 Callegari A, Sieben C, Benke A, Suter DM, Fierz B, Mazza D, Manley S. Single-molecule dynamics and genome-wide transcriptomics reveal that NF-kB (p65)-DNA binding times can be decoupled from transcriptional activation. Plos Genetics. 15: e1007891. PMID 30653501 DOI: 10.1371/journal.pgen.1007891  0.64
2018 Štefko M, Ottino B, Douglass KM, Manley S. Autonomous illumination control for localization microscopy. Optics Express. 26: 30882-30900. PMID 30469980  0.48
2018 Sieben C, Banterle N, Douglass KM, Gönczy P, Manley S. Multicolor single-particle reconstruction of protein complexes. Nature Methods. 15: 777-780. PMID 30275574 DOI: 10.1038/s41592-018-0140-x  0.48
2018 Lambert A, Vanhecke A, Archetti A, Holden S, Schaber F, Pincus Z, Laub MT, Goley E, Manley S. Constriction Rate Modulation Can Drive Cell Size Control and Homeostasis in C. crescentus. Iscience. 4: 180-189. PMID 30240739 DOI: 10.1016/j.isci.2018.05.020  0.48
2018 Sieben C, Douglass KM, Guichard P, Manley S. Super-resolution microscopy to decipher multi-molecular assemblies. Current Opinion in Structural Biology. 49: 169-176. PMID 29621666 DOI: 10.1016/j.sbi.2018.03.017  0.48
2017 Prouteau M, Desfosses A, Sieben C, Bourgoint C, Lydia Mozaffari N, Demurtas D, Mitra AK, Guichard P, Manley S, Loewith R. TORC1 organized in inhibited domains (TOROIDs) regulate TORC1 activity. Nature. PMID 28976958 DOI: 10.1038/nature24021  0.48
2017 Vancevska A, Douglass KM, Pfeiffer V, Manley S, Lingner J. The telomeric DNA damage response occurs in the absence of chromatin decompaction. Genes & Development. PMID 28381410 DOI: 10.1101/gad.294082.116  0.48
2016 Bergé M, Campagne S, Mignolet J, Holden S, Théraulaz L, Manley S, Allain FH, Viollier PH. Modularity and determinants of a (bi-)polarization control system from free-living and obligate intracellular bacteria. Elife. 5. PMID 28008852 DOI: 10.7554/eLife.20640  0.36
2016 Mignolet J, Holden S, Bergé M, Panis G, Eroglu E, Théraulaz L, Manley S, Viollier PH. Functional dichotomy and distinct nanoscale assemblies of a cell cycle-controlled bipolar zinc-finger regulator. Elife. 5. PMID 28008851 DOI: 10.7554/eLife.18647  0.36
2016 Deluz C, Friman ET, Strebinger D, Benke A, Raccaud M, Callegari A, Leleu M, Manley S, Suter DM. A role for mitotic bookmarking of SOX2 in pluripotency and differentiation. Genes & Development. PMID 27920086 DOI: 10.1101/gad.289256.116  0.64
2016 Douglass KM, Sieben C, Archetti A, Lambert A, Manley S. Super-resolution imaging of multiple cells by optimised flat-field epi-illumination. Nature Photonics. 10: 705-708. PMID 27818707 DOI: 10.1038/nphoton.2016.200  0.48
2016 Nasu Y, Benke A, Arakawa S, Yoshida GJ, Kawamura G, Manley S, Shimizu S, Ozawa T. In Situ Characterization of Bak Clusters Responsible for Cell Death Using Single Molecule Localization Microscopy. Scientific Reports. 6: 27505. PMID 27293178 DOI: 10.1038/srep27505  0.84
2016 Fabre PJ, Benke A, Manley S, Duboule D. Visualizing the HoxD Gene Cluster at the Nanoscale Level. Cold Spring Harbor Symposia On Quantitative Biology. PMID 26767994 DOI: 10.1101/sqb.2015.80.027177  0.64
2015 Carlini L, Holden SJ, Douglass KM, Manley S. Correction of a Depth-Dependent Lateral Distortion in 3D Super-Resolution Imaging. Plos One. 10: e0142949. PMID 26600467 DOI: 10.1371/journal.pone.0142949  0.84
2015 Fabre PJ, Benke A, Joye E, Nguyen Huynh TH, Manley S, Duboule D. Nanoscale spatial organization of the HoxD gene cluster in distinct transcriptional states. Proceedings of the National Academy of Sciences of the United States of America. 112: 13964-9. PMID 26504220 DOI: 10.1073/pnas.1517972112  0.84
2015 Sage D, Kirshner H, Pengo T, Stuurman N, Min J, Manley S, Unser M. Quantitative evaluation of software packages for single-molecule localization microscopy. Nature Methods. 12: 717-24. PMID 26076424 DOI: 10.1038/nmeth.3442  0.84
2015 Pengo T, Holden SJ, Manley S. PALMsiever: a tool to turn raw data into results for single-molecule localization microscopy. Bioinformatics (Oxford, England). 31: 797-8. PMID 25362091 DOI: 10.1093/bioinformatics/btu720  0.84
2015 Min J, Carlini L, Unser M, Manley S, Ye JC. Fast live cell imaging at nanometer scale using annihilating filter-based low-rank Hankel matrix approach Proceedings of Spie - the International Society For Optical Engineering. 9597. DOI: 10.1117/12.2187393  0.84
2014 Min J, Holden SJ, Carlini L, Unser M, Manley S, Ye JC. 3D high-density localization microscopy using hybrid astigmatic/ biplane imaging and sparse image reconstruction. Biomedical Optics Express. 5: 3935-48. PMID 26526603 DOI: 10.1364/BOE.5.003935  0.84
2014 Gunzenhäuser J, Wyss R, Manley S. A Quantitative Approach to Evaluate the Impact of Fluorescent Labeling on Membrane-Bound HIV-Gag Assembly by Titration of Unlabeled Proteins. Plos One. 9: e115095. PMID 25493438 DOI: 10.1371/journal.pone.0115095  0.84
2014 Min J, Vonesch C, Kirshner H, Carlini L, Olivier N, Holden S, Manley S, Ye JC, Unser M. FALCON: fast and unbiased reconstruction of high-density super-resolution microscopy data. Scientific Reports. 4: 4577. PMID 24694686 DOI: 10.1038/srep04577  0.84
2014 Holden SJ, Pengo T, Meibom KL, Fernandez Fernandez C, Collier J, Manley S. High throughput 3D super-resolution microscopy reveals Caulobacter crescentus in vivo Z-ring organization. Proceedings of the National Academy of Sciences of the United States of America. 111: 4566-71. PMID 24616530 DOI: 10.1073/pnas.1313368111  0.84
2014 Fitzpatrick JA, Inouye Y, Manley S, Moerner WE. From "There's Plenty of Room at the Bottom" to seeing what is actually there. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 15: 547-9. PMID 24590957 DOI: 10.1002/cphc.201400097  0.84
2014 Keller D, Orpinell M, Olivier N, Wachsmuth M, Mahen R, Wyss R, Hachet V, Ellenberg J, Manley S, Gönczy P. Mechanisms of HsSAS-6 assembly promoting centriole formation in human cells. The Journal of Cell Biology. 204: 697-712. PMID 24590172 DOI: 10.1083/jcb.201307049  0.84
2014 Carlini L, Benke A, Reymond L, Lukinavičius G, Manley S. Reduced dyes enhance single-molecule localization density for live superresolution imaging. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 15: 750-5. PMID 24554553 DOI: 10.1002/cphc.201301004  0.84
2014 Achurra P, Holden S, Pengo T, Manley S. Photoactivated localization microscopy for cellular imaging Neuromethods. 86: 87-111. DOI: 10.1007/978-1-62703-983-3-5  0.84
2013 Carlini L, Manley S. Live intracellular super-resolution imaging using site-specific stains. Acs Chemical Biology. 8: 2643-8. PMID 24079385 DOI: 10.1021/cb400467x  0.84
2013 Olivier N, Keller D, Gönczy P, Manley S. Resolution doubling in 3D-STORM imaging through improved buffers. Plos One. 8: e69004. PMID 23874848 DOI: 10.1371/journal.pone.0069004  0.84
2013 Olivier N, Keller D, Rajan VS, Gönczy P, Manley S. Simple buffers for 3D STORM microscopy. Biomedical Optics Express. 4: 885-99. PMID 23761850 DOI: 10.1364/BOE.4.000885  0.84
2013 Lukinavičius G, Umezawa K, Olivier N, Honigmann A, Yang G, Plass T, Mueller V, Reymond L, Corrêa IR, Luo ZG, Schultz C, Lemke EA, Heppenstall P, Eggeling C, Manley S, et al. A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins. Nature Chemistry. 5: 132-9. PMID 23344448 DOI: 10.1038/nchem.1546  0.84
2013 Min J, Vonesch C, Olivier N, Kirshner H, Manley S, Ye JC, Unser M. Continuous localization using sparsity constraints for high-density super-resolution microscopy Proceedings - International Symposium On Biomedical Imaging. 177-180. DOI: 10.1109/ISBI.2013.6556441  0.84
2012 Hoze N, Nair D, Hosy E, Sieben C, Manley S, Herrmann A, Sibarita JB, Choquet D, Holcman D. Heterogeneity of AMPA receptor trafficking and molecular interactions revealed by superresolution analysis of live cell imaging. Proceedings of the National Academy of Sciences of the United States of America. 109: 17052-7. PMID 23035245 DOI: 10.1073/pnas.1204589109  0.84
2012 Gunzenhäuser J, Olivier N, Pengo T, Manley S. Quantitative super-resolution imaging reveals protein stoichiometry and nanoscale morphology of assembling HIV-Gag virions. Nano Letters. 12: 4705-10. PMID 22906128 DOI: 10.1021/nl3021076  0.84
2012 Benke A, Olivier N, Gunzenhäuser J, Manley S. Multicolor single molecule tracking of stochastically active synthetic dyes. Nano Letters. 12: 2619-24. PMID 22519662 DOI: 10.1021/nl301018r  0.84
2012 Benke A, Manley S. Live-cell dSTORM of cellular DNA based on direct DNA labeling. Chembiochem : a European Journal of Chemical Biology. 13: 298-301. PMID 22213360 DOI: 10.1002/cbic.201100679  0.84
2012 Banala S, Maurel D, Manley S, Johnsson K. A caged, localizable rhodamine derivative for superresolution microscopy. Acs Chemical Biology. 7: 289-93. PMID 22026407 DOI: 10.1021/cb2002889  0.84
2012 Kirshner H, Pengo T, Olivier N, Sage D, Manley S, Unser M. A PSF-based approach to Biplane calibration in 3D super-resolution microscopy Proceedings - International Symposium On Biomedical Imaging. 1232-1235. DOI: 10.1109/ISBI.2012.6235784  0.84
2011 Manley S, Gunzenhäuser J, Olivier N. A starter kit for point-localization super-resolution imaging. Current Opinion in Chemical Biology. 15: 813-21. PMID 22119536 DOI: 10.1016/j.cbpa.2011.10.009  0.84
2011 Sherman E, Barr V, Manley S, Patterson G, Balagopalan L, Akpan I, Regan CK, Merrill RK, Sommers CL, Lippincott-Schwartz J, Samelson LE. Functional nanoscale organization of signaling molecules downstream of the T cell antigen receptor. Immunity. 35: 705-20. PMID 22055681 DOI: 10.1016/j.immuni.2011.10.004  0.84
2011 Burnette DT, Manley S, Sengupta P, Sougrat R, Davidson MW, Kachar B, Lippincott-Schwartz J. A role for actin arcs in the leading-edge advance of migrating cells. Nature Cell Biology. 13: 371-81. PMID 21423177 DOI: 10.1038/ncb2205  0.84
2010 Manley S, Gillette JM, Lippincott-Schwartz J. Single-particle tracking photoactivated localization microscopy for mapping single-molecule dynamics. Methods in Enzymology. 475: 109-20. PMID 20627155 DOI: 10.1016/S0076-6879(10)75005-9  0.84
2010 Patterson G, Davidson M, Manley S, Lippincott-Schwartz J. Superresolution imaging using single-molecule localization. Annual Review of Physical Chemistry. 61: 345-67. PMID 20055680 DOI: 10.1146/annurev.physchem.012809.103444  0.84
2010 Conrad JC, Wyss HM, Trappe V, Manley S, Miyazaki K, Kaufman LJ, Schofield AB, Reichman DR, Weitz DA. Arrested fluid-fluid phase separation in depletion systems: Implications of the characteristic length on gel formation and rheology Journal of Rheology. 54: 421-438. DOI: 10.1122/1.3314295  0.84
2009 Shtengel G, Galbraith JA, Galbraith CG, Lippincott-Schwartz J, Gillette JM, Manley S, Sougrat R, Waterman CM, Kanchanawong P, Davidson MW, Fetter RD, Hess HF. Interferometric fluorescent super-resolution microscopy resolves 3D cellular ultrastructure. Proceedings of the National Academy of Sciences of the United States of America. 106: 3125-30. PMID 19202073 DOI: 10.1073/pnas.0813131106  0.84
2009 Subach FV, Patterson GH, Manley S, Gillette JM, Lippincott-Schwartz J, Verkhusha VV. Photoactivatable mCherry for high-resolution two-color fluorescence microscopy. Nature Methods. 6: 153-9. PMID 19169259 DOI: 10.1038/nmeth.1298  0.84
2009 Lippincott-Schwartz J, Manley S. Putting super-resolution fluorescence microscopy to work. Nature Methods. 6: 21-3. PMID 19116610 DOI: 10.1038/nmeth.f.233  0.84
2008 Manley S, Gordon VD. Making giant unilamellar vesicles via hydration of a lipid film. Current Protocols in Cell Biology / Editorial Board, Juan S. Bonifacino ... [Et Al.]. Unit 24.3. PMID 18819090 DOI: 10.1002/0471143030.cb2403s40  0.84
2008 Manley S, Horton MR, Lecszynski S, Gast AP. Sorting of streptavidin protein coats on phase-separating model membranes. Biophysical Journal. 95: 2301-7. PMID 18502811 DOI: 10.1529/biophysj.107.124024  0.84
2008 Manley S, Gillette JM, Patterson GH, Shroff H, Hess HF, Betzig E, Lippincott-Schwartz J. High-density mapping of single-molecule trajectories with photoactivated localization microscopy. Nature Methods. 5: 155-7. PMID 18193054 DOI: 10.1038/nmeth.1176  0.84
2007 Bailey AE, Poon WC, Christianson RJ, Schofield AB, Gasser U, Prasad V, Manley S, Segre PN, Cipelletti L, Meyer WV, Doherty MP, Sankaran S, Jankovsky AL, Shiley WL, Bowen JP, et al. Spinodal decomposition in a model colloid-polymer mixture in microgravity. Physical Review Letters. 99: 205701. PMID 18233160 DOI: 10.1103/PhysRevLett.99.205701  0.84
2007 Horton MR, Manley S, Arevalo SR, Lobkovsky AE, Gast AP. Crystalline protein domains and lipid bilayer vesicle shape transformations. The Journal of Physical Chemistry. B. 111: 880-5. PMID 17249832 DOI: 10.1021/jp0660987  0.84
2006 Popescu G, Ikeda T, Goda K, Best-Popescu CA, Laposata M, Manley S, Dasari RR, Badizadegan K, Feld MS. Optical measurement of cell membrane tension. Physical Review Letters. 97: 218101. PMID 17155774 DOI: 10.1103/PhysRevLett.97.218101  0.84
2005 Manley S, Wyss HM, Miyazaki K, Conrad JC, Trappe V, Kaufman LJ, Reichman DR, Weitz DA. Glasslike arrest in spinodal decomposition as a route to colloidal gelation. Physical Review Letters. 95: 238302. PMID 16384352 DOI: 10.1103/PhysRevLett.95.238302  0.84
2005 Manley S, Davidovitch B, Davies NR, Cipelletti L, Bailey AE, Christianson RJ, Gasser U, Prasad V, Segre PN, Doherty MP, Sankaran S, Jankovsky AL, Shiley B, Bowen J, Eggers J, et al. Time-dependent strength of colloidal gels. Physical Review Letters. 95: 048302. PMID 16090846 DOI: 10.1103/PhysRevLett.95.048302  0.84
2005 Manley S, Skotheim JM, Mahadevan L, Weitz DA. Gravitational collapse of colloidal gels. Physical Review Letters. 94: 218302. PMID 16090356 DOI: 10.1103/PhysRevLett.94.218302  0.84
2004 Manley S, Cipelletti L, Trappe V, Bailey AE, Christianson RJ, Gasser U, Prasad V, Segre PN, Doherty MP, Sankaran S, Jankovsky AL, Shiley B, Bowen J, Eggers J, Kurta C, et al. Limits to gelation in colloidal aggregation. Physical Review Letters. 93: 108302. PMID 15447462 DOI: 10.1103/PhysRevLett.93.108302  0.84
2003 Cipelletti L, Ramos L, Manley S, Pitard E, Weitz DA, Pashkovski EE, Johansson M. Universal non-diffusive slow dynamics in aging soft matter. Faraday Discussions. 123: 237-51; discussion 3. PMID 12638864  0.84
2002 Tee SY, Mucha PJ, Cipelletti L, Manley S, Brenner MP, Segre PN, Weitz DA. Nonuniversal velocity fluctuations of sedimenting particles. Physical Review Letters. 89: 054501. PMID 12144444 DOI: 10.1103/PhysRevLett.89.054501  0.44
2002 Tee SY, Mucha PJ, Cipelletti L, Manley S, Brenner MP, Segre PN, Weitz DA. Nonuniversal velocity fluctuations of sedimenting particles Physical Review Letters. 89: 054501/1-054501/4.  0.84
2001 Sankaran S, Gasser U, Manley S, Valentine M, Prasad V, Rudhardt D, Bailey A, Dinsmore A, Segre P, Doherty M, Week ER, Pusey PN, Weitz DA. Physics of colloids in space-2 (PCS-2) 2001 Conference and Exhibit On International Space Station Utilization 0.84
2000 Cipelletti L, Manley S, Ball RC, Weitz DA. Universal aging features in the restructuring of fractal colloidal gels. Physical Review Letters. 84: 2275-8. PMID 11017262 DOI: 10.1103/PhysRevLett.84.2275  0.84
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