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Sanjeevi Sivasankar, Ph.D. - Publications

Affiliations: 
2008-2018 Iowa State University, Ames, IA, United States 
 2018- University of California, Davis, Davis, CA 
Area:
Resolving biophysical mechanisms by which cells sense and respond to mechanical stimuli
Website:
http://sivasankar.physics.iastate.edu/
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55 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Xie B, Xu S, Schecterson L, Gumbiner BM, Sivasankar S. Strengthening E-cadherin adhesion via antibody-mediated binding stabilization. Structure (London, England : 1993). PMID 38052206 DOI: 10.1016/j.str.2023.11.002  0.409
2023 Xie B, Xu S, Schecterson L, Gumbiner BM, Sivasankar S. Strengthening E-cadherin adhesion via antibody mediated binding stabilization. Biorxiv : the Preprint Server For Biology. PMID 37461464 DOI: 10.1101/2023.07.04.547716  0.409
2023 Sivasankar S, Xie B. Engineering the Interactions of Classical Cadherin Cell-Cell Adhesion Proteins. Journal of Immunology (Baltimore, Md. : 1950). 211: 343-349. PMID 37459190 DOI: 10.4049/jimmunol.2300098  0.407
2023 Shome S, Jia K, Sivasankar S, Jernigan RL. Characterizing Interactions in E-cadherin Assemblages. Biophysical Journal. PMID 37345249 DOI: 10.1016/j.bpj.2023.06.009  0.333
2023 Priest AV, Sivasankar S. Characterizing the Biophysical Properties of Adhesive Proteins in Live Cells Using Single-Molecule Atomic Force Microscopy. Methods in Molecular Biology (Clifton, N.J.). 2600: 63-77. PMID 36587090 DOI: 10.1007/978-1-0716-2851-5_4  0.602
2022 Xie B, Maker A, Priest AV, Dranow DM, Phan JN, Edwards TE, Staker BL, Myler PJ, Gumbiner BM, Sivasankar S. Molecular mechanism for strengthening E-cadherin adhesion using a monoclonal antibody. Proceedings of the National Academy of Sciences of the United States of America. 119: e2204473119. PMID 35921442 DOI: 10.1073/pnas.2204473119  0.383
2022 Priest AV, Koirala R, Sivasankar S. Cadherins can dimerize via asymmetric interactions. Febs Letters. PMID 35532156 DOI: 10.1002/1873-3468.14373  0.462
2021 Koirala R, Priest AV, Yen CF, Cheah JS, Pannekoek WJ, Gloerich M, Yamada S, Sivasankar S. Inside-out regulation of E-cadherin conformation and adhesion. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34301871 DOI: 10.1073/pnas.2104090118  0.472
2020 Schmidt P, Lajoie J, Sivasankar S. Robust scan synchronized force-fluorescence imaging. Ultramicroscopy. 221: 113165. PMID 33352414 DOI: 10.1016/j.ultramic.2020.113165  0.348
2020 Shafraz O, Xie B, Yamada S, Sivasankar S. Mapping transmembrane binding partners for E-cadherin ectodomains. Proceedings of the National Academy of Sciences of the United States of America. PMID 33229577 DOI: 10.1073/pnas.2010209117  0.362
2020 Tavakoli M, Jazani S, Sgouralis I, Shafraz OM, Sivasankar S, Donaphon B, Levitus M, Pressé S. Pitching Single-Focus Confocal Data Analysis One Photon at a Time with Bayesian Nonparametrics Physical Review X. 10. DOI: 10.1103/Physrevx.10.011021  0.322
2020 Koirala R, Priest AV, Yamada S, Gloerich M, Sivasankar S. Inside-out Regulation of Cadherin Adhesion Biophysical Journal. 118: 465a. DOI: 10.1016/J.Bpj.2019.11.2584  0.409
2019 Priest AV, Koirala R, Sivasankar S. Single-molecule studies of classical and desmosomal cadherin adhesion. Current Opinion in Biomedical Engineering. 12: 43-50. PMID 31742239 DOI: 10.1016/J.Cobme.2019.08.006  0.504
2018 Schmidt PD, Reichert BH, Lajoie JG, Sivasankar S. Method for high frequency tracking and sub-nm sample stabilization in single molecule fluorescence microscopy. Scientific Reports. 8: 13912. PMID 30224660 DOI: 10.1016/J.Bpj.2018.11.744  0.362
2018 Shafraz O, Rübsam M, Stahley SN, Caldara A, Kowalczyk AP, Niessen CM, Sivasankar S. E-cadherin binds to desmoglein to facilitate desmosome assembly. Elife. 7. PMID 29999492 DOI: 10.7554/Elife.37629  0.515
2018 Yen CF, Sivasankar S. Improving estimation of kinetic parameters in dynamic force spectroscopy using cluster analysis. The Journal of Chemical Physics. 148: 123301. PMID 29604850 DOI: 10.1063/1.5001325  0.364
2018 Shafraz O, Rübsam M, Stahley SN, Caldara AL, Kowalczyk AP, Niessen CM, Sivasankar S. Author response: E-cadherin binds to desmoglein to facilitate desmosome assembly Elife. DOI: 10.7554/Elife.37629.013  0.311
2018 Ruebsam M, Shafraz O, Stanley S, Kowalczyk A, Niessen C, Sivasankar S. 870 E-cadherin binds desmoglein to facilitate desmosome assembly Journal of Investigative Dermatology. 138: S148. DOI: 10.1016/J.Jid.2018.03.881  0.323
2018 Priest AV, Koirala R, Yen C, Sivasankar S. Biophysics of Mechanosensitive Cadherin Adhesion and its Regulation Biophysical Journal. 114: 322a. DOI: 10.1016/J.Bpj.2017.11.1807  0.419
2017 Yen CF, Sivasankar S. Minimizing open-loop piezoactuator nonlinearity artifacts in atomic force microscope measurements. Journal of Vacuum Science and Technology. B, Nanotechnology & Microelectronics : Materials, Processing, Measurement, & Phenomena : Jvst B. 35: 053201. PMID 29075581 DOI: 10.1116/1.4994315  0.416
2017 Vae Priest A, Shafraz O, Sivasankar S. Biophysical basis of cadherin mediated cell-cell adhesion. Experimental Cell Research. PMID 28300566 DOI: 10.1016/J.Yexcr.2017.03.015  0.527
2017 Manibog K, Yen CF, Sivasankar S. Measuring Force-Induced Dissociation Kinetics of Protein Complexes Using Single-Molecule Atomic Force Microscopy. Methods in Enzymology. 582: 297-320. PMID 28062039 DOI: 10.1016/Bs.Mie.2016.08.009  0.834
2016 Manibog K, Sankar K, Kim SA, Zhang Y, Jernigan RL, Sivasankar S. Molecular determinants of cadherin ideal bond formation: Conformation-dependent unbinding on a multidimensional landscape. Proceedings of the National Academy of Sciences of the United States of America. PMID 27621473 DOI: 10.1073/Pnas.1604012113  0.843
2016 Yen CF, Harischandra DS, Kanthasamy A, Sivasankar S. Copper-induced structural conversion templates prion protein oligomerization and neurotoxicity. Science Advances. 2: e1600014. PMID 27419232 DOI: 10.1126/Sciadv.1600014  0.383
2016 Sivasankar S, Yen C, Harischandra DS, Kanthasamy A. Resolving the Structural Conversion, Aggregation and Neurotoxicity of Prion Proteins at the Single Molecule Level Biophysical Journal. 110: 399a. DOI: 10.1016/J.Bpj.2015.11.2154  0.4
2015 Manibog K, Kim S, Sivasankar S. Cadherin Conformational Shuttling Captured Using Single Molecule Atomic Force Microscopy Biophysical Journal. 108: 168a. DOI: 10.1016/J.Bpj.2014.11.927  0.841
2014 Manibog K, Li H, Rakshit S, Sivasankar S. Resolving the molecular mechanism of cadherin catch bond formation. Nature Communications. 5: 3941. PMID 24887573 DOI: 10.1038/Ncomms4941  0.84
2014 Lowndes M, Rakshit S, Shafraz O, Borghi N, Harmon RM, Green KJ, Sivasankar S, Nelson WJ. Different roles of cadherins in the assembly and structural integrity of the desmosome complex. Journal of Cell Science. 127: 2339-50. PMID 24610950 DOI: 10.1242/Jcs.146316  0.793
2014 Rakshit S, Sivasankar S. Biomechanics of cell adhesion: how force regulates the lifetime of adhesive bonds at the single molecule level. Physical Chemistry Chemical Physics : Pccp. 16: 2211-23. PMID 24419646 DOI: 10.1039/C3Cp53963F  0.823
2014 Manibog K, Li H, Rakshit S, Sivasankar S. Resolving the Molecular Determinants of Cadherin Catch Bond Formation Biophysical Journal. 106: 450a. DOI: 10.1016/J.Bpj.2013.11.2552  0.835
2014 Yen C, Sivasankar S. Single Molecule Characterization of the Role of Divalent Ions in Prion Protein Aggregation Biophysical Journal. 106: 388a. DOI: 10.1016/J.Bpj.2013.11.2196  0.372
2014 Shafraz O, Rakshit S, Lowndes M, Nelson WJ, Sivasankar S. Characterizing the Interaction of Desmosomal Cadherins at Single Molecule Level Biophysical Journal. 106: 388a. DOI: 10.1016/J.Bpj.2013.11.2195  0.824
2013 Sivasankar S. Tuning the kinetics of cadherin adhesion. The Journal of Investigative Dermatology. 133: 2318-23. PMID 23812234 DOI: 10.1038/Jid.2013.229  0.653
2013 Manibog K, Li H, Rakshit S, Sivasankar S. Resolving Cadherin Catch Bond Formation at the Single Molecule Level Biophysical Journal. 104: 168a. DOI: 10.1016/J.Bpj.2012.11.946  0.844
2012 Rakshit S, Zhang Y, Manibog K, Shafraz O, Sivasankar S. Ideal, catch, and slip bonds in cadherin adhesion. Proceedings of the National Academy of Sciences of the United States of America. 109: 18815-20. PMID 23112161 DOI: 10.1073/Pnas.1208349109  0.837
2012 Leckband D, Sivasankar S. Cadherin recognition and adhesion. Current Opinion in Cell Biology. 24: 620-7. PMID 22770731 DOI: 10.1016/J.Ceb.2012.05.014  0.676
2012 Li H, Yen CF, Sivasankar S. Fluorescence axial localization with nanometer accuracy and precision. Nano Letters. 12: 3731-5. PMID 22703235 DOI: 10.1021/Nl301542C  0.344
2012 Leckband D, Sivasankar S. Biophysics of cadherin adhesion. Sub-Cellular Biochemistry. 60: 63-88. PMID 22674068 DOI: 10.1007/978-94-007-4186-7_4  0.629
2012 Rakshit S, Zhang Y, Manibog K, Shafraz OL, Sivasankar S. Single Molecule Measurements of Catch Bond Formation in Cadherin Cell-Adhesion Proteins Biophysical Journal. 102: 12a. DOI: 10.1016/J.Bpj.2011.11.089  0.821
2011 Choi CL, Li H, Olson AC, Jain PK, Sivasankar S, Alivisatos AP. Spatially indirect emission in a luminescent nanocrystal molecule. Nano Letters. 11: 2358-62. PMID 21595450 DOI: 10.1021/Nl2007032  0.329
2011 Rakshit S, Sivasankar S. Cross-linking of a charged polysaccharide using polyions as electrostatic staples Soft Matter. 7: 2348-2351. DOI: 10.1039/C0Sm01309A  0.712
2011 Rakshit S, Lowndes M, Manibog K, Nelson WJ, Sivasankar S. Resolving Desmosomal Cadherin Interactions at the Single Molecule Level Biophysical Journal. 100: 482a. DOI: 10.1016/J.Bpj.2010.12.2823  0.824
2011 Li H, Yen C, Sivasankar S. Simultaneous AFM Force Spectroscopy and FRET Measurements on Single Biological Molecules Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.1040  0.553
2010 Rakshit S, Sivasankar S. Electrostatic Switching of Polysaccharide Conformation Probed at the Single Molecule Level Biophysical Journal. 98: 186a. DOI: 10.1016/J.Bpj.2009.12.996  0.79
2009 Sivasankar S, Zhang Y, Nelson WJ, Chu S. Characterizing the initial encounter complex in cadherin adhesion. Structure (London, England : 1993). 17: 1075-81. PMID 19646884 DOI: 10.1016/J.Str.2009.06.012  0.705
2009 Sivasankar S, Chu S. Nanoparticle-mediated nonfluorescent bonding of microspheres to atomic force microscope cantilevers and imaging fluorescence from bonded cantilevers with single molecule sensitivity. Nano Letters. 9: 2120-4. PMID 19435383 DOI: 10.1021/Nl900616Y  0.598
2009 Zhang Y, Sivasankar S, Nelson WJ, Chu S. Resolving cadherin interactions and binding cooperativity at the single-molecule level. Proceedings of the National Academy of Sciences of the United States of America. 106: 109-14. PMID 19114658 DOI: 10.1073/pnas.0811350106  0.638
2009 Sivasankar S, Zhang Y, Nelson WJ, Chu S. Resolving Cadherin Interactions at the Single Molecule Level Biophysical Journal. 96: 383a. DOI: 10.1016/J.Bpj.2008.12.2873  0.662
2007 Sivasankar S, Chu S. Optical bonding using silica nanoparticle sol-gel chemistry. Nano Letters. 7: 3031-4. PMID 17854226 DOI: 10.1021/Nl071492H  0.541
2001 Sivasankar S, Gumbiner B, Leckband D. Direct measurements of multiple adhesive alignments and unbinding trajectories between cadherin extracellular domains. Biophysical Journal. 80: 1758-68. PMID 11259289 DOI: 10.1016/S0006-3495(01)76146-2  0.696
2000 Leckband D, Sivasankar S. Mechanism of homophilic cadherin adhesion. Current Opinion in Cell Biology. 12: 587-92. PMID 10978894 DOI: 10.1016/S0955-0674(00)00136-8  0.678
1999 Sivasankar S, Brieher W, Lavrik N, Gumbiner B, Leckband D. Direct molecular force measurements of multiple adhesive interactions between cadherin ectodomains. Proceedings of the National Academy of Sciences of the United States of America. 96: 11820-4. PMID 10518534 DOI: 10.1073/Pnas.96.21.11820  0.706
1999 Leckband D, Sivasankar S. Forces controlling protein interactions: Theory and experiment Colloids and Surfaces B: Biointerfaces. 14: 83-97. DOI: 10.1016/S0927-7765(99)00027-2  0.636
1999 Leckband D, Sivasankar S, Brieher W, Lavrik N, Gumbiner B. Unusual mechanism controls the adhesive failure of bonds between cadherin extracellular domains Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 2: 1342.  0.352
1998 Sivasankar S, Subramaniam S, Leckband D. Direct molecular level measurements of the electrostatic properties of a protein surface. Proceedings of the National Academy of Sciences of the United States of America. 95: 12961-6. PMID 9789023 DOI: 10.1073/Pnas.95.22.12961  0.623
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