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Joshua R. Porter, Ph.D. - Publications

Affiliations: 
2012 Johns Hopkins University, Baltimore, MD 
Area:
oxygen sensing, sterol sensing, hypoxic response
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9 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Koh WS, Porter JR, Batchelor E. Tuning of mRNA stability through altering 3'-UTR sequences generates distinct output expression in a synthetic circuit driven by p53 oscillations. Scientific Reports. 9: 5976. PMID 30979970 DOI: 10.1038/S41598-019-42509-Y  0.344
2019 Hanson RL, Porter JR, Batchelor E. Protein stability of p53 targets determines their temporal expression dynamics in response to p53 pulsing. The Journal of Cell Biology. PMID 30745421 DOI: 10.1083/Jcb.201803063  0.302
2017 Porter JR, Fisher BE, Baranello L, Liu JC, Kambach DM, Nie Z, Koh WS, Luo J, Stommel JM, Levens D, Batchelor E. Global Inhibition with Specific Activation: How p53 and MYC Redistribute the Transcriptome in the DNA Double-Strand Break Response. Molecular Cell. PMID 28867293 DOI: 10.1016/J.Molcel.2017.07.028  0.317
2016 Porter JR, Fisher BE, Batchelor E. p53 Pulses Diversify Target Gene Expression Dynamics in an mRNA Half-Life-Dependent Manner and Delineate Co-regulated Target Gene Subnetworks. Cell Systems. 2: 272-82. PMID 27135539 DOI: 10.1016/J.Cels.2016.03.006  0.301
2015 Porter JR, Batchelor E. Using computational modeling and experimental synthetic perturbations to probe biological circuits. Methods in Molecular Biology (Clifton, N.J.). 1244: 259-76. PMID 25487101 DOI: 10.1007/978-1-4939-1878-2_12  0.326
2012 Porter JR, Lee CY, Espenshade PJ, Iglesias PA. Regulation of SREBP during hypoxia requires Ofd1-mediated control of both DNA binding and degradation. Molecular Biology of the Cell. 23: 3764-74. PMID 22833559 DOI: 10.1091/Mbc.E12-06-0451  0.65
2012 Porter JR, Burg JS, Espenshade PJ, Iglesias PA. Identifying a static nonlinear structure in a biological system using noisy, sparse data. Journal of Theoretical Biology. 300: 232-41. PMID 22310068 DOI: 10.1016/J.Jtbi.2012.01.037  0.632
2011 Porter JR, Iglesias PA, Burg JS, Espenshade PJ. Overcoming data limitations to identify a static nonlinearity in a biological signaling cascade 2011 45th Annual Conference On Information Sciences and Systems, Ciss 2011. DOI: 10.1109/CISS.2011.5766151  0.637
2010 Porter JR, Burg JS, Espenshade PJ, Iglesias PA. Ergosterol regulates sterol regulatory element binding protein (SREBP) cleavage in fission yeast. The Journal of Biological Chemistry. 285: 41051-61. PMID 20959444 DOI: 10.1074/Jbc.M110.144337  0.632
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