| Year |
Citation |
Score |
| 2023 |
Dorkenwald S, Li PH, Januszewski M, Berger DR, Maitin-Shepard J, Bodor AL, Collman F, Schneider-Mizell CM, da Costa NM, Lichtman JW, Jain V. Multi-layered maps of neuropil with segmentation-guided contrastive learning. Nature Methods. PMID 37985712 DOI: 10.1038/s41592-023-02059-8 |
0.54 |
|
| 2023 |
Han X, Li PH, Wang S, Sanchez M, Aggarwal S, Blakely T, Schalek R, Meirovitch Y, Lin Z, Berger D, Wu Y, Aly F, Bay S, Delatour B, LaFaye P, et al. A large-scale volumetric correlated light and electron microscopy study localizes Alzheimer's disease-related molecules in the hippocampus. Biorxiv : the Preprint Server For Biology. PMID 37961104 DOI: 10.1101/2023.10.24.563674 |
0.774 |
|
| 2023 |
Wu JY, Cho SJ, Descant K, Li PH, Shapson-Coe A, Januszewski M, Berger DR, Meyer C, Casingal C, Huda A, Liu J, Ghashghaei T, Brenman M, Jiang M, Scarborough J, et al. Mapping of neuronal and glial primary cilia contactome and connectome in the human cerebral cortex. Neuron. PMID 37898123 DOI: 10.1016/j.neuron.2023.09.032 |
0.513 |
|
| 2023 |
Lu X, Wu Y, Schalek RL, Meirovitch Y, Berger DR, Lichtman JW. A Scalable Staining Strategy for Whole-Brain Connectomics. Biorxiv : the Preprint Server For Biology. PMID 37808722 DOI: 10.1101/2023.09.26.558265 |
0.764 |
|
| 2023 |
Lichtman J, Han X, Lu X, Li P, Wang S, Schalek R, Meirovitch Y, Lin Z, Adhinarta J, Berger D, Wu Y, Fang T, Meral E, Asraf S, Ploegh H, et al. Multiplexed volumetric CLEM enabled by antibody derivatives provides new insights into the cytology of the mouse cerebellar cortex. Research Square. PMID 37461609 DOI: 10.21203/rs.3.rs-3121892/v1 |
0.766 |
|
| 2023 |
Bidel F, Meirovitch Y, Schalek RL, Lu X, Pavarino EC, Yang F, Peleg A, Wu Y, Shomrat T, Berger DR, Shaked A, Lichtman JW, Hochner B. Connectomics of the vertical lobe provides insight into conserved and novel principles of a memory acquisition network. Elife. 12. PMID 37410519 DOI: 10.7554/eLife.84257 |
0.778 |
|
| 2023 |
Han X, Lu X, Li PH, Wang S, Schalek R, Meirovitch Y, Lin Z, Adhinarta J, Berger D, Wu Y, Fang T, Meral ES, Asraf S, Ploegh H, Pfister H, et al. Multiplexed Volumetric CLEM enabled by antibody derivatives provides new insights into the cytology of the mouse cerebellar cortex. Biorxiv : the Preprint Server For Biology. PMID 37292964 DOI: 10.1101/2023.05.20.540091 |
0.77 |
|
| 2022 |
Mulcahy B, Witvliet DK, Mitchell J, Schalek R, Berger DR, Wu Y, Holmyard D, Lu Y, Ahamed T, Samuel ADT, Chisholm AD, Lichtman JW, Zhen M. Post-embryonic remodeling of the C. elegans motor circuit. Current Biology : Cb. PMID 36283410 DOI: 10.1016/j.cub.2022.09.065 |
0.638 |
|
| 2021 |
Huang SY, Witzel T, Keil B, Scholz A, Davids M, Dietz P, Rummert E, Ramb R, Kirsch JE, Yendiki A, Fan Q, Tian Q, Ramos-Llordén G, Lee HH, Nummenmaa A, ... ... Berger D, et al. Connectome 2.0: Developing the next-generation ultra-high gradient strength human MRI scanner for bridging studies of the micro-, meso- and macro-connectome. Neuroimage. 118530. PMID 34464739 DOI: 10.1016/j.neuroimage.2021.118530 |
0.51 |
|
| 2021 |
Witvliet D, Mulcahy B, Mitchell JK, Meirovitch Y, Berger DR, Wu Y, Liu Y, Koh WX, Parvathala R, Holmyard D, Schalek RL, Shavit N, Chisholm AD, Lichtman JW, Samuel ADT, et al. Connectomes across development reveal principles of brain maturation. Nature. PMID 34349261 DOI: 10.1038/s41586-021-03778-8 |
0.766 |
|
| 2021 |
Ofer N, Berger DR, Kasthuri N, Lichtman JW, Yuste R. Ultrastructural analysis of dendritic spine necks reveals a continuum of spine morphologies. Developmental Neurobiology. PMID 33977655 DOI: 10.1002/dneu.22829 |
0.52 |
|
| 2020 |
Lin Z, Wei D, Jang WD, Zhou S, Chen X, Wang X, Schalek R, Berger D, Matejek B, Kamentsky L, Peleg A, Haehn D, Jones T, Parag T, Lichtman J, et al. Two Stream Active Query Suggestion for Active Learning in Connectomics. Computer Vision - Eccv ... : ... European Conference On Computer Vision : Proceedings. European Conference On Computer Vision. 12363: 103-120. PMID 33345257 DOI: 10.1007/978-3-030-58523-5_7 |
0.76 |
|
| 2019 |
Zonouzi M, Berger D, Jokhi V, Kedaigle A, Lichtman J, Arlotta P. Individual Oligodendrocytes Show Bias for Inhibitory Axons in the Neocortex. Cell Reports. 27: 2799-2808.e3. PMID 31167127 DOI: 10.1016/j.celrep.2019.05.018 |
0.733 |
|
| 2018 |
Fang T, Lu X, Berger D, Gmeiner C, Cho J, Schalek R, Ploegh H, Lichtman J. Nanobody immunostaining for correlated light and electron microscopy with preservation of ultrastructure. Nature Methods. PMID 30397326 DOI: 10.1038/S41592-018-0177-X |
0.557 |
|
| 2018 |
Berger DR, Seung HS, Lichtman JW. VAST (Volume Annotation and Segmentation Tool): Efficient Manual and Semi-Automatic Labeling of Large 3D Image Stacks. Frontiers in Neural Circuits. 12: 88. PMID 30386216 DOI: 10.3389/fncir.2018.00088 |
0.66 |
|
| 2018 |
Fang T, Lu X, Berger D, Ploegh H, Lichtman J. NATIVE: Nanobody-assisted tissue immunostaining for volumetric EM Protocol Exchange. DOI: 10.1038/Protex.2018.108 |
0.491 |
|
| 2017 |
Quadrato G, Nguyen T, Macosko EZ, Sherwood JL, Min Yang S, Berger DR, Maria N, Scholvin J, Goldman M, Kinney JP, Boyden ES, Lichtman JW, Williams ZM, McCarroll SA, Arlotta P. Cell diversity and network dynamics in photosensitive human brain organoids. Nature. PMID 28445462 DOI: 10.1038/Nature22047 |
0.707 |
|
| 2016 |
Morgan JL, Berger DR, Wetzel AW, Lichtman JW. The Fuzzy Logic of Network Connectivity in Mouse Visual Thalamus. Cell. 165: 192-206. PMID 27015312 DOI: 10.1016/j.cell.2016.02.033 |
0.704 |
|
| 2015 |
Arganda-Carreras I, Turaga SC, Berger DR, Cireşan D, Giusti A, Gambardella LM, Schmidhuber J, Laptev D, Dwivedi S, Buhmann JM, Liu T, Seyedhosseini M, Tasdizen T, Kamentsky L, Burget R, et al. Crowdsourcing the creation of image segmentation algorithms for connectomics. Frontiers in Neuroanatomy. 9: 142. PMID 26594156 DOI: 10.3389/Fnana.2015.00142 |
0.74 |
|
| 2015 |
Kasthuri N, Hayworth KJ, Berger DR, Schalek RL, Conchello JA, Knowles-Barley S, Lee D, Vázquez-Reina A, Kaynig V, Jones TR, Roberts M, Morgan JL, Tapia JC, Seung HS, Roncal WG, et al. Saturated Reconstruction of a Volume of Neocortex. Cell. 162: 648-61. PMID 26232230 DOI: 10.1016/J.Cell.2015.06.054 |
0.787 |
|
| 2015 |
Kasthuri N, Hayworth KJ, Berger DR, Schalek RL, Conchello JA, Knowles-Barley S, Lee D, Vázquez-Reina A, Kaynig V, Jones TR, Roberts M, Morgan JL, Tapia JC, Seung HS, Roncal WG, et al. Saturated Reconstruction of a Volume of Neocortex Cell. 162: 648-661. DOI: 10.1016/j.cell.2015.06.054 |
0.782 |
|
| 2014 |
Hayworth KJ, Morgan JL, Schalek R, Berger DR, Hildebrand DG, Lichtman JW. Imaging ATUM ultrathin section libraries with WaferMapper: a multi-scale approach to EM reconstruction of neural circuits. Frontiers in Neural Circuits. 8: 68. PMID 25018701 DOI: 10.3389/Fncir.2014.00068 |
0.756 |
|
| 2014 |
Tomassy GS, Berger DR, Chen HH, Kasthuri N, Hayworth KJ, Vercelli A, Seung HS, Lichtman JW, Arlotta P. Distinct profiles of myelin distribution along single axons of pyramidal neurons in the neocortex. Science (New York, N.Y.). 344: 319-24. PMID 24744380 DOI: 10.1126/Science.1249766 |
0.756 |
|
| 2013 |
Burns R, Roncal WG, Kleissas D, Lillaney K, Manavalan P, Perlman E, Berger DR, Bock DD, Chung K, Grosenick L, Kasthuri N, Weiler NC, Deisseroth K, Kazhdan M, Lichtman J, et al. The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience. Scientific and Statistical Database Management : International Conference, Ssdbm ... : Proceedings. International Conference On Scientific and Statistical Database Management. PMID 24401992 DOI: 10.1145/2484838.2484870 |
0.48 |
|
| 2012 |
Tapia JC, Wylie JD, Kasthuri N, Hayworth KJ, Schalek R, Berger DR, Guatimosim C, Seung HS, Lichtman JW. Pervasive synaptic branch removal in the mammalian neuromuscular system at birth. Neuron. 74: 816-29. PMID 22681687 DOI: 10.1016/J.Neuron.2012.04.017 |
0.767 |
|
| 2012 |
Schalek R, Wilson A, Lichtman J, Josh M, Kasthuri N, Berger D, Seung S, Anger P, Hayworth K, Aderhold D. ATUM-based SEM for High-Speed Large-Volume Biological Reconstructions Microscopy and Microanalysis. 18: 572-573. DOI: 10.1017/S1431927612004710 |
0.538 |
|
| 2011 |
Schalek R, Kasthuri N, Hayworth K, Berger D, Tapia J, Morgan J, Turaga S, Fagerholm E, Seung H, Lichtman J. Development of High-Throughput, High-Resolution 3D Reconstruction of Large-Volume Biological Tissue Using Automated Tape Collection Ultramicrotomy and Scanning Electron Microscopy Microscopy and Microanalysis. 17: 966-967. DOI: 10.1017/S1431927611005708 |
0.748 |
|
| 2010 |
Jain V, Bollmann B, Richardson M, Berger DR, Helmstaedter MN, Briggman KL, Denk W, Bowden JB, Mendenhall JM, Abraham WC, Harris KM, Kasthuri N, Hayworth KJ, Schalek R, Tapia JC, et al. Boundary learning by optimization with topological constraints Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 2488-2495. DOI: 10.1109/CVPR.2010.5539950 |
0.673 |
|
| 2007 |
Berger DR, Terzibas C, Beykirch K, Bülthoff HH. The role of visual cues and whole-body rotations in helicopter hovering control Collection of Technical Papers - 2007 Aiaa Modeling and Simulation Technologies Conference. 2: 962-974. |
0.621 |
|
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