Boris I. Shraiman - Publications

Affiliations: 
2004- Physics University of California, Santa Barbara, Santa Barbara, CA, United States 
Area:
statistical physics
Website:
http://www.kitp.ucsb.edu/shraiman/

46 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Neher RA, Bedford T, Daniels RS, Russell CA, Shraiman BI. Prediction, dynamics, and visualization of antigenic phenotypes of seasonal influenza viruses. Proceedings of the National Academy of Sciences of the United States of America. PMID 26951657 DOI: 10.1073/pnas.1525578113  0.32
2013 Mani M, Goyal S, Irvine KD, Shraiman BI. Collective polarization model for gradient sensing via Dachsous-Fat intercellular signaling. Proceedings of the National Academy of Sciences of the United States of America. 110: 20420-5. PMID 24282293 DOI: 10.1073/pnas.1307459110  1
2013 Neher RA, Kessinger TA, Shraiman BI. Coalescence and genetic diversity in sexual populations under selection. Proceedings of the National Academy of Sciences of the United States of America. 110: 15836-41. PMID 24019480 DOI: 10.1073/pnas.1309697110  1
2013 Neher RA, Vucelja M, Mezard M, Shraiman BI. Emergence of clones in sexual populations Journal of Statistical Mechanics: Theory and Experiment. 2013. DOI: 10.1088/1742-5468/2013/01/P01008  1
2013 Fisher D, Lässig M, Shraiman B. Evolutionary dynamics and statistical physics Journal of Statistical Mechanics: Theory and Experiment. 2013. DOI: 10.1088/1742-5468/2013/01/N01001  1
2012 Goyal S, Balick DJ, Jerison ER, Neher RA, Shraiman BI, Desai MM. Dynamic mutation-selection balance as an evolutionary attractor. Genetics. 191: 1309-19. PMID 22661327 DOI: 10.1534/genetics.112.141291  1
2012 Neher RA, Shraiman BI. Fluctuations of fitness distributions and the rate of Muller's ratchet. Genetics. 191: 1283-93. PMID 22649084 DOI: 10.1534/genetics.112.141325  1
2012 Chiou KK, Hufnagel L, Shraiman BI. Mechanical stress inference for two dimensional cell arrays. Plos Computational Biology. 8: e1002512. PMID 22615550 DOI: 10.1371/journal.pcbi.1002512  1
2012 Puliafito A, Hufnagel L, Neveu P, Streichan S, Sigal A, Fygenson DK, Shraiman BI. Collective and single cell behavior in epithelial contact inhibition. Proceedings of the National Academy of Sciences of the United States of America. 109: 739-44. PMID 22228306 DOI: 10.1073/pnas.1007809109  1
2011 Lubensky DK, Pennington MW, Shraiman BI, Baker NE. A dynamical model of ommatidial crystal formation. Proceedings of the National Academy of Sciences of the United States of America. 108: 11145-50. PMID 21690337 DOI: 10.1073/pnas.1015302108  1
2011 Neher RA, Shraiman BI. Genetic draft and quasi-neutrality in large facultatively sexual populations. Genetics. 188: 975-96. PMID 21625002 DOI: 10.1534/genetics.111.128876  1
2011 Pumir A, Shraiman B. Epistasis in a Model of Molecular Signal Transduction Plos Computational Biology. 7. PMID 21589889 DOI: 10.1371/journal.pcbi.1001134  1
2011 Callahan B, Neher RA, Bachtrog D, Andolfatto P, Shraiman BI. Correlated evolution of nearby residues in Drosophilid proteins. Plos Genetics. 7: e1001315. PMID 21383965 DOI: 10.1371/journal.pgen.1001315  1
2011 Neher RA, Shraiman BI. Statistical genetics and evolution of quantitative traits Reviews of Modern Physics. 83. DOI: 10.1103/RevModPhys.83.1283  1
2010 Neveu P, Kye MJ, Qi S, Buchholz DE, Clegg DO, Sahin M, Park IH, Kim KS, Daley GQ, Kornblum HI, Shraiman BI, Kosik KS. MicroRNA profiling reveals two distinct p53-related human pluripotent stem cell states. Cell Stem Cell. 7: 671-81. PMID 21112562 DOI: 10.1016/j.stem.2010.11.012  1
2010 Neher RA, Shraiman BI, Fisher DS. Rate of adaptation in large sexual populations. Genetics. 184: 467-81. PMID 19948891 DOI: 10.1534/genetics.109.109009  1
2009 Burak Y, Shraiman BI. Order and stochastic dynamics in Drosophila planar cell polarity. Plos Computational Biology. 5: e1000628. PMID 20041171 DOI: 10.1371/journal.pcbi.1000628  1
2009 Callahan B, Thattai M, Shraiman BI. Emergent gene order in a model of modular polyketide synthases. Proceedings of the National Academy of Sciences of the United States of America. 106: 19410-5. PMID 19864629 DOI: 10.1073/pnas.0902364106  1
2008 Pumir A, Graves J, Ranganathan R, Shraiman BI. Systems analysis of the single photon response in invertebrate photoreceptors. Proceedings of the National Academy of Sciences of the United States of America. 105: 10354-9. PMID 18653755 DOI: 10.1073/pnas.0711884105  0.32
2007 Thattai M, Burak Y, Shraiman BI. The origins of specificity in polyketide synthase protein interactions. Plos Computational Biology. 3: 1827-35. PMID 17907798 DOI: 10.1371/journal.pcbi.0030186  0.32
2007 Hufnagel L, Teleman AA, Rouault H, Cohen SM, Shraiman BI. On the mechanism of wing size determination in fly development. Proceedings of the National Academy of Sciences of the United States of America. 104: 3835-40. PMID 17360439 DOI: 10.1073/pnas.0607134104  0.32
2006 Hufnagel L, Kreuger J, Cohen SM, Shraiman BI. On the role of glypicans in the process of morphogen gradient formation. Developmental Biology. 300: 512-22. PMID 17074313 DOI: 10.1016/j.ydbio.2006.08.076  0.32
2005 Ramanathan S, Detwiler PB, Sengupta AM, Shraiman BI. G-protein-coupled enzyme cascades have intrinsic properties that improve signal localization and fidelity. Biophysical Journal. 88: 3063-71. PMID 15681646 DOI: 10.1529/biophysj.103.039321  0.32
2004 Ozbudak EM, Thattai M, Lim HN, Shraiman BI, Van Oudenaarden A. Multistability in the lactose utilization network of Escherichia coli. Nature. 427: 737-40. PMID 14973486 DOI: 10.1038/nature02298  0.32
2002 Ronen M, Rosenberg R, Shraiman BI, Alon U. Assigning numbers to the arrows: parameterizing a gene regulation network by using accurate expression kinetics. Proceedings of the National Academy of Sciences of the United States of America. 99: 10555-60. PMID 12145321 DOI: 10.1073/pnas.152046799  0.32
2000 Pumir A, Shraiman BI, Chertkov M. Geometry of Lagrangian dispersion in turbulence. Physical Review Letters. 85: 5324-7. PMID 11135987 DOI: 10.1103/PhysRevLett.85.5324  0.52
2000 Detwiler PB, Ramanathan S, Sengupta A, Shraiman BI. Engineering aspects of enzymatic signal transduction: photoreceptors in the retina. Biophysical Journal. 79: 2801-17. PMID 11106590 DOI: 10.1016/S0006-3495(00)76519-2  0.32
2000 Shraiman BI, Siggia ED. Scalar turbulence Nature. 405: 639-46. PMID 10864314 DOI: 10.1038/35015000  1
2000 Thomas GA, Shraiman BI, Glodis PF, Stephens MJ. Towards the clarity limit in optical fibre Nature. 404: 262-4. PMID 10749203 DOI: 10.1038/35005034  0.32
1996 Shraiman BI, Siggia ED. Symmetry and Scaling of Turbulent Mixing. Physical Review Letters. 77: 2463-2466. PMID 10061960 DOI: 10.1103/PhysRevLett.77.2463  1
1995 Pumir A, Shraiman BI. Persistent small scale anisotropy in homogeneous shear flows. Physical Review Letters. 75: 3114-3117. PMID 10059498 DOI: 10.1103/PhysRevLett.75.3114  0.52
1994 Shraiman BI, Siggia ED. Lagrangian path integrals and fluctuations in random flow. Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 49: 2912-2927. PMID 9961557  1
1994 Golomb D, Kleinfeld D, Reid RC, Shapley RM, Shraiman BI. On temporal codes and the spatiotemporal response of neurons in the lateral geniculate nucleus. Journal of Neurophysiology. 72: 2990-3003. PMID 7897504  0.32
1992 Shraiman BI, Siggia ED. Excitation spectrum of the spiral state of a doped antiferromagnet. Physical Review. B, Condensed Matter. 46: 8305-8311. PMID 10002592  1
1992 Pumir A, Shraiman BI, Siggia ED. Vortex morphology and Kelvin's theorem. Physical Review. A. 45: R5351-R5354. PMID 9907727  1
1991 Pumir A, Shraiman BI, Siggia ED. Exponential tails and random advection. Physical Review Letters. 66: 2984-2987. PMID 10043669 DOI: 10.1103/PhysRevLett.66.2984  1
1990 Shastry BS, Shraiman BI. Theory of Raman scattering in Mott-Hubbard systems. Physical Review Letters. 65: 1068-1071. PMID 10043097 DOI: 10.1103/PhysRevLett.65.1068  0.32
1990 Shraiman BI, Siggia ED. Mobile vacancy in a quantum antiferromagnet: Effective Hamiltonian. Physical Review. B, Condensed Matter. 42: 2485-2500. PMID 9995698  1
1990 Elser V, Huse DA, Shraiman BI, Siggia ED. Ground state of a mobile vacancy in a quantum antiferromagnet: Small-cluster study. Physical Review. B, Condensed Matter. 41: 6715-6723. PMID 9992924  1
1990 Frenkel DM, Gooding RJ, Shraiman BI, Siggia ED. Ground-state properties of a single oxygen hole in a CuO2 plane. Physical Review. B, Condensed Matter. 41: 350-370. PMID 9992772  1
1990 Shraiman BI, Siggia ED. Heat transport in high-Rayleigh-number convection. Physical Review. A. 42: 3650-3653. PMID 9904456  1
1989 Shraiman BI, Siggia ED. Spiral phase of a doped quantum antiferromagnet. Physical Review Letters. 62: 1564-1567. PMID 10039706 DOI: 10.1103/PhysRevLett.62.1564  1
1989 Shraiman BI, Siggia ED. Mean-field theory for vacancies in a quantum antiferromagnet. Physical Review. B, Condensed Matter. 40: 9162-9166. PMID 9991405  1
1988 Shraiman BI, Siggia ED. Mobile vacancies in a quantum Heisenberg antiferromagnet. Physical Review Letters. 61: 467-470. PMID 10039340 DOI: 10.1103/PhysRevLett.61.467  1
1988 Shraiman BI, Siggia ED. Two-particle excitations in antiferromagnetic insulators. Physical Review Letters. 60: 740-743. PMID 10038634 DOI: 10.1103/PhysRevLett.60.740  1
1986 Halsey TC, Jensen MH, Kadanoff LP, Procaccia I, Shraiman BI. Fractal measures and their singularities: The characterization of strange sets. Physical Review. A. 33: 1141-1151. PMID 9896729 DOI: 10.1016/0920-5632(87)90036-3  0.32
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