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Yangming Ou, Ph.D. - Publications

Affiliations: 
2012 Bioengineering University of Pennsylvania, Philadelphia, PA, United States 
Area:
Information and Decision Systems
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43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wang H, Han G, Li H, Tao G, Zhuo E, Liu L, Cai H, Ou Y. A Collaborative Dictionary Learning Model for Nasopharyngeal Carcinoma Segmentation on Multimodalities MR Sequences. Computational and Mathematical Methods in Medicine. 2020: 7562140. PMID 32908581 DOI: 10.1155/2020/7562140  0.387
2020 Yang J, Dong X, Hu Y, Peng Q, Tao G, Ou Y, Cai H, Yang X. Fully Automatic Arteriovenous Segmentation in Retinal Images via Topology-Aware Generative Adversarial Networks. Interdisciplinary Sciences, Computational Life Sciences. PMID 32725575 DOI: 10.1007/S12539-020-00385-5  0.35
2020 Zöllei L, Iglesias JE, Ou Y, Grant PE, Fischl B. Infant FreeSurfer: An automated segmentation and surface extraction pipeline for T1-weighted neuroimaging data of infants 0-2 years. Neuroimage. 116946. PMID 32442637 DOI: 10.1016/J.Neuroimage.2020.116946  0.366
2020 Qi L, Zhang H, Cao X, Lyu X, Xu L, Yang B, Ou Y. Multi-Scale Feature Fusion Convolutional Neural Network for Concurrent Segmentation of Left Ventricle and Myocardium in Cardiac MR Images Journal of Medical Imaging and Health Informatics. 10: 1023-1032. DOI: 10.1166/Jmihi.2020.3005  0.334
2019 Weiss RJ, Bates SV, Song Y, Zhang Y, Herzberg EM, Chen YC, Gong M, Chien I, Zhang L, Murphy SN, Gollub RL, Grant PE, Ou Y. Mining multi-site clinical data to develop machine learning MRI biomarkers: application to neonatal hypoxic ischemic encephalopathy. Journal of Translational Medicine. 17: 385. PMID 31752923 DOI: 10.1186/S12967-019-2119-5  0.317
2019 Machado I, Toews M, George E, Unadkat P, Essayed W, Luo J, Teodoro P, Carvalho H, Martins J, Golland P, Pieper S, Frisken S, Golby A, Wells W, Ou Y. Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data. Neuroimage. 116094. PMID 31446127 DOI: 10.1016/J.Neuroimage.2019.116094  0.42
2019 Xiao Y, Rivaz H, Chabanas M, Fortin M, Machado I, Ou Y, Heinrich MP, Schnabel JA, Zhong X, Maier A, Wein W, Shams R, Kadoury S, Drobny D, Modat M, et al. Evaluation of MRI to ultrasound registration methods for brain shift correction: The CuRIOUS2018 Challenge. Ieee Transactions On Medical Imaging. PMID 31425023 DOI: 10.1109/Tmi.2019.2935060  0.386
2018 Ina Ly K, Vakulenko-Lagun B, Emblem KE, Ou Y, Da X, Betensky RA, Kalpathy-Cramer J, Duda DG, Jain RK, Chi AS, Plotkin SR, Batchelor TT, Sorensen G, Rosen BR, Gerstner ER. Probing tumor microenvironment in patients with newly diagnosed glioblastoma during chemoradiation and adjuvant temozolomide with functional MRI. Scientific Reports. 8: 17062. PMID 30459364 DOI: 10.1038/S41598-018-34820-X  0.333
2018 Ou Y, Zöllei L, Da X, Retzepi K, Murphy SN, Gerstner ER, Rosen BR, Grant PE, Kalpathy-Cramer J, Gollub RL. Field of View Normalization in Multi-Site Brain MRI. Neuroinformatics. PMID 29353341 DOI: 10.1007/S12021-018-9359-Z  0.409
2018 Davatzikos C, Rathore S, Bakas S, Pati S, Bergman M, Kalarot R, Sridharan P, Gastounioti A, Jahani N, Cohen E, Akbari H, Tunc B, Doshi J, Parker D, Hsieh M, ... ... Ou Y, et al. Cancer imaging phenomics toolkit: quantitative imaging analytics for precision diagnostics and predictive modeling of clinical outcome. Journal of Medical Imaging (Bellingham, Wash.). 5: 011018. PMID 29340286 DOI: 10.1117/1.Jmi.5.1.011018  0.535
2017 Zhou M, Scott J, Chaudhury B, Hall L, Goldgof D, Yeom KW, Iv M, Ou Y, Kalpathy-Cramer J, Napel S, Gillies R, Gevaert O, Gatenby R. Radiomics in Brain Tumor: Image Assessment, Quantitative Feature Descriptors, and Machine-Learning Approaches. Ajnr. American Journal of Neuroradiology. PMID 28982791 DOI: 10.3174/Ajnr.A5391  0.395
2017 Tu X, Xie M, Gao J, Ma Z, Chen D, Wang Q, Finlayson SG, Ou Y, Cheng JZ. Automatic Categorization and Scoring of Solid, Part-Solid and Non-Solid Pulmonary Nodules in CT Images with Convolutional Neural Network. Scientific Reports. 7: 8533. PMID 28864824 DOI: 10.1038/S41598-017-08040-8  0.381
2017 Ou Y, Zöllei L, Retzepi K, Castro V, Bates SV, Pieper S, Andriole KP, Murphy SN, Gollub RL, Grant PE. Using clinically acquired MRI to construct age-specific ADC atlases: Quantifying spatiotemporal ADC changes from birth to 6-year old. Human Brain Mapping. PMID 28371107 DOI: 10.1002/Hbm.23573  0.34
2016 Dinh CV, Steenbergen P, Ghobadi G, van der Poel H, Heijmink SW, de Jong J, Isebaert S, Haustermans K, Lerut E, Oyen R, Ou Y, Christos D, van der Heide UA. Multi-center validation of prostate tumor localization using multi-parametric MRI and prior knowledge. Medical Physics. PMID 28039927 DOI: 10.1002/Mp.12086  0.328
2016 Kalpathy-Cramer J, Chandra V, Da X, Ou Y, Emblem KE, Muzikansky A, Cai X, Douw L, Evans JG, Dietrich J, Chi AS, Wen PY, Stufflebeam S, Rosen B, Duda DG, et al. Phase II study of tivozanib, an oral VEGFR inhibitor, in patients with recurrent glioblastoma. Journal of Neuro-Oncology. PMID 27853960 DOI: 10.1007/S11060-016-2332-5  0.318
2015 Doshi J, Erus G, Ou Y, Resnick SM, Gur RC, Gur RE, Satterthwaite TD, Furth S, Davatzikos C. MUSE: MUlti-atlas region Segmentation utilizing Ensembles of registration algorithms and parameters, and locally optimal atlas selection. Neuroimage. PMID 26679328 DOI: 10.1016/J.Neuroimage.2015.11.073  0.54
2015 Ou Y, Gollub RL, Retzepi K, Reynolds N, Pienaar R, Pieper S, Murphy SN, Grant PE, Zöllei L. Brain extraction in pediatric ADC maps, toward characterizing neuro-development in multi-platform and multi-institution clinical images. Neuroimage. 122: 246-61. PMID 26260429 DOI: 10.1016/J.Neuroimage.2015.08.002  0.384
2015 Rojas KD, Montero ML, Yao J, Messing E, Fazili A, Joseph J, Ou Y, Rubens DJ, Parker KJ, Davatzikos C, Castaneda B. Methodology to study the three-dimensional spatial distribution of prostate cancer and their dependence on clinical parameters. Journal of Medical Imaging (Bellingham, Wash.). 2: 037502. PMID 26236756 DOI: 10.1117/1.Jmi.2.3.037502  0.458
2015 Petitjean C, Zuluaga MA, Bai W, Dacher JN, Grosgeorge D, Caudron J, Ruan S, Ayed IB, Cardoso MJ, Chen HC, Jimenez-Carretero D, Ledesma-Carbayo MJ, Davatzikos C, Doshi J, Erus G, ... ... Ou Y, et al. Right ventricle segmentation from cardiac MRI: a collation study. Medical Image Analysis. 19: 187-202. PMID 25461337 DOI: 10.1016/J.Media.2014.10.004  0.526
2015 Ou Y, Weinstein SP, Conant EF, Englander S, Da X, Gaonkar B, Hsieh MK, Rosen M, DeMichele A, Davatzikos C, Kontos D. Deformable registration for quantifying longitudinal tumor changes during neoadjuvant chemotherapy. Magnetic Resonance in Medicine. 73: 2343-56. PMID 25046843 DOI: 10.1002/Mrm.25368  0.478
2015 Wu J, Ou Y, Weinstein SP, Conant EF, Yu N, Hoshmand V, Keller B, Ashraf AB, Rosen M, Demichele A, Davatzikos C, Kontos D. Quantification of tumor changes during neoadjuvant chemotherapy with longitudinal breast DCE-MRI registration Progress in Biomedical Optics and Imaging - Proceedings of Spie. 9414. DOI: 10.1117/12.2081938  0.531
2015 Gerstner E, Izquierdo D, Ou Y, Emblem K, Cai X, Da X, Chonde D, Martin N, Hooker J, Catana C, Kalpathy-Cramer J, Rosen B, Batchelor T. NIMG-29RADIOLABELED TEMOZOLOMIDE CAN MEASURE BEVACIZUMAB INDUCED VASCULAR MODULATION IN PATIENTS WITH RECURRENT GBM Neuro-Oncology. 17: v160.1-v160. DOI: 10.1093/Neuonc/Nov225.29  0.357
2015 Sotiras A, Ou Y, Paragios N, Davatzikos C. Graph-based deformable image registration Handbook of Biomedical Imaging: Methodologies and Clinical Research. 331-359. DOI: 10.1007/978-0-387-09749-7_18  0.402
2014 Ou Y, Akbari H, Bilello M, Da X, Davatzikos C. Comparative evaluation of registration algorithms in different brain databases with varying difficulty: results and insights. Ieee Transactions On Medical Imaging. 33: 2039-65. PMID 24951685 DOI: 10.1109/Tmi.2014.2330355  0.538
2014 Serpa MH, Ou Y, Schaufelberger MS, Doshi J, Ferreira LK, Machado-Vieira R, Menezes PR, Scazufca M, Davatzikos C, Busatto GF, Zanetti MV. Neuroanatomical classification in a population-based sample of psychotic major depression and bipolar I disorder with 1 year of diagnostic stability. Biomed Research International. 2014: 706157. PMID 24575411 DOI: 10.1155/2014/706157  0.446
2014 Litjens G, Toth R, van de Ven W, Hoeks C, Kerkstra S, van Ginneken B, Vincent G, Guillard G, Birbeck N, Zhang J, Strand R, Malmberg F, Ou Y, Davatzikos C, Kirschner M, et al. Evaluation of prostate segmentation algorithms for MRI: the PROMISE12 challenge. Medical Image Analysis. 18: 359-73. PMID 24418598 DOI: 10.1016/J.Media.2013.12.002  0.517
2014 Da X, Toledo JB, Zee J, Wolk DA, Xie SX, Ou Y, Shacklett A, Parmpi P, Shaw L, Trojanowski JQ, Davatzikos C. Integration and relative value of biomarkers for prediction of MCI to AD progression: spatial patterns of brain atrophy, cognitive scores, APOE genotype and CSF biomarkers. Neuroimage. Clinical. 4: 164-73. PMID 24371799 DOI: 10.1016/J.Nicl.2013.11.010  0.418
2014 Chandra V, Ou Y, Evans J, Kalpathy-Cramer J, Dietrich J, Chi A, Wen P, Rosen B, Batchelor T, Gerstner E. At-16Phase Ii Study Of Tivozanib, An Oral Vegfr Inhibitor, In Patients With Recurrent Glioblastoma Neuro-Oncology. 16. DOI: 10.1093/Neuonc/Nou237.16  0.318
2013 Doshi J, Erus G, Ou Y, Gaonkar B, Davatzikos C. Multi-atlas skull-stripping. Academic Radiology. 20: 1566-76. PMID 24200484 DOI: 10.1016/J.Acra.2013.09.010  0.567
2013 Zanetti MV, Schaufelberger MS, Doshi J, Ou Y, Ferreira LK, Menezes PR, Scazufca M, Davatzikos C, Busatto GF. Neuroanatomical pattern classification in a population-based sample of first-episode schizophrenia. Progress in Neuro-Psychopharmacology & Biological Psychiatry. 43: 116-25. PMID 23261522 DOI: 10.1016/J.Pnpbp.2012.12.005  0.441
2012 Ou Y, Ye DH, Pohl KM, Davatzikos C. Validation of DRAMMS among 12 Popular Methods in Cross-Subject Cardiac MRI Registration. Biomedical Image Registration, ... Proceedings. Wbir (Workshop : 2006- ). 7359: 209-219. PMID 28603787 DOI: 10.1007/978-3-642-31340-0_22  0.47
2012 Ou Y, Ye DH, Pohl KM, Davatzikos C. Validation of DRAMMS among 12 popular methods in cross-subject cardiac MRI registration Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 7359: 209-219. DOI: 10.1007/978-3-642-31340-0_22  0.47
2011 Ou Y, Sotiras A, Paragios N, Davatzikos C. DRAMMS: Deformable registration via attribute matching and mutual-saliency weighting. Medical Image Analysis. 15: 622-39. PMID 20688559 DOI: 10.1016/J.Media.2010.07.002  0.567
2011 Baumann B, Teo B, Pohl K, Ou Y, Doshi J, Alonso-Basanta M, Christodouleas J, Davatzikos C, Kao G, Dorsey J. Multiparametric Processing of Serial MRI during Radiation Therapy of Brain Tumors: ‘Finishing with FLAIR?’ International Journal of Radiation Oncology*Biology*Physics. 81: S794. DOI: 10.1016/J.Ijrobp.2011.06.1389  0.442
2010 Sotiras A, Ou Y, Glocker B, Davatzikos C, Paragios N. Simultaneous geometric--iconic registration. Medical Image Computing and Computer-Assisted Intervention : Miccai ... International Conference On Medical Image Computing and Computer-Assisted Intervention. 13: 676-83. PMID 20879374  0.417
2010 Ou Y, Besbes A, Bilellod M, Mansourd M, Davatzikos C, Paragios N. Detecting mutually-salient landmark pairs with MRF regularization 2010 7th Ieee International Symposium On Biomedical Imaging: From Nano to Macro, Isbi 2010 - Proceedings. 400-403. DOI: 10.1109/ISBI.2010.5490324  0.44
2010 Sotiras A, Ou Y, Glocker B, Davatzikos C, Paragios N. Simultaneous geometric - Iconic registration Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 6362: 676-683. DOI: 10.1007/978-3-642-15745-5_83  0.416
2009 Ou Y, Davatzikos C. DRAMMS: deformable registration via attribute matching and mutual-saliency weighting. Information Processing in Medical Imaging : Proceedings of the ... Conference. 21: 50-62. PMID 19694252  0.519
2009 Ou Y, Shen D, Zeng J, Sun L, Moul J, Davatzikos C. Sampling the spatial patterns of cancer: optimized biopsy procedures for estimating prostate cancer volume and Gleason Score. Medical Image Analysis. 13: 609-20. PMID 19524478 DOI: 10.1016/J.Media.2009.05.002  0.467
2009 Ou Y, Shen D, Feldman M, Tomaszewski J, Davatzikos C. Non-rigid registration between histological and MR images of the prostate: A joint segmentation and registration framework 2009 Ieee Conference On Computer Vision and Pattern Recognition, Cvpr 2009. 125-132. DOI: 10.1109/CVPR.2009.5204347  0.458
2008 Verma R, Zacharaki EI, Ou Y, Cai H, Chawla S, Lee SK, Melhem ER, Wolf R, Davatzikos C. Multiparametric tissue characterization of brain neoplasms and their recurrence using pattern classification of MR images. Academic Radiology. 15: 966-77. PMID 18620117 DOI: 10.1016/J.Acra.2008.01.029  0.548
2007 Zhan Y, Ou Y, Feldman M, Tomaszeweski J, Davatzikos C, Shen D. Registering histologic and MR images of prostate for image-based cancer detection. Academic Radiology. 14: 1367-81. PMID 17964460 DOI: 10.1016/J.Acra.2007.07.018  0.542
2007 Cai H, Verma R, Ou Y, Lee SK, Melhem ER, Davatzikos C. Probabilistic segmentation of brain tumors based on multi-modality magnetic resonance images 2007 4th Ieee International Symposium On Biomedical Imaging: From Nano to Macro - Proceedings. 600-603. DOI: 10.1109/ISBI.2007.356923  0.461
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