| Year |
Citation |
Score |
| 2016 |
Del Bonis-O'Donnell JT, Vong D, Pennathur S, Fygenson DK. A universal design for a DNA probe providing ratiometric fluorescence detection by generation of silver nanoclusters. Nanoscale. PMID 27406901 DOI: 10.1039/C6Nr03827A |
0.324 |
|
| 2016 |
Del Bonis-O'Donnell JT, Pennathur S, Fygenson DK. Changes in Spectra and Conformation of Hairpin DNA-Stabilized Silver Nanoclusters Induced by Stem Sequence Perturbations. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 26685711 DOI: 10.1021/Acs.Langmuir.5B03934 |
0.332 |
|
| 2016 |
Velazquez L, Clayton-Warwick D, Fygenson D. Use of Nunchuk Nanostructures for Dynamic dsDNA Bend Angle Measurements by Fluorescence Microscopy Biophysical Journal. 110: 405a. DOI: 10.1016/J.Bpj.2015.11.2187 |
0.426 |
|
| 2015 |
Del Bonis-O'Donnell JT, Fygenson DK, Pennathur S. Fluorescent silver nanocluster DNA probes for multiplexed detection using microfluidic capillary electrophoresis. The Analyst. 140: 1609-15. PMID 25601044 DOI: 10.1039/C4An01735H |
0.348 |
|
| 2013 |
Hendricks GL, Weirich KL, Viswanathan K, Li J, Shriver ZH, Ashour J, Ploegh HL, Kurt-Jones EA, Fygenson DK, Finberg RW, Comolli JC, Wang JP. Sialylneolacto-N-tetraose c (LSTc)-bearing liposomal decoys capture influenza A virus. The Journal of Biological Chemistry. 288: 8061-73. PMID 23362274 DOI: 10.1074/Jbc.M112.437202 |
0.674 |
|
| 2013 |
Del Bonis-O'Donnell JT, Fygenson D, Pennathur S. Tuning the mobility of fluorescent, dna-templated, silver nanoclusters for electrophoretic separations in microchannels 17th International Conference On Miniaturized Systems For Chemistry and Life Sciences, Microtas 2013. 3: 1863-1865. |
0.356 |
|
| 2012 |
O'Neill PR, Young K, Schiffels D, Fygenson DK. Few-atom fluorescent silver clusters assemble at programmed sites on DNA nanotubes. Nano Letters. 12: 5464-9. PMID 23025790 DOI: 10.1021/nl3017797 |
0.674 |
|
| 2011 |
Driehorst T, O'Neill P, Goodwin PM, Pennathur S, Fygenson DK. Distinct conformations of DNA-stabilized fluorescent silver nanoclusters revealed by electrophoretic mobility and diffusivity measurements. Langmuir : the Acs Journal of Surfaces and Colloids. 27: 8923-33. PMID 21682258 DOI: 10.1021/La200837Z |
0.682 |
|
| 2011 |
Fygenson DK, Schneider C, Banks H. Combining DNA Nanotechnology and Fluorescence Polarization Microscopy to Determine the Orientation of DNA Bound Fluorophores Biophysical Journal. 100: 618a. DOI: 10.1016/j.bpj.2010.12.3555 |
0.327 |
|
| 2011 |
Weirich KL, Fygenson DK. Thermal Stress of Supported Lipid Bilayer Induces Formation and Collapse of Uniform Radius Tubules Biophysical Journal. 100: 503a. DOI: 10.1016/J.Bpj.2010.12.2943 |
0.733 |
|
| 2010 |
Weirich KL, Israelachvili JN, Fygenson DK. Bilayer edges catalyze supported lipid bilayer formation. Biophysical Journal. 98: 85-92. PMID 20085721 DOI: 10.1016/J.Bpj.2009.09.050 |
0.735 |
|
| 2010 |
O'Neill PR, Young K, Velazquez L, Hassanzadeh R, Gwinn EG, Fygenson DK. DNA Stabilizes Fluorescent Few-Atom Silver Clusters with Unique Photophysical Properties Biophysical Journal. 98: 577a. DOI: 10.1016/J.Bpj.2009.12.3137 |
0.689 |
|
| 2010 |
Oemrawsingh SSR, O'Neill P, Leijssen R, Eliel ER, Gwinn EG, Fygenson DK, Bouwmeester D. Spectral studies of optical coherence in DNA-encapsulated silver clusters Lasers and Electro-Optics/Quantum Electronics and Laser Science Conference: 2010 Laser Science to Photonic Applications, Cleo/Qels 2010. |
0.639 |
|
| 2009 |
Anderson TH, Min Y, Weirich KL, Zeng H, Fygenson D, Israelachvili JN. Formation of supported bilayers on silica substrates. Langmuir : the Acs Journal of Surfaces and Colloids. 25: 6997-7005. PMID 19354208 DOI: 10.1021/La900181C |
0.727 |
|
| 2009 |
O'Neill PR, Velazquez LR, Dunn DG, Gwinn EG, Fygenson DK. Hairpins with poly-C loops stabilize four types of fluorescent Ag n: DNA Journal of Physical Chemistry C. 113: 4229-4233. DOI: 10.1021/Jp809274M |
0.688 |
|
| 2009 |
Weirich KL, Israelachvili JN, Fygenson DK. The Role of Bilayer Edges in Supported Lipid Bilayer Formation at Low Lipid Concentrations Biophysical Journal. 96: 349a. DOI: 10.1016/J.Bpj.2008.12.1754 |
0.729 |
|
| 2009 |
Driehorst T, O'Neill P, Fygenson DK, Pennathur S. Characterization of Agn: DNA nanoclusters by capillary electrophoresis in microfluidic channels Proceedings of Conference, Microtas 2009 - the 13th International Conference On Miniaturized Systems For Chemistry and Life Sciences. 1575-1577. |
0.672 |
|
| 2008 |
Gwinn EG, O'Neill P, Guerrero AJ, Bouwmeester D, Fygenson DK. Sequence-dependent fluorescence of DNA-hosted silver nanoclusters Advanced Materials. 20: 279-283. DOI: 10.1002/Adma.200702380 |
0.695 |
|
| 2006 |
O'Neill P, Rothemund PW, Kumar A, Fygenson DK. Sturdier DNA nanotubes via ligation. Nano Letters. 6: 1379-83. PMID 16834415 DOI: 10.1021/nl0603505 |
0.658 |
|
| 2004 |
Fygenson DK, Needleman DJ, Sneppen K. Variability-based sequence alignment identifies residues responsible for functional differences in alpha and beta tubulin. Protein Science : a Publication of the Protein Society. 13: 25-31. PMID 14691218 DOI: 10.1110/Ps.03225304 |
0.51 |
|
| 2002 |
Bjorndal MT, Fygenson DK. DNA melting in the presence of fluorescent intercalating oxazole yellow dyes measured with a gel-based assay Biopolymers. 65: 40-44. PMID 12209471 DOI: 10.1002/bip.10220 |
0.332 |
|
| 1998 |
Goulian M, Mesquita ON, Fygenson DK, Nielsen C, Andersen OS, Libchaber A. Gramicidin channel kinetics under tension. Biophysical Journal. 74: 328-37. PMID 9449333 DOI: 10.1016/S0006-3495(98)77790-2 |
0.504 |
|
| 1997 |
Fygenson DK, Marko JF, Libchaber A. Mechanics of microtubule-based membrane extension Physical Review Letters. 79: 4497-4500. DOI: 10.1103/Physrevlett.79.4497 |
0.516 |
|
| 1994 |
Fygenson DK, Braun E, Libchaber A. Phase diagram of microtubules. Physical Review. E, Statistical Physics, Plasmas, Fluids, and Related Interdisciplinary Topics. 50: 1579-1588. PMID 9962129 DOI: 10.1103/PhysRevE.50.1579 |
0.421 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2013 |
Schiffels D, Liedl T, Fygenson DK. Nanoscale structure and microscale stiffness of DNA nanotubes. Acs Nano. 7: 6700-10. PMID 23879368 DOI: 10.1021/Nn401362P |
0.283 |
|
| 2016 |
Mohammed AM, Velazquez L, Chisenhall A, Schiffels D, Fygenson DK, Schulman R. Self-assembly of precisely defined DNA nanotube superstructures using DNA origami seeds. Nanoscale. PMID 27957574 DOI: 10.1039/C6Nr06983E |
0.274 |
|
| 2017 |
Del Bonis-O'Donnell JT, Thakrar A, Wain Hirschberg J, Vong D, Queenan BN, Fygenson DK, Pennathur S. DNA-stabilized silver nanoclusters as specific, ratiometric fluorescent dopamine sensors. Acs Chemical Neuroscience. PMID 29254331 DOI: 10.1021/Acschemneuro.7B00444 |
0.27 |
|
| 2019 |
Cai X, Arias DS, Velazquez LR, Vexler S, Bevier A, Fygenson DK. DNA Nunchucks: Nanoinstrumentation for Single-Molecule Measurement of Stiffness and Bending. Nano Letters. PMID 31872766 DOI: 10.1021/acs.nanolett.9b04980 |
0.27 |
|
| 2011 |
ONeill PR, Gwinn EG, Fygenson DK. UV excitation of DNA stabilized Ag cluster fluorescence via the DNA bases Journal of Physical Chemistry C. 115: 24061-24066. DOI: 10.1021/Jp206110R |
0.268 |
|
| 2004 |
Rothemund PWK, Ekani-Nkodo A, Papadakis N, Kumar A, Fygenson DK, Winfree E. Design and characterization of programmable DNA nanotubes Journal of the American Chemical Society. 126: 16344-16352. PMID 15600335 DOI: 10.1021/Ja044319L |
0.263 |
|
| 2010 |
Schiffels D, Rädler J, Fygenson DK. Design and Construction of a DNA Nanostructure for Direct and Dynamic Measurement of DNA Bending by DNA-Binding Proteins Biophysical Journal. 98: 661a. DOI: 10.1016/j.bpj.2009.12.3629 |
0.259 |
|
| 2004 |
Ekani-Nkodo A, Kumar A, Fygenson DK. Joining and scission in the self-assembly of nanotubes from DNA tiles. Physical Review Letters. 93: 268301. PMID 15698032 DOI: 10.1103/PhysRevLett.93.268301 |
0.256 |
|
| 1998 |
Goodman MF, Fygenson DK. DNA polymerase fidelity: From genetics toward a biochemical understanding Genetics. 148: 1475-1482. PMID 9560367 |
0.241 |
|
| 2020 |
Song J, Levenson R, Santos J, Velazquez L, Zhang F, Fygenson DK, Wu W, Morse DE. Reflectin Proteins Bind and Reorganize Synthetic Phospholipid Vesicles. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 32097553 DOI: 10.1021/Acs.Langmuir.9B03632 |
0.232 |
|
| 2013 |
Saleh OA, Fygenson DK, Bertrand OJN, Park CY. Active DNA gels Aip Conference Proceedings. 1518: 517-519. DOI: 10.1063/1.4794627 |
0.23 |
|
| 2012 |
Wang T, Schiffels D, Cuesta SM, Fygenson DK, Seeman NC. Design and characterization of 1D nanotubes and 2D periodic arrays self-assembled from DNA multi-helix bundles. Journal of the American Chemical Society. 134: 1606-16. PMID 22239727 DOI: 10.1021/Ja207976Q |
0.213 |
|
| 1997 |
Fygenson DK, Goodman MF. Gel kinetic analysis of polymerase fidelity in the presence of multiple enzyme DNA encounters Journal of Biological Chemistry. 272: 27931-27935. PMID 9346942 DOI: 10.1074/jbc.272.44.27931 |
0.198 |
|
| 2018 |
Jeon BJ, Nguyen DT, Abraham GR, Conrad N, Fygenson DK, Saleh OA. Salt-dependent properties of a coacervate-like, self-assembled DNA liquid. Soft Matter. PMID 30109341 DOI: 10.1039/C8Sm01085D |
0.192 |
|
| 2003 |
Ekani-Nkodo A, Fygenson DK. Size exclusion and diffusion of fluoresceinated probes within collagen fibrils Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 67: 219091-219097. |
0.19 |
|
| 2020 |
Cai X, Fygenson DK. Single-Molecule Measurement of Short DSDNA and A6-Tract Stiffness and Bending using DNA Nunchucks Biophysical Journal. 118: 66a. DOI: 10.1016/j.bpj.2019.11.536 |
0.187 |
|
| 2012 |
Bertrand OJ, Fygenson DK, Saleh OA. Active, motor-driven mechanics in a DNA gel. Proceedings of the National Academy of Sciences of the United States of America. 109: 17342-7. PMID 23045635 DOI: 10.1073/Pnas.1208732109 |
0.185 |
|
| 2022 |
Conrad N, Chang G, Fygenson DK, Saleh OA. Emulsion imaging of a DNA nanostar condensate phase diagram reveals valence and electrostatic effects. The Journal of Chemical Physics. 157: 234203. PMID 36550026 DOI: 10.1063/5.0130808 |
0.17 |
|
| 1997 |
Bloom LB, Chen X, Fygenson DK, Turner J, O'Donnell M, Goodman MF. Fidelity of Escherichia coli DNA polymerase III holoenzyme. The effects of beta, gamma complex processivity proteins and epsilon proofreading exonuclease on nucleotide misincorporation efficiencies. The Journal of Biological Chemistry. 272: 27919-30. PMID 9346941 DOI: 10.1074/Jbc.272.44.27919 |
0.168 |
|
| 2013 |
Park C, Bertrand OJ, Fygenson DK, Saleh OA. An Active Gel based on DNA and DNA-Associated Motor Proteins Biophysical Journal. 104: 686a. DOI: 10.1016/J.Bpj.2012.11.3788 |
0.166 |
|
| 2016 |
Park CY, Fygenson DK, Saleh OA. Electrostatics and depletion determine competition between 2D nematic and 3D bundled phases of rod-like DNA nanotubes. Soft Matter. PMID 27126684 DOI: 10.1039/C6Sm00222F |
0.155 |
|
| 2003 |
Ross JL, Fygenson DK. Mobility of taxol in microtubule bundles. Biophysical Journal. 84: 3959-67. PMID 12770901 DOI: 10.1016/S0006-3495(03)75123-6 |
0.14 |
|
| 1997 |
Fygenson DK, Chen X, Bloom L, Turnert J, O'Doanellt M, Goodman MF. Fidelity of E. coli DNA polymerase III Holoenzyme: The effects of β γ complex processivity proteins and proofreading exonuclease on nueleotide misincorporation efficiencies Faseb Journal. 11: A1369. |
0.133 |
|
| 2019 |
Conrad N, Kennedy T, Fygenson DK, Saleh OA. Increasing valence pushes DNA nanostar networks to the isostatic point. Proceedings of the National Academy of Sciences of the United States of America. PMID 30914457 DOI: 10.1073/Pnas.1819683116 |
0.133 |
|
| 2015 |
Hendricks GL, Velazquez L, Pham S, Qaisar N, Delaney JC, Viswanathan K, Albers L, Comolli JC, Shriver Z, Knipe DM, Kurt-Jones EA, Fygenson DK, Trevejo JM, Wang JP, Finberg RW. Heparin octasaccharide decoy liposomes inhibit replication of multiple viruses. Antiviral Research. 116: 34-44. PMID 25637710 DOI: 10.1016/J.Antiviral.2015.01.008 |
0.133 |
|
| 2004 |
Ross JL, Santangelo CD, Makrides V, Fygenson DK. Tau induces cooperative Taxol binding to microtubules. Proceedings of the National Academy of Sciences of the United States of America. 101: 12910-5. PMID 15326286 DOI: 10.1073/Pnas.0402928101 |
0.128 |
|
| 2008 |
Park H, Kim M, Fygenson DK. Tau-isoform dependent enhancement of taxol mobility through microtubules. Archives of Biochemistry and Biophysics. 478: 119-26. PMID 18691553 DOI: 10.1016/J.Abb.2008.07.020 |
0.127 |
|
| 2008 |
Pennathur S, Fygenson DK. Improving fluorescence detection in lab on chip devices Lab On a Chip - Miniaturisation For Chemistry and Biology. 8: 649-652. PMID 18432330 DOI: 10.1039/b805064n |
0.124 |
|
| 2007 |
Schachar RA, Fygenson DK. Topographical changes of biconvex objects during equatorial traction: An analogy for accommodation of the human lens British Journal of Ophthalmology. 91: 1698-1703. PMID 16837546 DOI: 10.1136/bjo.2006.094888 |
0.115 |
|
| 2012 |
Puliafito A, Hufnagel L, Neveu P, Streichan S, Sigal A, Fygenson DK, Shraiman BI. Collective and single cell behavior in epithelial contact inhibition. Proceedings of the National Academy of Sciences of the United States of America. 109: 739-44. PMID 22228306 DOI: 10.1073/Pnas.1007809109 |
0.093 |
|
| 2003 |
Gutsmann T, Fantner GE, Venturoni M, Ekani-Nkodo A, Thompson JB, Kindt JH, Morse DE, Fygenson DK, Hansma PK. Evidence that collagen fibrils in tendons are inhomogeneously structured in a tubelike manner. Biophysical Journal. 84: 2593-8. PMID 12668467 DOI: 10.1016/S0006-3495(03)75064-4 |
0.083 |
|
| 1992 |
Cornell EA, Boyce KR, Fygenson DL, Pritchard DE. Two ions in a Penning trap: Implications for precision mass spectroscopy. Physical Review. A. 45: 3049-3059. PMID 9907340 DOI: 10.1103/Physreva.45.3049 |
0.043 |
|
| Hide low-probability matches. |
