| Year |
Citation |
Score |
| 2023 |
O'Connor C, Keele GR, Martin W, Stodola T, Gatti D, Hoffman BR, Korstanje R, Churchill GA, Reinholdt LG. Cell morphology QTL reveal gene by environment interactions in a genetically diverse cell population. Biorxiv : the Preprint Server For Biology. PMID 38014303 DOI: 10.1101/2023.11.18.567597 |
0.334 |
|
| 2022 |
Vincent M, Gerdes Gyuricza I, Keele GR, Gatti DM, Keller MP, Broman KW, Churchill GA. QTLViewer: An interactive webtool for genetic analysis in the Collaborative Cross and Diversity Outbred mouse populations. G3 (Bethesda, Md.). PMID 35703938 DOI: 10.1093/g3journal/jkac146 |
0.362 |
|
| 2022 |
Parker CC, Philip VM, Gatti DM, Kasparek S, Kreuzman AM, Kuffler L, Mansky B, Masneuf S, Sharif K, Sluys E, Taterra D, Taylor WM, Thomas M, Polesskaya O, Palmer AA, et al. Genome-wide association mapping of ethanol sensitivity in the Diversity Outbred mouse population. Alcoholism, Clinical and Experimental Research. PMID 35383961 DOI: 10.1111/acer.14825 |
0.349 |
|
| 2020 |
Ouellette AR, Neuner SM, Dumitrescu L, Anderson LC, Gatti DM, Mahoney ER, Bubier JA, Churchill G, Peters L, Huentelman MJ, Herskowitz JH, Yang HS, Smith AN, Reitz C, Kunkle BW, et al. Cross-Species Analyses Identify Dlgap2 as a Regulator of Age-Related Cognitive Decline and Alzheimer's Dementia. Cell Reports. 32: 108091. PMID 32877673 DOI: 10.1016/J.Celrep.2020.108091 |
0.35 |
|
| 2020 |
Skelly DA, Czechanski A, Byers C, Aydin S, Spruce C, Olivier C, Choi K, Gatti DM, Raghupathy N, Keele GR, Stanton A, Vincent M, Dion S, Greenstein I, Pankratz M, et al. Mapping the Effects of Genetic Variation on Chromatin State and Gene Expression Reveals Loci That Control Ground State Pluripotency. Cell Stem Cell. PMID 32795400 DOI: 10.1016/J.Stem.2020.07.005 |
0.463 |
|
| 2020 |
You D, Lyn-Cook LE, Gatti DM, Bell N, Mayeux PR, James LP, Mattes WB, Larson GJ, Harrill AH. Nitrosative stress and lipid homeostasis as a mechanism for zileuton hepatotoxicity and resistance in genetically sensitive mice. Toxicological Sciences : An Official Journal of the Society of Toxicology. PMID 32170957 DOI: 10.1093/Toxsci/Kfaa037 |
0.35 |
|
| 2020 |
Keenan BT, Galante RJ, Lian J, Simecek P, Gatti DM, Zhang L, Lim DC, Svenson KL, Churchill GA, Pack AI. High-throughput sleep phenotyping produces robust and heritable traits in Diversity Outbred mice and their founder strains. Sleep. PMID 32074270 DOI: 10.1093/Sleep/Zsz278 |
0.344 |
|
| 2019 |
Kemis JH, Linke V, Barrett KL, Boehm FJ, Traeger LL, Keller MP, Rabaglia ME, Schueler KL, Stapleton DS, Gatti DM, Churchill GA, Amador-Noguez D, Russell JD, Yandell BS, Broman KW, et al. Genetic determinants of gut microbiota composition and bile acid profiles in mice. Plos Genetics. 15: e1008073. PMID 31465442 DOI: 10.1371/Journal.Pgen.1008073 |
0.445 |
|
| 2019 |
Keller MP, Rabaglia ME, Schueler KL, Stapleton DS, Gatti DM, Vincent M, Mitok KA, Wang Z, Ishimura T, Simonett SP, Emfinger CH, Das R, Beck T, Kendziorski C, Broman KW, et al. Gene loci associated with insulin secretion in islets from non-diabetic mice. The Journal of Clinical Investigation. 130. PMID 31343992 DOI: 10.1172/Jci129143 |
0.355 |
|
| 2019 |
Recla JM, Bubier JA, Gatti DM, Ryan JL, Long KH, Robledo RF, Glidden NC, Hou G, Churchill GA, Maser RS, Zhang ZW, Young EE, Chesler EJ, Bult CJ. Genetic mapping in Diversity Outbred mice identifies a Trpa1 variant influencing late-phase formalin response. Pain. 160: 1740-1753. PMID 31335644 DOI: 10.1097/J.Pain.0000000000001571 |
0.448 |
|
| 2019 |
Zeiss CJ, Gatti DM, Toro-Salazar O, Davis C, Lutz CM, Spinale F, Stearns T, Furtado MB, Churchill GA. Doxorubicin-Induced Cardiotoxicity in Collaborative Cross (CC) Mice Recapitulates Individual Cardiotoxicity in Humans. G3 (Bethesda, Md.). PMID 31263061 DOI: 10.1534/G3.119.400232 |
0.329 |
|
| 2019 |
Mesner LD, Calabrese GM, Al-Barghouthi B, Gatti DM, Sundberg JP, Churchill GA, Godfrey DA, Ackert-Bicknell CL, Farber CR. Mouse genome-wide association and systems genetics identifies Lhfp as a regulator of bone mass. Plos Genetics. 15: e1008123. PMID 31042701 DOI: 10.1371/Journal.Pgen.1008123 |
0.394 |
|
| 2019 |
Recla JM, Bubier JA, Gatti DM, Ryan JL, Long KH, Robledo RF, Glidden NC, Hou G, Churchill GA, Maser RS, Zhang ZW, Young EE, Chesler EJ, Bult CJ. Genetic mapping in Diversity Outbred mice identifies a Trpa1 variant influencing late-phase formalin response. Pain. PMID 30925521 DOI: 10.1097/j.pain.0000000000001571 |
0.347 |
|
| 2019 |
Broman KW, Gatti DM, Svenson KL, Sen Ś, Churchill GA. Cleaning Genotype Data from Diversity Outbred Mice. G3 (Bethesda, Md.). PMID 30877082 DOI: 10.1534/G3.119.400165 |
0.42 |
|
| 2018 |
Broman KW, Gatti DM, Simecek P, Furlotte NA, Prins P, Sen Ś, Yandell BS, Churchill GA. R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multi-parent Populations. Genetics. PMID 30591514 DOI: 10.1534/Genetics.118.301595 |
0.38 |
|
| 2018 |
Shorter JR, Huang W, Beak JY, Hua K, Gatti DM, de Villena FP, Pomp D, Jensen BC. Correction to: Quantitative trait mapping in Diversity Outbred mice identifies two genomic regions associated with heart size. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 30515527 DOI: 10.1007/S00335-018-9789-9 |
0.355 |
|
| 2018 |
Yuan JT, Gatti DM, Philip VM, Kasparek S, Kreuzman AM, Mansky B, Sharif K, Taterra D, Taylor WM, Thomas M, Ward JO, Holmes A, Chesler EJ, Parker CC. Genome-wide association for testis weight in the diversity outbred mouse population. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 29691636 DOI: 10.1007/S00335-018-9745-8 |
0.502 |
|
| 2018 |
Keller MP, Gatti DM, Schueler KL, Rabaglia ME, Stapleton DS, Simecek P, Vincent M, Allen S, Broman AT, Bacher R, Kendziorski C, Broman KW, Yandell BS, Churchill GA, Attie AD. Genetic Drivers of Pancreatic Islet Function. Genetics. PMID 29567659 DOI: 10.1534/Genetics.118.300864 |
0.431 |
|
| 2018 |
Percival CJ, Green R, Roseman CC, Gatti DM, Morgan JL, Murray SA, Donahue LR, Mayeux JM, Pollard KM, Hua K, Pomp D, Marcucio R, Hallgrímsson B. Developmental constraint through negative pleiotropy in the zygomatic arch. Evodevo. 9: 3. PMID 29423138 DOI: 10.1186/S13227-018-0092-3 |
0.375 |
|
| 2017 |
Shorter JR, Huang W, Beak JY, Hua K, Gatti DM, de Villena FP, Pomp D, Jensen BC. Quantitative trait mapping in Diversity Outbred mice identifies two genomic regions associated with heart size. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 29279960 DOI: 10.1007/S00335-017-9730-7 |
0.355 |
|
| 2017 |
Keele GR, Prokop JW, He H, Holl K, Littrell J, Deal A, Francic S, Cui L, Gatti DM, Broman KW, Tschannen M, Tsaih SW, Zagloul M, Kim Y, Baur B, et al. Genetic Fine-Mapping and Identification of Candidate Genes and Variants for Adiposity Traits in Outbred Rats. Obesity (Silver Spring, Md.). PMID 29193816 DOI: 10.1002/Oby.22075 |
0.404 |
|
| 2017 |
Gatti DM, Weber SN, Goodwin NC, Lammert F, Churchill GA. Genetic background influences susceptibility to chemotherapy-induced hematotoxicity. The Pharmacogenomics Journal. 18: 319-330. PMID 28607509 DOI: 10.1038/Tpj.2017.23 |
0.395 |
|
| 2017 |
Tyler AL, Ji B, Gatti DM, Munger SC, Churchill GA, Svenson KL, Carter GW. Epistatic Networks Jointly Influence Phenotypes Related to Metabolic Disease and Gene Expression in Diversity Outbred Mice. Genetics. 206: 621-639. PMID 28592500 DOI: 10.1534/Genetics.116.198051 |
0.501 |
|
| 2017 |
Morgan AP, Gatti DM, Najarian ML, Keane TM, Galante RJ, Pack AI, Mott R, Churchill GA, de Villena FP. Structural Variation Shapes the Landscape of Recombination in Mouse. Genetics. 206: 603-619. PMID 28592499 DOI: 10.1534/Genetics.116.197988 |
0.461 |
|
| 2017 |
Gatti D, French JE, Schughart K. QTL Mapping and Identification of Candidate Genes in DO Mice: A Use Case Model Derived from a Benzene Toxicity Experiment. Methods in Molecular Biology (Clifton, N.J.). 1488: 265-281. PMID 27933529 DOI: 10.1007/978-1-4939-6427-7_12 |
0.503 |
|
| 2016 |
Winter JM, Gildea DE, Andreas JP, Gatti DM, Williams KA, Lee M, Hu Y, Zhang S, Mullikin JC, Wolfsberg TG, McDonnell SK, Fogarty ZC, Larson MC, French AJ, et al. Mapping Complex Traits in a Diversity Outbred F1 Mouse Population Identifies Germline Modifiers of Metastasis in Human Prostate Cancer. Cell Systems. PMID 27916600 DOI: 10.1016/J.Cels.2016.10.018 |
0.378 |
|
| 2016 |
Chesler EJ, Gatti DM, Morgan AP, Strobel M, Trepanier L, Oberbeck D, McWeeney S, Hitzemann R, Ferris M, McMullan R, Clayshultle A, Bell TA, Pardo-Manuel de Villena F, Churchill GA. Diversity Outbred Mice at 21: Maintaining Allelic Variation in the Face of Selection. G3 (Bethesda, Md.). PMID 27694113 DOI: 10.1534/G3.116.035527 |
0.451 |
|
| 2016 |
Chick JM, Munger SC, Simecek P, Huttlin EL, Choi K, Gatti DM, Raghupathy N, Svenson KL, Churchill GA, Gygi SP. Defining the consequences of genetic variation on a proteome-wide scale. Nature. PMID 27309819 DOI: 10.1038/Nature18270 |
0.424 |
|
| 2016 |
Didion JP, Morgan AP, Yadgary L, Bell TA, McMullan RC, Ortiz de Solorzano L, Britton-Davidian J, Bult CJ, Campbell KJ, Castiglia R, Ching YH, Chunco AJ, Crowley JJ, Chesler EJ, Förster DW, ... ... Gatti DM, et al. R2d2 drives selfish sweeps in the house mouse. Molecular Biology and Evolution. PMID 26882987 DOI: 10.1093/Molbev/Msw036 |
0.453 |
|
| 2016 |
Gu T, Gatti DM, Srivastava A, Snyder EM, Raghupathy N, Simecek P, Svenson KL, Dotu I, Chuang JH, Keller MP, Attie AD, Braun RE, Churchill GA. Genetic Architectures of Quantitative Variation in RNA Editing Pathways. Genetics. 202: 787-98. PMID 26614740 DOI: 10.1534/Genetics.115.179481 |
0.343 |
|
| 2015 |
Dell'Acqua M, Gatti DM, Pea G, Cattonaro F, Coppens F, Magris G, Hlaing AL, Aung HH, Nelissen H, Baute J, Frascaroli E, Churchill GA, Inzé D, Morgante M, Pè ME. Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays. Genome Biology. 16: 167. PMID 26357913 DOI: 10.1186/S13059-015-0716-Z |
0.472 |
|
| 2015 |
Didion JP, Morgan AP, Clayshulte AM, Mcmullan RC, Yadgary L, Petkov PM, Bell TA, Gatti DM, Crowley JJ, Hua K, Aylor DL, Bai L, Calaway M, Chesler EJ, French JE, et al. A multi-megabase copy number gain causes maternal transmission ratio distortion on mouse chromosome 2. Plos Genetics. 11: e1004850. PMID 25679959 DOI: 10.1371/Journal.Pgen.1004850 |
0.441 |
|
| 2015 |
Church RJ, Gatti DM, Urban TJ, Long N, Yang X, Shi Q, Eaddy JS, Mosedale M, Ballard S, Churchill GA, Navarro V, Watkins PB, Threadgill DW, Harrill AH. Sensitivity to hepatotoxicity due to epigallocatechin gallate is affected by genetic background in diversity outbred mice. Food and Chemical Toxicology : An International Journal Published For the British Industrial Biological Research Association. 76: 19-26. PMID 25446466 DOI: 10.1016/J.Fct.2014.11.008 |
0.385 |
|
| 2015 |
French JE, Gatti DM, Morgan DL, Kissling GE, Shockley KR, Knudsen GA, Shepard KG, Price HC, King D, Witt KL, Pedersen LC, Munger SC, Svenson KL, Churchill GA. Diversity Outbred Mice Identify Population-Based Exposure Thresholds and Genetic Factors that Influence Benzene-Induced Genotoxicity. Environmental Health Perspectives. 123: 237-45. PMID 25376053 DOI: 10.1289/Ehp.1408202 |
0.338 |
|
| 2015 |
Yuan R, Gatti DM, Krier R, Malay E, Schultz D, Peters LL, Churchill GA, Harrison DE, Paigen B. Genetic Regulation of Female Sexual Maturation and Longevity Through Circulating IGF1. The Journals of Gerontology. Series a, Biological Sciences and Medical Sciences. 70: 817-26. PMID 25070661 DOI: 10.1093/Gerona/Glu114 |
0.368 |
|
| 2015 |
Didion JP, Morgan AP, Clayshulte AM-, Mcmullan RC, Yadgary L, Petkov PM, Bell TA, Gatti DM, Crowley JJ, Hua K, Aylor DL, Bai L, Calaway M, Chesler EJ, French JE, et al. R2d maps to a 9.3 Mb candidate interval. Plos Genetics. DOI: 10.1371/Journal.Pgen.1004850.G001 |
0.309 |
|
| 2014 |
Smallwood TL, Gatti DM, Quizon P, Weinstock GM, Jung KC, Zhao L, Hua K, Pomp D, Bennett BJ. High-resolution genetic mapping in the diversity outbred mouse population identifies Apobec1 as a candidate gene for atherosclerosis. G3 (Bethesda, Md.). 4: 2353-63. PMID 25344410 DOI: 10.1534/G3.114.014704 |
0.472 |
|
| 2014 |
Gatti DM, Svenson KL, Shabalin A, Wu LY, Valdar W, Simecek P, Goodwin N, Cheng R, Pomp D, Palmer A, Chesler EJ, Broman KW, Churchill GA. Quantitative trait locus mapping methods for diversity outbred mice. G3 (Bethesda, Md.). 4: 1623-33. PMID 25237114 DOI: 10.1534/G3.114.013748 |
0.498 |
|
| 2014 |
Ram R, Mehta M, Balmer L, Gatti DM, Morahan G. Rapid identification of major-effect genes using the collaborative cross. Genetics. 198: 75-86. PMID 25236450 DOI: 10.1534/Genetics.114.163014 |
0.457 |
|
| 2014 |
Munger SC, Raghupathy N, Choi K, Simons AK, Gatti DM, Hinerfeld DA, Svenson KL, Keller MP, Attie AD, Hibbs MA, Graber JH, Chesler EJ, Churchill GA. RNA-Seq alignment to individualized genomes improves transcript abundance estimates in multiparent populations. Genetics. 198: 59-73. PMID 25236449 DOI: 10.1534/Genetics.114.165886 |
0.365 |
|
| 2014 |
Recla JM, Robledo RF, Gatti DM, Bult CJ, Churchill GA, Chesler EJ. Precise genetic mapping and integrative bioinformatics in Diversity Outbred mice reveals Hydin as a novel pain gene. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 25: 211-22. PMID 24700285 DOI: 10.1007/S00335-014-9508-0 |
0.468 |
|
| 2013 |
Logan RW, Robledo RF, Recla JM, Philip VM, Bubier JA, Jay JJ, Harwood C, Wilcox T, Gatti DM, Bult CJ, Churchill GA, Chesler EJ. High-precision genetic mapping of behavioral traits in the diversity outbred mouse population. Genes, Brain, and Behavior. 12: 424-37. PMID 23433259 DOI: 10.1111/Gbb.12029 |
0.386 |
|
| 2012 |
Churchill GA, Gatti DM, Munger SC, Svenson KL. The Diversity Outbred mouse population Mammalian Genome. 23: 713-718. PMID 22892839 DOI: 10.1007/S00335-012-9414-2 |
0.503 |
|
| 2012 |
Svenson KL, Gatti DM, Valdar W, Welsh CE, Cheng R, Chesler EJ, Palmer AA, McMillan L, Churchill GA. High-resolution genetic mapping using the Mouse Diversity outbred population. Genetics. 190: 437-47. PMID 22345611 DOI: 10.1534/Genetics.111.132597 |
0.5 |
|
| 2012 |
Iraqi FA, Mahajne M, Salaymah Y, Sandovski H, Tayem H, Vered K, Balmer L, Hall M, Manship G, Morahan G, Pettit K, Scholten J, Tweedie K, Wallace A, Weerasekera L, ... ... Gatti DM, et al. The genome architecture of the collaborative cross mouse genetic reference population Genetics. 190: 389-401. PMID 22345608 DOI: 10.1534/Genetics.111.132639 |
0.634 |
|
| 2011 |
Gatti DM, Lu L, Williams RW, Sun W, Wright FA, Threadgill DW, Rusyn I. MicroRNA expression in the livers of inbred mice. Mutation Research. 714: 126-33. PMID 21616085 DOI: 10.1016/J.Mrfmmm.2011.05.007 |
0.533 |
|
| 2010 |
Gatti DM, Barry WT, Nobel AB, Rusyn I, Wright FA. Heading down the wrong pathway: on the influence of correlation within gene sets. Bmc Genomics. 11: 574. PMID 20955544 DOI: 10.1186/1471-2164-11-574 |
0.526 |
|
| 2010 |
Rusyn I, Gatti DM, Wiltshire T, Wilshire T, Kleeberger SR, Threadgill DW. Toxicogenetics: population-based testing of drug and chemical safety in mouse models. Pharmacogenomics. 11: 1127-36. PMID 20704464 DOI: 10.2217/Pgs.10.100 |
0.566 |
|
| 2010 |
Gatti DM, Zhao N, Chesler EJ, Bradford BU, Shabalin AA, Yordanova R, Lu L, Rusyn I. Sex-specific gene expression in the BXD mouse liver. Physiological Genomics. 42: 456-68. PMID 20551147 DOI: 10.1152/Physiolgenomics.00110.2009 |
0.624 |
|
| 2010 |
Rusyn I, Gatti DM, Wiltshire T, Kleeberger SR, Threadgill DW. Erratum: Toxicogenetics: Population-based testing of drug and chemical safety in mouse models (Pharmacogenomics (2010) 11:8 (1127-1136)) Pharmacogenomics. 11. DOI: 10.2217/Pgs.10.148 |
0.48 |
|
| 2009 |
Gatti DM, Harrill AH, Wright FA, Threadgill DW, Rusyn I. Replication and narrowing of gene expression quantitative trait loci using inbred mice. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 20: 437-46. PMID 19609828 DOI: 10.1007/S00335-009-9199-0 |
0.625 |
|
| 2009 |
Harrill AH, Ross PK, Gatti DM, Threadgill DW, Rusyn I. Population-based discovery of toxicogenomics biomarkers for hepatotoxicity using a laboratory strain diversity panel. Toxicological Sciences : An Official Journal of the Society of Toxicology. 110: 235-43. PMID 19420014 DOI: 10.1093/Toxsci/Kfp096 |
0.608 |
|
| 2009 |
Ross PK, Woods CG, Bradford BU, Kosyk O, Gatti DM, Cunningham ML, Rusyn I. Time-course comparison of xenobiotic activators of CAR and PPARalpha in mouse liver. Toxicology and Applied Pharmacology. 235: 199-207. PMID 19136022 DOI: 10.1016/J.Taap.2008.12.011 |
0.646 |
|
| 2009 |
Gatti DM, Sypa M, Rusyn I, Wright FA, Barry WT. SAFEGUI: resampling-based tests of categorical significance in gene expression data made easy. Bioinformatics (Oxford, England). 25: 541-2. PMID 19098030 DOI: 10.1093/Bioinformatics/Btn655 |
0.54 |
|
| 2009 |
Gatti DM, Shabalin AA, Lam TC, Wright FA, Rusyn I, Nobel AB. FastMap: fast eQTL mapping in homozygous populations. Bioinformatics (Oxford, England). 25: 482-9. PMID 19091771 DOI: 10.1093/Bioinformatics/Btn648 |
0.575 |
|
| 2007 |
Gatti D, Maki A, Chesler EJ, Kirova R, Kosyk O, Lu L, Manly KF, Williams RW, Perkins A, Langston MA, Threadgill DW, Rusyn I. Genome-level analysis of genetic regulation of liver gene expression networks. Hepatology (Baltimore, Md.). 46: 548-57. PMID 17542012 DOI: 10.1002/Hep.21682 |
0.645 |
|
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