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Andrey G. Revyakin, Ph.D. - Publications

Affiliations: 
2003 Rutgers University, New Brunswick, New Brunswick, NJ, United States 
Area:
Molecular Biology, General Biophysics
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17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Park SR, Hauver J, Zhang Y, Revyakin A, Coleman RA, Tjian R, Chu S, Pertsinidis A. A Single-Molecule Surface-Based Platform to Detect the Assembly and Function of the Human RNA Polymerase II Transcription Machinery. Structure (London, England : 1993). PMID 32763141 DOI: 10.1016/J.Str.2020.07.009  0.372
2020 Cunnison RF, Teece E, Grimm J, Lavis LD, Temiakov D, Morozov Y, Revyakin AG. Single-Molecule Dynamics of the Human Mitochondrial RNA Polymerase Preinitiation Complex Biophysical Journal. 118: 465a. DOI: 10.1016/J.Bpj.2019.11.2581  0.404
2020 Cunnison R, Gonchar O, Grimm J, Lavis L, Zhang Z, Revyakin AG. Single-Molecule Dynamics of the Human RNA Polymerase II Preinitiation Complex Biophysical Journal. 118: 188a. DOI: 10.1016/J.Bpj.2019.11.1142  0.418
2016 Zhang Z, English BP, Grimm JB, Kazane SA, Hu W, Tsai A, Inouye C, You C, Piehler J, Schultz PG, Lavis LD, Revyakin A, Tjian R. Rapid dynamics of general transcription factor TFIIB binding during preinitiation complex assembly revealed by single-molecule analysis. Genes & Development. 30: 2106-2118. PMID 27798851 DOI: 10.1101/Gad.285395.116  0.425
2014 Chen J, Zhang Z, Li L, Chen BC, Revyakin A, Hajj B, Legant W, Dahan M, Lionnet T, Betzig E, Tjian R, Liu Z. Single-molecule dynamics of enhanceosome assembly in embryonic stem cells. Cell. 156: 1274-85. PMID 24630727 DOI: 10.1016/J.Cell.2014.01.062  0.491
2014 Zhang Z, Revyakin A, Grimm JB, Lavis LD, Tjian R. Single-molecule tracking of the transcription cycle by sub-second RNA detection. Elife. 3: e01775. PMID 24473079 DOI: 10.7554/Elife.01775  0.416
2013 Zhang Z, Revyakin A, Grimm JB, Lavis LD, Tjian R. Author response: Single-molecule tracking of the transcription cycle by sub-second RNA detection Elife. DOI: 10.7554/Elife.01775.017  0.41
2013 Zhang Z, Revyakin A, Coleman R, Chu S, Tjian R. Single-Molecule Insights on Human RNA Polymerase II Transcription Regulation: Assembly of the Pre-Initiation Complex and the Roles of Activators Biophysical Journal. 104: 365a-366a. DOI: 10.1016/J.Bpj.2012.11.2029  0.598
2012 Revyakin A, Zhang Z, Coleman RA, Li Y, Inouye C, Lucas JK, Park SR, Chu S, Tjian R. Transcription initiation by human RNA polymerase II visualized at single-molecule resolution. Genes & Development. 26: 1691-702. PMID 22810624 DOI: 10.1101/Gad.194936.112  0.524
2012 Lionnet T, Allemand JF, Revyakin A, Strick TR, Saleh OA, Bensimon D, Croquette V. Magnetic Trap Construction Cold Spring Harbor Protocols. 7: 133-138. PMID 22194260 DOI: 10.1101/Pdb.Prot067496  0.519
2012 Lionnet T, Allemand JF, Revyakin A, Strick TR, Saleh OA, Bensimon D, Croquette V. Single-molecule studies using magnetic traps Cold Spring Harbor Protocols. 7: 34-49. PMID 22194259 DOI: 10.1101/Pdb.Top067488  0.497
2006 Naryshkin N, Revyakin A, Ebright RH. Site-specific protein-DNA photo-cross-linking: analysis of structural organization of protein-DNA and multiprotein-DNA complexes. Csh Protocols. 2006. PMID 22485981 DOI: 10.1101/Pdb.Prot4588  0.683
2006 Revyakin A, Liu C, Ebright RH, Strick TR. Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching. Science (New York, N.Y.). 314: 1139-43. PMID 17110577 DOI: 10.1126/Science.1131398  0.745
2005 Revyakin A, Ebright RH, Strick TR. Single-molecule DNA nanomanipulation: improved resolution through use of shorter DNA fragments. Nature Methods. 2: 127-38. PMID 16156080 DOI: 10.1038/Nmeth0205-127  0.754
2004 Revyakin A, Ebright RH, Strick TR. Promoter unwinding and promoter clearance by RNA polymerase: detection by single-molecule DNA nanomanipulation. Proceedings of the National Academy of Sciences of the United States of America. 101: 4776-80. PMID 15037753 DOI: 10.1073/Pnas.0307241101  0.767
2003 Revyakin A, Allemand JF, Croquette V, Ebright RH, Strick TR. Single-Molecule DNA Nanomanipulation: Detection of Promoter-Unwinding Events by RNA Polymerase Methods in Enzymology. 370: 577-598. PMID 14712677 DOI: 10.1016/S0076-6879(03)70049-4  0.777
2000 Naryshkin N, Revyakin A, Kim Y, Mekler V, Ebright RH. Structural organization of the RNA polymerase-promoter open complex. Cell. 101: 601-11. PMID 10892647 DOI: 10.1016/S0092-8674(00)80872-7  0.647
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