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Mark A. Chapman - Publications

Affiliations: 
University of Georgia, Athens, Athens, GA, United States 
Area:
Speciation, domestication, gene family evolution, floral development

59 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 He Y, Zhang K, Shi Y, Lin H, Huang X, Lu X, Wang Z, Li W, Feng X, Shi T, Chen Q, Wang J, Tang Y, Chapman MA, Germ M, et al. Genomic insight into the origin, domestication, dispersal, diversification and human selection of Tartary buckwheat. Genome Biology. 25: 61. PMID 38414075 DOI: 10.1186/s13059-024-03203-z  0.315
2023 Zhang K, He Y, Lu X, Shi Y, Zhao H, Li X, Li J, Liu Y, Ouyang Y, Tang Y, Ren X, Zhang X, Yang W, Sun Z, Zhang C, ... ... Chapman MA, et al. Comparative and population genomics of buckwheat species reveal key determinants of flavor and fertility. Molecular Plant. PMID 37649255 DOI: 10.1016/j.molp.2023.08.013  0.416
2023 Bedford JA, Carine M, Chapman MA. Detection of locally adapted genomic regions in wild rice (Oryza rufipogon) using environmental association analysis. G3 (Bethesda, Md.). PMID 37619981 DOI: 10.1093/g3journal/jkad194  0.326
2023 White OW, Reyes-Betancort A, Carine MA, Chapman MA. Comparative transcriptomics and gene expression divergence associated with homoploid hybrid speciation in Argyranthemum. G3 (Bethesda, Md.). PMID 37477910 DOI: 10.1093/g3journal/jkad158  0.307
2023 Dwivedi SL, Chapman MA, Abberton MT, Akpojotor UL, Ortiz R. Exploiting genetic and genomic resources to enhance productivity and abiotic stress adaptation of underutilized pulses. Frontiers in Genetics. 14: 1193780. PMID 37396035 DOI: 10.3389/fgene.2023.1193780  0.374
2023 Njaci I, Waweru B, Kamal N, Muktar MS, Fisher D, Gundlach H, Muli C, Muthui L, Maranga M, Kiambi D, Maass BL, Emmrich PMF, Domelevo Entfellner JB, Spannagl M, Chapman MA, et al. Chromosome-level genome assembly and population genomic resource to accelerate orphan crop lablab breeding. Nature Communications. 14: 1915. PMID 37069152 DOI: 10.1038/s41467-023-37489-7  0.38
2023 Saban JM, Romero AJ, Ezard THG, Chapman MA. Extensive crop-wild hybridisation during Brassica evolution, and selection during the domestication and diversification of Brassica crops. Genetics. PMID 36810660 DOI: 10.1093/genetics/iyad027  0.503
2022 He M, He Y, Zhang K, Lu X, Zhang X, Gao B, Fan Y, Zhao H, Jha R, Huda MN, Tang Y, Wang J, Yang W, Yan M, Cheng J, ... ... Chapman MA, et al. Comparison of buckwheat genomes reveals the genetic basis of metabolomic divergence and ecotype differentiation. The New Phytologist. PMID 35701896 DOI: 10.1111/nph.18306  0.414
2022 Chapman MA, He Y, Zhou M. Beyond a reference genome: pangenomes and population genomics of underutilized and orphan crops for future food and nutrition security. The New Phytologist. PMID 35318683 DOI: 10.1111/nph.18021  0.406
2021 Page AML, Chapman MA. Identifying genomic regions targeted during eggplant domestication using transcriptome data. The Journal of Heredity. PMID 34130314 DOI: 10.1093/jhered/esab035  0.45
2020 Damerum A, Chapman MA, Taylor G. Innovative breeding technologies in lettuce for improved post-harvest quality. Postharvest Biology and Technology. 168: 111266. PMID 33012992 DOI: 10.1016/J.Postharvbio.2020.111266  0.429
2020 White OW, Reyes-Betancort JA, Chapman MA, Carine MA. Geographical isolation, habitat shifts and hybridisation in the diversification of the Macaronesian endemic genus Argyranthemum (Asteraceae). The New Phytologist. PMID 33006142 DOI: 10.1111/nph.16980  0.324
2020 Saban JM, Watson-Lazowski A, Chapman MA, Taylor G. The methylome is altered for plants in a high CO world: Insights into the response of a wild plant population to multigenerational exposure to elevated atmospheric [CO ]. Global Change Biology. PMID 32902071 DOI: 10.1111/Gcb.15249  0.471
2020 Walter GM, Abbott RJ, Brennan AC, Bridle JR, Chapman M, Clark J, Filatov D, Nevado B, Ortiz-Barrientos D, Hiscock SJ. Senecio as a model system for integrating studies of genotype, phenotype and fitness. The New Phytologist. PMID 31951018 DOI: 10.1111/Nph.16434  0.479
2020 Mohanty CS, Singh V, Chapman MA. Winged bean: An underutilized tropical legume on the path of improvement, to help mitigate food and nutrition security Scientia Horticulturae. 260: 108789. DOI: 10.1016/J.Scienta.2019.108789  0.371
2020 Muraguri S, Xu W, Chapman M, Muchugi A, Oluwaniyi A, Oyebanji O, Liu A. Intraspecific variation within Castor bean (Ricinus communis L.) based on chloroplast genomes Industrial Crops and Products. 155: 112779. DOI: 10.1016/J.Indcrop.2020.112779  0.526
2019 Chapman MA. Optimizing depth and type of high-throughput sequencing data for microsatellite discovery. Applications in Plant Sciences. 7: e11298. PMID 31832281 DOI: 10.1002/Aps3.11298  0.414
2019 Xu W, Yang T, Qiu L, Chapman MA, Li DZ, Liu A. Genomic analysis reveals rich genetic variation and potential targets of selection during domestication of castor bean from perennial woody tree to annual semi-woody crop. Plant Direct. 3: e00173. PMID 31641699 DOI: 10.1002/pld3.173  0.513
2019 Page A, Gibson J, Meyer RS, Chapman MA. Eggplant domestication: pervasive gene flow, feralisation and transcriptomic divergence. Molecular Biology and Evolution. PMID 31039581 DOI: 10.1093/Molbev/Msz062  0.553
2019 Wort EJG, Chapman MA, Hawkins SJ, Henshall L, Pita A, Rius M, Williams ST, Fenberg PB. Contrasting genetic structure of sympatric congeneric gastropods: Do differences in habitat preference, abundance and distribution matter? Journal of Biogeography. 46: 369-380. DOI: 10.1111/Jbi.13502  0.431
2018 Saban JM, Chapman MA, Taylor G. FACE facts hold for multiple generations; Evidence from natural CO springs. Global Change Biology. PMID 30422366 DOI: 10.1111/Gcb.14437  0.363
2018 Foyer CH, Siddique KHM, Tai APK, Anders S, Fodor N, Wong FL, Ludidi N, Chapman MA, Ferguson BJ, Considine MJ, Zabel F, Prasad PVV, Varshney RK, Nguyen HT, Lam HM. Modelling predicts that soybean is poised to dominate crop production across Africa. Plant, Cell & Environment. PMID 30329164 DOI: 10.1111/Pce.13466  0.301
2018 White OW, Reyes-Betancort A, Chapman MA, Carine MA. Independent Homoploid Hybrid Speciation events in the Macaronesian endemic genus Argyranthemum. Molecular Ecology. PMID 30281862 DOI: 10.1111/Mec.14889  0.366
2018 Yang S, Grall A, Chapman MA. Origin and diversification of winged bean (Psophocarpus tetragonolobus (L.) DC.), a multipurpose underutilized legume. American Journal of Botany. PMID 29874397 DOI: 10.1002/Ajb2.1093  0.439
2016 White OW, Doo B, Carine MA, Chapman MA. Transcriptome sequencing and simple sequence repeat marker development for three Macaronesian endemic plant species. Applications in Plant Sciences. 4. PMID 27610280 DOI: 10.3732/Apps.1600050  0.471
2016 Watson-Lazowski A, Lin Y, Miglietta F, Edwards RJ, Chapman MA, Taylor G. Plant adaptation or acclimation to rising CO2 ? Insight from first multigenerational RNA-Seq transcriptome. Global Change Biology. PMID 27539677 DOI: 10.1111/Gcb.13322  0.432
2016 Alexander-Webber D, Abbott RJ, Chapman MA. Morphological convergence between an allopolyploid and one of its parental species correlates with biased gene expression and DNA loss. The Journal of Heredity. PMID 27217580 DOI: 10.1093/Jhered/Esw035  0.389
2016 Voutsina N, Payne AC, Hancock RD, Clarkson GJ, Rothwell SD, Chapman MA, Taylor G. Characterization of the watercress (Nasturtium officinale R. Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health. Bmc Genomics. 17: 378. PMID 27206485 DOI: 10.1186/S12864-016-2704-4  0.436
2016 Osborne O, Chapman M, Nevado B, Filatov D. Maintenance of species boundaries despite ongoing gene flow in ragworts. Genome Biology and Evolution. PMID 26979797 DOI: 10.1093/Gbe/Evw053  0.418
2016 Maass BL, Robotham O, Chapman MA. Evidence for two domestication events of hyacinth bean (Lablab purpureus (L.) Sweet): a comparative analysis of population genetic data Genetic Resources and Crop Evolution. 1-10. DOI: 10.1007/S10722-016-0431-Y  0.461
2015 Damerum A, Selmes SL, Biggi GF, Clarkson GJ, Rothwell SD, Truco MJ, Michelmore RW, Hancock RD, Shellcock C, Chapman MA, Taylor G. Elucidating the genetic basis of antioxidant status in lettuce (Lactuca sativa). Horticulture Research. 2: 15055. PMID 26640696 DOI: 10.1038/Hortres.2015.55  0.497
2015 Chapman MA, Hiscock SJ, Filatov DA. The genomic bases of morphological divergence and reproductive isolation driven by ecological speciation in Senecio (Asteraceae). Journal of Evolutionary Biology. PMID 26414668 DOI: 10.1111/Jeb.12765  0.511
2015 Chapman MA. Transcriptome sequencing and marker development for four underutilized legumes. Applications in Plant Sciences. 3. PMID 25699221 DOI: 10.3732/Apps.1400111  0.52
2015 Rius M, Bourne S, Hornsby HG, Chapman MA. Applications of next-generation sequencing to the study of biological invasions Current Zoology. 61: 488-504. DOI: 10.1093/Czoolo/61.3.488  0.483
2015 Robotham O, Chapman M. Population genetic analysis of hyacinth bean (Lablab purpureus (L.) Sweet, Leguminosae) indicates an East African origin and variation in drought tolerance Genetic Resources and Crop Evolution. DOI: 10.1007/S10722-015-0339-Y  0.469
2013 Chapman MA, Hiscock SJ, Filatov DA. Genomic divergence during speciation driven by adaptation to altitude. Molecular Biology and Evolution. 30: 2553-67. PMID 24077768 DOI: 10.1093/Molbev/Mst168  0.511
2013 Chapman MA, Mandel JR, Burke JM. Sequence validation of candidates for selectively important genes in sunflower. Plos One. 8: e71941. PMID 23991009 DOI: 10.1371/Journal.Pone.0071941  0.758
2012 Staton SE, Bakken BH, Blackman BK, Chapman MA, Kane NC, Tang S, Ungerer MC, Knapp SJ, Rieseberg LH, Burke JM. The sunflower (Helianthus annuus L.) genome reflects a recent history of biased accumulation of transposable elements. The Plant Journal : For Cell and Molecular Biology. 72: 142-53. PMID 22691070 DOI: 10.1111/J.1365-313X.2012.05072.X  0.747
2012 Chapman MA, Burke JM. Evidence of selection on fatty acid biosynthetic genes during the evolution of cultivated sunflower. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 125: 897-907. PMID 22580969 DOI: 10.1007/S00122-012-1881-Z  0.653
2012 Chapman MA, Tang S, Draeger D, Nambeesan S, Shaffer H, Barb JG, Knapp SJ, Burke JM. Genetic analysis of floral symmetry in Van Gogh's sunflowers reveals independent recruitment of CYCLOIDEA genes in the Asteraceae. Plos Genetics. 8: e1002628. PMID 22479210 DOI: 10.1371/Journal.Pgen.1002628  0.585
2010 Chapman MA, Hvala J, Strever J, Burke JM. Population genetic analysis of safflower (Carthamus tinctorius; Asteraceae) reveals a Near Eastern origin and five centers of diversity. American Journal of Botany. 97: 831-40. PMID 21622448 DOI: 10.3732/Ajb.0900137  0.606
2010 Chapman MA, Abbott RJ. Introgression of fitness genes across a ploidy barrier. The New Phytologist. 186: 63-71. PMID 19912548 DOI: 10.1111/J.1469-8137.2009.03091.X  0.329
2010 McKain MR, Chapman MA, Ingram AL. Confirmation of the hybrid origin of Eupatorium Ă—truncatum (Asteraceae) using nuclear and plastid markers Castanea. 75: 381-387. DOI: 10.2179/09-043.1  0.324
2009 Chapman MA, Hvala J, Strever J, Matvienko M, Kozik A, Michelmore RW, Tang S, Knapp SJ, Burke JM. Development, polymorphism, and cross-taxon utility of EST-SSR markers from safflower (Carthamus tinctorius L.). Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 120: 85-91. PMID 19820913 DOI: 10.1007/S00122-009-1161-8  0.61
2009 Dechaine JM, Burger JC, Chapman MA, Seiler GJ, Brunick R, Knapp SJ, Burke JM. Fitness effects and genetic architecture of plant-herbivore interactions in sunflower crop-wild hybrids. The New Phytologist. 184: 828-41. PMID 19656303 DOI: 10.1111/J.1469-8137.2009.02964.X  0.693
2008 Burger JC, Chapman MA, Burke JM. Molecular insights into the evolution of crop plants. American Journal of Botany. 95: 113-22. PMID 21632337 DOI: 10.3732/Ajb.95.2.113  0.766
2008 Chapman MA, Pashley CH, Wenzler J, Hvala J, Tang S, Knapp SJ, Burke JM. A genomic scan for selection reveals candidates for genes involved in the evolution of cultivated sunflower (Helianthus annuus). The Plant Cell. 20: 2931-45. PMID 19017747 DOI: 10.1105/Tpc.108.059808  0.649
2008 Kim M, Cui ML, Cubas P, Gillies A, Lee K, Chapman MA, Abbott RJ, Coen E. Regulatory genes control a key morphological and ecological trait transferred between species. Science (New York, N.Y.). 322: 1116-9. PMID 19008450 DOI: 10.1126/Science.1164371  0.449
2008 Chapman MA, Leebens-Mack JH, Burke JM. Positive selection and expression divergence following gene duplication in the sunflower CYCLOIDEA gene family. Molecular Biology and Evolution. 25: 1260-73. PMID 18390478 DOI: 10.1093/Molbev/Msn001  0.577
2008 Baack EJ, Sapir Y, Chapman MA, Burke JM, Rieseberg LH. Selection on domestication traits and quantitative trait loci in crop-wild sunflower hybrids. Molecular Ecology. 17: 666-77. PMID 18179437 DOI: 10.1111/J.1365-294X.2007.03596.X  0.732
2007 Chapman MA, Burke JM. DNA sequence diversity and the origin of cultivated safflower (Carthamus tinctorius L.; Asteraceae). Bmc Plant Biology. 7: 60. PMID 17986334 DOI: 10.1186/1471-2229-7-60  0.579
2007 Burke JM, Burger JC, Chapman MA. Crop evolution: from genetics to genomics. Current Opinion in Genetics & Development. 17: 525-32. PMID 17933510 DOI: 10.1016/J.Gde.2007.09.003  0.774
2007 Chapman MA, Chang J, Weisman D, Kesseli RV, Burke JM. Universal markers for comparative mapping and phylogenetic analysis in the Asteraceae (Compositae). Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 115: 747-55. PMID 17634914 DOI: 10.1007/S00122-007-0605-2  0.602
2007 Chapman MA, Burke JM. Genetic divergence and hybrid speciation. Evolution; International Journal of Organic Evolution. 61: 1773-80. PMID 17598755 DOI: 10.1111/J.1558-5646.2007.00134.X  0.58
2006 Chapman MA, Burke JM. Polluting gene flow from crops: radishes gone wild. Heredity. 97: 379-80. PMID 17006535 DOI: 10.1038/Sj.Hdy.6800899  0.499
2006 Chapman MA, Burke JM. Letting the gene out of the bottle: the population genetics of genetically modified crops. The New Phytologist. 170: 429-43. PMID 16626466 DOI: 10.1111/J.1469-8137.2006.01710.X  0.643
2005 Chapman MA, Forbes DG, Abbott RJ. Pollen competition among two species of Senecio (Asteraceae) that form a hybrid zone on Mt. Etna, Sicily. American Journal of Botany. 92: 730-5. PMID 21652452 DOI: 10.3732/Ajb.92.4.730  0.404
2005 Chapman MA, Abbott RJ. The origin of a novel form of Senecio (Asteraceae) restricted to sand dunes in southern Sicily. The New Phytologist. 166: 1051-62. PMID 15869662 DOI: 10.1111/J.1469-8137.2005.01393.X  0.403
2004 Cole NJ, Hall TE, Martin CI, Chapman MA, Kobiyama A, Nihei Y, Watabe S, Johnston IA. Temperature and the expression of myogenic regulatory factors (MRFs) and myosin heavy chain isoforms during embryogenesis in the common carp Cyprinus carpio L. The Journal of Experimental Biology. 207: 4239-48. PMID 15531645 DOI: 10.1242/Jeb.01263  0.303
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