| Year |
Citation |
Score |
| 2021 |
Deaven AM, Ferreira CM, Reed EA, Chen See JR, Lee NA, Almaraz E, Rios PC, Marogi JG, Lamendella R, Zheng J, Bell RL, Shariat NW. genomics and population analyses reveal high inter- and intra- serovar diversity in freshwater. Applied and Environmental Microbiology. PMID 33397693 DOI: 10.1128/AEM.02594-20 |
0.346 |
|
| 2020 |
Emlet C, Ruffin M, Lamendella R. Enteric Virome and Carcinogenesis in the Gut. Digestive Diseases and Sciences. 65: 852-864. PMID 32060814 DOI: 10.1007/S10620-020-06126-4 |
0.315 |
|
| 2020 |
Brabec JL, Wright J, Ly T, Wong HT, McClimans CJ, Tokarev V, Lamendella R, Sherchand S, Shrestha D, Uprety S, Dangol B, Tandukar S, Sherchand JB, Sherchan SP. Arsenic disturbs the gut microbiome of individuals in a disadvantaged community in Nepal. Heliyon. 6: e03313. PMID 32051876 DOI: 10.1016/J.Heliyon.2020.E03313 |
0.448 |
|
| 2019 |
Ly T, Wright JR, Weit N, McLimans CJ, Ulrich N, Tokarev V, Valkanas MM, Trun N, Rummel S, Grant CJ, Lamendella R. Microbial Communities Associated With Passive Acidic Abandoned Coal Mine Remediation. Frontiers in Microbiology. 10: 1955. PMID 31507566 DOI: 10.3389/Fmicb.2019.01955 |
0.426 |
|
| 2019 |
Campa MF, Techtmann SM, Ladd MP, Yan J, Patterson M, Garcia de Matos Amaral A, Carter KE, Ulrich N, Grant C, Hettich RL, Lamendella R, Hazen T. Surface water microbial community response to the biocide 2-2-dibromo-3-nitrilopropionamide used in unconventional oil and gas extraction. Applied and Environmental Microbiology. PMID 31444200 DOI: 10.1128/Aem.01336-19 |
0.413 |
|
| 2019 |
Stewart D, Romo JA, Lamendella R, Kumamoto CA. The Role of Fungi in C. difficile Infection: An Underappreciated Transkingdom Interaction. Fungal Genetics and Biology : Fg & B. PMID 30978391 DOI: 10.1016/J.Fgb.2019.04.007 |
0.3 |
|
| 2019 |
Chan JP, Wright JR, Wong HT, Ardasheva A, Brumbaugh J, McLimans C, Lamendella R. Using Bacterial Transcriptomics to Investigate Targets of Host-Bacterial Interactions in Caenorhabditis elegans. Scientific Reports. 9: 5545. PMID 30944351 DOI: 10.1038/S41598-019-41452-2 |
0.363 |
|
| 2018 |
Catron TR, Keely SP, Brinkman NE, Zurlinden TJ, Wood CE, Wright JR, Phelps D, Anneken Wheaton E, Kvasnicka A, Gaballah S, Lamendella R, Tal T. Host developmental toxicity of BPA and BPA alternatives is inversely related to microbiota disruption in zebrafish. Toxicological Sciences : An Official Journal of the Society of Toxicology. PMID 30321396 DOI: 10.1093/Toxsci/Kfy261 |
0.383 |
|
| 2018 |
Thompson CP, Doak AN, Amirani N, Schroeder EA, Wright J, Kariyawasam S, Lamendella R, Shariat NW. High-resolution identification of multiple serovars in a single sample using CRISPR-SeroSeq. Applied and Environmental Microbiology. PMID 30170999 DOI: 10.1128/Aem.01859-18 |
0.428 |
|
| 2018 |
Mackelprang R, Grube AM, Lamendella R, Jesus EDC, Copeland A, Liang C, Jackson RD, Rice CW, Kapucija S, Parsa B, Tringe SG, Tiedje JM, Jansson JK. Microbial Community Structure and Functional Potential in Cultivated and Native Tallgrass Prairie Soils of the Midwestern United States. Frontiers in Microbiology. 9: 1775. PMID 30158906 DOI: 10.3389/Fmicb.2018.01775 |
0.314 |
|
| 2018 |
Chen See JR, Ulrich N, Nwanosike H, McLimans CJ, Tokarev V, Wright JR, Campa MF, Grant CJ, Hazen TC, Niles JM, Ressler D, Lamendella R. Bacterial Biomarkers of Marcellus Shale Activity in Pennsylvania. Frontiers in Microbiology. 9: 1697. PMID 30116227 DOI: 10.3389/Fmicb.2018.01697 |
0.428 |
|
| 2018 |
Dahan D, Jude BA, Lamendella R, Keesing F, Perron GG. Exposure to Arsenic Alters the Microbiome of Larval Zebrafish. Frontiers in Microbiology. 9: 1323. PMID 29977230 DOI: 10.3389/Fmicb.2018.01323 |
0.421 |
|
| 2018 |
Ulrich N, Kirchner V, Drucker R, Wright JR, McLimans CJ, Hazen TC, Campa MF, Grant CJ, Lamendella R. Response of Aquatic Bacterial Communities to Hydraulic Fracturing in Northwestern Pennsylvania: A Five-Year Study. Scientific Reports. 8: 5683. PMID 29632304 DOI: 10.1038/S41598-018-23679-7 |
0.427 |
|
| 2017 |
Wright J, Kirchner V, Bernard W, Ulrich N, McLimans C, Campa MF, Hazen T, Macbeth T, Marabello D, McDermott J, Mackelprang R, Roth K, Lamendella R. Bacterial Community Dynamics in Dichloromethane-Contaminated Groundwater Undergoing Natural Attenuation. Frontiers in Microbiology. 8: 2300. PMID 29213257 DOI: 10.3389/Fmicb.2017.02300 |
0.456 |
|
| 2017 |
Maier TV, Lucio M, Lee LH, VerBerkmoes NC, Brislawn CJ, Bernhardt J, Lamendella R, McDermott JE, Bergeron N, Heinzmann SS, Morton JT, González A, Ackermann G, Knight R, Riedel K, et al. Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome. Mbio. 8. PMID 29042495 DOI: 10.1128/Mbio.01343-17 |
0.327 |
|
| 2017 |
Schieffer KM, Sabey K, Wright JR, Toole DR, Drucker R, Tokarev V, Harris LR, Deiling S, Eshelman MA, Hegarty JP, Yochum GS, Koltun WA, Lamendella R, Stewart DB. The Microbial Ecosystem Distinguishes Chronically Diseased Tissue from Adjacent Tissue in the Sigmoid Colon of Chronic, Recurrent Diverticulitis Patients. Scientific Reports. 7: 8467. PMID 28814777 DOI: 10.1038/S41598-017-06787-8 |
0.3 |
|
| 2017 |
Toole DR, Cannon GH, Brislawn CJ, Graves JM, Lamendella R, Muth TR, Muth NZ. Differences in soil fungal assemblages associated with native and non-native tree species of varying weediness Biological Invasions. 20: 891-904. DOI: 10.1007/S10530-017-1580-4 |
0.33 |
|
| 2016 |
Bagchi S, Lamendella R, Strutt S, Van Loosdrecht MC, Saikaly PE. Metatranscriptomics reveals the molecular mechanism of large granule formation in granular anammox reactor. Scientific Reports. 6: 28327. PMID 27319320 DOI: 10.1038/Srep28327 |
0.608 |
|
| 2016 |
Sangster W, Hegarty JP, Schieffer KM, Wright JR, Hackman J, Toole DR, Lamendella R, Stewart DB. Bacterial and Fungal Microbiota Changes Distinguish C. difficile Infection from Other Forms of Diarrhea: Results of a Prospective Inpatient Study. Frontiers in Microbiology. 7: 789. PMID 27252696 DOI: 10.3389/Fmicb.2016.00789 |
0.376 |
|
| 2016 |
Ulrich N, Rosenberger A, Brislawn C, Wright J, Kessler C, Toole D, Solomon C, Strutt S, McClure E, Lamendella R. Aquatic bacterial community is restructured by hydric dynamics associated with Superstorm Sandy. Applied and Environmental Microbiology. PMID 27060115 DOI: 10.1128/Aem.00520-16 |
0.443 |
|
| 2015 |
Grant CJ, Weimer AB, Marks NK, Perow ES, Oster JM, Brubaker KM, Trexler RV, Solomon CM, Lamendella R. Marcellus and mercury: Assessing potential impacts of unconventional natural gas extraction on aquatic ecosystems in northwestern Pennsylvania. Journal of Environmental Science and Health. Part a, Toxic/Hazardous Substances & Environmental Engineering. 50: 482-500. PMID 25734824 DOI: 10.1080/10934529.2015.992670 |
0.335 |
|
| 2015 |
Bagchi S, Tellez BG, Rao HA, Lamendella R, Saikaly PE. Diversity and dynamics of dominant and rare bacterial taxa in replicate sequencing batch reactors operated under different solids retention time. Applied Microbiology and Biotechnology. 99: 2361-70. PMID 25326778 DOI: 10.1007/S00253-014-6134-4 |
0.601 |
|
| 2014 |
Trexler R, Solomon C, Brislawn CJ, Wright JR, Rosenberger A, McClure EE, Grube AM, Peterson MP, Keddache M, Mason OU, Hazen TC, Grant CJ, Lamendella R. Assessing impacts of unconventional natural gas extraction on microbial communities in headwater stream ecosystems in Northwestern Pennsylvania. Frontiers in Microbiology. 5: 522. PMID 25408683 DOI: 10.3389/Fmicb.2014.00522 |
0.421 |
|
| 2014 |
Prestat E, David MM, Hultman J, Ta? N, Lamendella R, Dvornik J, Mackelprang R, Myrold DD, Jumpponen A, Tringe SG, Holman E, Mavromatis K, Jansson JK. FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus. Nucleic Acids Research. 42: e145. PMID 25260589 DOI: 10.1093/Nar/Gku702 |
0.325 |
|
| 2014 |
Lamendella R, Strutt S, Borglin S, Chakraborty R, Tas N, Mason OU, Hultman J, Prestat E, Hazen TC, Jansson JK. Assessment of the Deepwater Horizon oil spill impact on Gulf coast microbial communities. Frontiers in Microbiology. 5: 130. PMID 24772107 DOI: 10.3389/Fmicb.2014.00130 |
0.347 |
|
| 2013 |
Lamendella R, Li KC, Oerther D, Santo Domingo JW. Molecular diversity of Bacteroidales in fecal and environmental samples and swine-associated subpopulations. Applied and Environmental Microbiology. 79: 816-24. PMID 23160126 DOI: 10.1128/Aem.02535-12 |
0.684 |
|
| 2012 |
Erickson AR, Cantarel BL, Lamendella R, Darzi Y, Mongodin EF, Pan C, Shah M, Halfvarson J, Tysk C, Henrissat B, Raes J, Verberkmoes NC, Fraser CM, Hettich RL, Jansson JK. Integrated metagenomics/metaproteomics reveals human host-microbiota signatures of Crohn's disease. Plos One. 7: e49138. PMID 23209564 DOI: 10.1371/Journal.Pone.0049138 |
0.331 |
|
| 2012 |
Mason OU, Hazen TC, Borglin S, Chain PS, Dubinsky EA, Fortney JL, Han J, Holman HY, Hultman J, Lamendella R, Mackelprang R, Malfatti S, Tom LM, Tringe SG, Woyke T, et al. Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill. The Isme Journal. 6: 1715-27. PMID 22717885 DOI: 10.1038/Ismej.2012.59 |
0.404 |
|
| 2012 |
Lamendella R, VerBerkmoes N, Jansson JK. 'Omics' of the mammalian gut--new insights into function. Current Opinion in Biotechnology. 23: 491-500. PMID 22626866 DOI: 10.1016/J.Copbio.2012.01.016 |
0.34 |
|
| 2012 |
Lu Z, Deng Y, Van Nostrand JD, He Z, Voordeckers J, Zhou A, Lee YJ, Mason OU, Dubinsky EA, Chavarria KL, Tom LM, Fortney JL, Lamendella R, Jansson JK, D'haeseleer P, et al. Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume. The Isme Journal. 6: 451-60. PMID 21814288 DOI: 10.1038/Ismej.2011.91 |
0.344 |
|
| 2011 |
Lamendella R, Domingo JW, Ghosh S, Martinson J, Oerther DB. Comparative fecal metagenomics unveils unique functional capacity of the swine gut. Bmc Microbiology. 11: 103. PMID 21575148 DOI: 10.1186/1471-2180-11-103 |
0.624 |
|
| 2010 |
Van Ginkel SW, Lamendella R, Kovacik WP, Santo Domingo JW, Rittmann BE. Microbial community structure during nitrate and perchlorate reduction in ion-exchange brine using the hydrogen-based membrane biofilm reactor (MBfR). Bioresource Technology. 101: 3747-50. PMID 20093013 DOI: 10.1016/J.Biortech.2009.12.028 |
0.408 |
|
| 2010 |
Laseke I, Korte J, Lamendella R, Kaneshiro ES, Marciano-Cabral F, Oerther DB. Identification of Naegleria fowleri in warm ground water aquifers. Journal of Environmental Quality. 39: 147-53. PMID 20048302 DOI: 10.2134/Jeq2009.0062 |
0.652 |
|
| 2010 |
Revetta RP, Pemberton A, Lamendella R, Iker B, Santo Domingo JW. Identification of bacterial populations in drinking water using 16S rRNA-based sequence analyses. Water Research. 44: 1353-60. PMID 19944442 DOI: 10.1016/J.Watres.2009.11.008 |
0.472 |
|
| 2009 |
Lamendella R, Santo Domingo JW, Yannarell AC, Ghosh S, Di Giovanni G, Mackie RI, Oerther DB. Evaluation of swine-specific PCR assays used for fecal source tracking and analysis of molecular diversity of swine-specific "bacteroidales" populations. Applied and Environmental Microbiology. 75: 5787-96. PMID 19633126 DOI: 10.1128/Aem.00448-09 |
0.676 |
|
| 2009 |
Humrighouse B, Revetta R, Lamendella R, Domingo JS, Oerther D, Rochelle P. Spatial description of drinking water bacterial community structures in bulk water samples collected in a metropolitan distribution system Water Quality Technology Conference and Exposition 2009. 1701-1712. |
0.39 |
|
| 2008 |
Lu J, Santo Domingo JW, Lamendella R, Edge T, Hill S. Phylogenetic diversity and molecular detection of bacteria in gull feces. Applied and Environmental Microbiology. 74: 3969-76. PMID 18469128 DOI: 10.1128/Aem.00019-08 |
0.48 |
|
| 2008 |
Lamendella R, Santo Domingo JW, Kelty C, Oerther DB. Bifidobacteria in feces and environmental waters. Applied and Environmental Microbiology. 74: 575-84. PMID 17993557 DOI: 10.1128/Aem.01221-07 |
0.661 |
|
| 2007 |
Vogel JR, Stoeckel DM, Lamendella R, Zelt RB, Santo Domingo JW, Walker SR, Oerther DB. Identifying fecal sources in a selected catchment reach using multiple source-tracking tools. Journal of Environmental Quality. 36: 718-29. PMID 17412907 DOI: 10.2134/Jeq2006.0246 |
0.649 |
|
| 2007 |
Lamendella R, Domingo JW, Oerther DB, Vogel JR, Stoeckel DM. Assessment of fecal pollution sources in a small northern-plains watershed using PCR and phylogenetic analyses of Bacteroidetes 16S rRNA gene. Fems Microbiology Ecology. 59: 651-60. PMID 17069624 DOI: 10.1111/J.1574-6941.2006.00211.X |
0.685 |
|
| 2007 |
Revetta RP, Santo Domingo JW, Kelty C, Humrighouse B, Oerther D, Lamendella R, Keinanen-Toivola M, Williams M. Molecular diversity of drinking water microbial communities: a phylogenetic approach Proceedings of the Water Environment Federation. 2007: 629-645. DOI: 10.2175/193864707787932739 |
0.621 |
|
| 2007 |
Santo Domingo JW, Lu J, Shanks O, Lamendella R, Kelty C, Oerther D. Development of host-specific metagenomic markers for microbial source tracking using a novel metagenomic approach Proceedings of the Water Environment Federation. 2007: 646-661. DOI: 10.2175/193864707787932496 |
0.591 |
|
| 2007 |
Humrighouse BW, Domingo JWS, Revetta RP, Lamendella R, Kelty CA, Oerther DB. Microbial characterization of drinking water systems receiving groundwater and surface water as the primary sources of water 8th Annual Water Distribution Systems Analysis Symposium 2006. 159. DOI: 10.1061/40941(247)159 |
0.651 |
|
| 2006 |
Shanks OC, Santo Domingo JW, Lamendella R, Kelty CA, Graham JE. Competitive metagenomic DNA hybridization identifies host-specific microbial genetic markers in cow fecal samples. Applied and Environmental Microbiology. 72: 4054-60. PMID 16751515 DOI: 10.1128/Aem.00023-06 |
0.405 |
|
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