Hamid R. Eghbalnia, Ph.D. - Publications

Affiliations: 
2000 University of Wisconsin, Madison, Madison, WI 
Area:
Mathematics, Computer Science

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Darbin O, Indriani DW, Ardalan A, Eghbalnia HR, Assadi A, Nambu A, Montgomery E. Spectrum dependency to Rate and Spike Timing in neuronal spike trains. Journal of Neuroscience Methods. 109532. PMID 35182602 DOI: 10.1016/j.jneumeth.2022.109532  0.503
2019 Lee W, Bahrami A, Dashti HT, Eghbalnia HR, Tonelli M, Westler WM, Markley JL. I-PINE web server: an integrative probabilistic NMR assignment system for proteins. Journal of Biomolecular Nmr. PMID 31165321 DOI: 10.1007/S10858-019-00255-3  0.365
2018 Pupier M, Nuzillard JM, Wist J, Schlörer NE, Kuhn S, Erdelyi M, Steinbeck C, Williams AJ, Butts C, Claridge TDW, Mikhova B, Robien W, Dashti H, Eghbalnia HR, Farès C, et al. NMReDATA, a standard to report the NMR assignment and parameters of organic compounds. Magnetic Resonance in Chemistry : Mrc. PMID 29656574 DOI: 10.1002/Mrc.4737  0.357
2015 Dashti H, Lee W, Tonelli M, Cornilescu CC, Cornilescu G, Assadi-Porter FM, Westler WM, Eghbalnia HR, Markley JL. NMRFAM-SDF: a protein structure determination framework. Journal of Biomolecular Nmr. PMID 25900069 DOI: 10.1007/S10858-015-9933-8  0.348
2012 Bahrami A, Tonelli M, Sahu SC, Singarapu KK, Eghbalnia HR, Markley JL. Robust, integrated computational control of NMR experiments to achieve optimal assignment by ADAPT-NMR. Plos One. 7: e33173. PMID 22427982 DOI: 10.1371/Journal.Pone.0033173  0.36
2012 Nielsen JT, Eghbalnia HR, Nielsen NC. Chemical shift prediction for protein structure calculation and quality assessment using an optimally parameterized force field. Progress in Nuclear Magnetic Resonance Spectroscopy. 60: 1-28. PMID 22293396 DOI: 10.1016/J.Pnmrs.2011.05.002  0.325
2009 Lee W, Westler WM, Bahrami A, Eghbalnia HR, Markley JL. PINE-SPARKY: graphical interface for evaluating automated probabilistic peak assignments in protein NMR spectroscopy. Bioinformatics (Oxford, England). 25: 2085-7. PMID 19497931 DOI: 10.1093/Bioinformatics/Btp345  0.315
2009 Bahrami A, Assadi AH, Markley JL, Eghbalnia HR. Probabilistic interaction network of evidence algorithm and its application to complete labeling of peak lists from protein NMR spectroscopy. Plos Computational Biology. 5: e1000307. PMID 19282963 DOI: 10.1371/Journal.Pcbi.1000307  0.587
2007 Wang L, Eghbalnia HR, Markley JL. Nearest-neighbor effects on backbone alpha and beta carbon chemical shifts in proteins. Journal of Biomolecular Nmr. 39: 247-57. PMID 17899393 DOI: 10.1007/S10858-007-9193-3  0.31
2007 Cornilescu G, Bahrami A, Tonelli M, Markley JL, Eghbalnia HR. HIFI-C: a robust and fast method for determining NMR couplings from adaptive 3D to 2D projections. Journal of Biomolecular Nmr. 38: 341-51. PMID 17610130 DOI: 10.1007/S10858-007-9173-7  0.314
2007 Assadi A, Bahrami A, Yang Y, Eghbalnia H. Patterns recognition in the ECoG data of auditory evoked response Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P132  0.569
2007 Assadi A, Bahrami A, Montgomery E, Eghbalnia H. Features of network oscillations in data from single-channel neuronal recording Bmc Neuroscience. 8. DOI: 10.1186/1471-2202-8-S2-P131  0.592
2006 Wang L, Eghbalnia HR, Markley JL. Probabilistic approach to determining unbiased random-coil carbon-13 chemical shift values from the protein chemical shift database. Journal of Biomolecular Nmr. 35: 155-65. PMID 16799859 DOI: 10.1007/S10858-006-9022-0  0.324
2005 Eghbalnia HR, Bahrami A, Tonelli M, Hallenga K, Markley JL. High-resolution iterative frequency identification for NMR as a general strategy for multidimensional data collection. Journal of the American Chemical Society. 127: 12528-36. PMID 16144400 DOI: 10.1021/Ja052120I  0.36
2005 Eghbalnia HR, Bahrami A, Wang L, Assadi A, Markley JL. Probabilistic Identification of Spin Systems and their Assignments including Coil-Helix Inference as Output (PISTACHIO). Journal of Biomolecular Nmr. 32: 219-33. PMID 16132822 DOI: 10.1007/S10858-005-7944-6  0.583
2005 Eghbalnia HR, Wang L, Bahrami A, Assadi A, Markley JL. Protein energetic conformational analysis from NMR chemical shifts (PECAN) and its use in determining secondary structural elements. Journal of Biomolecular Nmr. 32: 71-81. PMID 16041485 DOI: 10.1007/S10858-005-5705-1  0.565
2005 Assadi AH, Eghbalnia H, McMenamin BW. Information processing of motion in facial expression and the geometry of dynamical systems Proceedings of Spie - the International Society For Optical Engineering. 5675: 13-24. DOI: 10.1117/12.586073  0.551
2005 Eghbalnia HR, Assadi A, Bahrami A. A probabilistic model of coherent spatiotemporal dynamics in neuronal data 2005 Ieee Workshop On Machine Learning For Signal Processing. 381-386. DOI: 10.1109/MLSP.2005.1532933  0.54
2002 Fallahati DM, Backonja M, Eghbalnia H, Assadi AH. Dynamic PCA for network feature extraction in multi-electrode recording of neurophysiological data in cortical substrate of pain Neurocomputing. 44: 401-405. DOI: 10.1016/S0925-2312(02)00389-2  0.579
2001 Eghbalnia H, Assadi A. An application of support vector machines and symmetry to computational modeling of perception through visual attention Neurocomputing. 38: 1193-1201. DOI: 10.1016/S0925-2312(01)00569-0  0.526
2001 Assadi A, Eghbalnia H. Recurrent probabilistic dynamics: Applications to face recognition Neurocomputing. 38: 1067-1075. DOI: 10.1016/S0925-2312(01)00418-0  0.579
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