John R. Krieger, Ph.D. - Publications

2000 University of Iowa, Iowa City, IA 
Civil Engineering, Atmospheric Science Physics

42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Ho JJD, Cunningham TA, Manara P, Coughlin CA, Arumov A, Roberts ER, Osteen A, Kumar P, Bilbao D, Krieger JR, Lee S, Schatz JH. Proteomics reveal cap-dependent translation inhibitors remodel the translation machinery and translatome. Cell Reports. 37: 109806. PMID 34644561 DOI: 10.1016/j.celrep.2021.109806  1
2021 Goodyear MC, Garnier N, Krieger JR, Geddes-McAlister J, Khursigara CM. Label-free quantitative proteomics identifies unique proteomes of clinical isolates of the Liverpool Epidemic Strain of Pseudomonas aeruginosa and laboratory strain PAO1. Proteomics. Clinical Applications. e2100062. PMID 34510773 DOI: 10.1002/prca.202100062  1
2020 Balukoff NC, Ho JJD, Theodoridis PR, Wang M, Bokros M, Llanio LM, Krieger JR, Schatz JH, Lee S. A translational program that suppresses metabolism to shield the genome. Nature Communications. 11: 5755. PMID 33188200 DOI: 10.1038/s41467-020-19602-2  1
2020 Tong J, Krieger JR, Taylor P, Bagshaw R, Kang J, Jeedigunta S, Wybenga-Groot LE, Zhang W, Badr H, Mirhadi S, Pham NA, Coyaud É, Yu M, Li M, Cabanero M, et al. Cancer proteome and metabolite changes linked to SHMT2. Plos One. 15: e0237981. PMID 32903271 DOI: 10.1371/Journal.Pone.0237981  1
2020 Ho JJD, Balukoff NC, Theodoridis PR, Wang M, Krieger JR, Schatz JH, Lee S. A network of RNA-binding proteins controls translation efficiency to activate anaerobic metabolism. Nature Communications. 11: 2677. PMID 32472050 DOI: 10.1038/S41467-020-16504-1  1
2019 Krieger JR, Wybenga-Groot LE, Tong J, Bache N, Tsao MS, Moran MF. Evosep One enables robust deep proteome coverage using tandem mass tags while significantly reducing instrument time. Journal of Proteome Research. PMID 30938160 DOI: 10.1021/acs.jproteome.9b00082  1
2019 Teyra J, Singer AU, Schmitges FW, Jaynes P, Kit Leng Lui S, Polyak MJ, Fodil N, Krieger JR, Tong J, Schwerdtfeger C, Brasher BB, Ceccarelli DFJ, Moffat J, Sicheri F, Moran MF, et al. Structural and Functional Characterization of Ubiquitin Variant Inhibitors of USP15. Structure (London, England : 1993). PMID 30713027 DOI: 10.1016/J.Str.2019.01.002  1
2018 Gill MK, Christova T, Zhang YY, Gregorieff A, Zhang L, Narimatsu M, Song S, Xiong S, Couzens AL, Tong J, Krieger JR, Moran MF, Zlotta AR, van der Kwast TH, Gingras AC, et al. A feed forward loop enforces YAP/TAZ signaling during tumorigenesis. Nature Communications. 9: 3510. PMID 30158528 DOI: 10.1038/S41467-018-05939-2  1
2018 Berezuk AM, Glavota S, Roach EJ, Goodyear MC, Krieger JR, Khursigara CM. Outer membrane lipoprotein RlpA is a novel periplasmic interaction partner of the cell division protein FtsK in Escherichia coli. Scientific Reports. 8: 12933. PMID 30154462 DOI: 10.1038/s41598-018-30979-5  1
2018 Ho JJD, Balukoff NC, Cervantes G, Malcolm PD, Krieger JR, Lee S. Oxygen-Sensitive Remodeling of Central Carbon Metabolism by Archaic eIF5B. Cell Reports. 22: 17-26. PMID 29298419 DOI: 10.1016/J.Celrep.2017.12.031  1
2017 Xie JL, Qin L, Miao Z, Grys BT, Diaz JC, Ting K, Krieger JR, Tong J, Tan K, Leach MD, Ketela T, Moran MF, Krysan DJ, Boone C, Andrews BJ, et al. The Candida albicans transcription factor Cas5 couples stress responses, drug resistance and cell cycle regulation. Nature Communications. 8: 499. PMID 28894103 DOI: 10.1038/S41467-017-00547-Y  1
2017 Pal S, Lant B, Yu B, Tian R, Tong J, Krieger JR, Moran MF, Gingras AC, Derry WB. CCM-3 Promotes C. elegans Germline Development by Regulating Vesicle Trafficking Cytokinesis and Polarity. Current Biology : Cb. PMID 28285997 DOI: 10.1016/J.Cub.2017.02.028  1
2016 Tong J, Cao B, Martyn GD, Krieger JR, Taylor P, Yates B, Sidhu SS, Li SS, Mao X, Moran MF. Protein-phosphotyrosine proteome profiling by superbinder-SH2 domain affinity purification mass spectrometry, sSH2-AP-MS. Proteomics. PMID 27880036 DOI: 10.1002/pmic.201600360  1
2016 Matsumoto Y, La Rose J, Kent OA, Wagner MJ, Narimatsu M, Levy AD, Omar MH, Tong J, Krieger JR, Riggs E, Storozhuk Y, Pasquale J, Ventura M, Yeganeh B, Post M, et al. Reciprocal stabilization of ABL and TAZ regulates osteoblastogenesis through transcription factor RUNX2. The Journal of Clinical Investigation. PMID 27797343 DOI: 10.1172/Jci87802  1
2016 Agnihotri S, Jalali S, Wilson MR, Danesh A, Li M, Klironomos G, Krieger JR, Mansouri A, Khan O, Mamatjan Y, Landon-Brace N, Tung T, Dowar M, Li T, Bruce JP, et al. The genomic landscape of schwannoma. Nature Genetics. PMID 27723760 DOI: 10.1038/Ng.3688  1
2016 Okura H, Golbourn BJ, Shahzad U, Agnihotri S, Sabha N, Krieger JR, Figueiredo CA, Chalil A, Landon-Brace N, Riemenschneider A, Arai H, Smith CA, Xu S, Kaluz S, Marcus AI, et al. A role for activated Cdc42 in glioblastoma multiforme invasion. Oncotarget. PMID 27486972 DOI: 10.18632/Oncotarget.10925  1
2016 Chan T, Hawkins C, Krieger JR, McGlade CJ, Huang A. JPO2/CDCA7L and LEDGF/p75 are novel mediators of PI3K/AKT signalling and aggressive phenotypes in medulloblastoma. Cancer Research. PMID 27013196 DOI: 10.1158/0008-5472.CAN-15-2194  1
2016 Ho JJ, Wang M, Audas TE, Kwon D, Carlsson SK, Timpano S, Evagelou SL, Brothers S, Gonzalgo ML, Krieger JR, Chen S, Uniacke J, Lee S. Systemic Reprogramming of Translation Efficiencies on Oxygen Stimulus. Cell Reports. PMID 26854219 DOI: 10.1016/J.Celrep.2016.01.036  1
2016 Park AJ, Krieger JR, Khursigara CM. Survival proteomes: the emerging proteotype of antimicrobial resistance. Fems Microbiology Reviews. PMID 26790948 DOI: 10.1093/femsre/fuv051  1
2016 Bieniek PA, Bhatt US, Walsh JE, Rupp TS, Zhang J, Krieger JR, Lader R. Full access dynamical downscaling of ERA-interim temperature and precipitation for Alaska Journal of Applied Meteorology and Climatology. 55: 635-654. DOI: 10.1175/Jamc-D-15-0153.1  1
2015 Krieger JR, Ogle ME, McFaline-Figueroa J, Segar CE, Temenoff JS, Botchwey EA. Spatially localized recruitment of anti-inflammatory monocytes by SDF-1α-releasing hydrogels enhances microvascular network remodeling. Biomaterials. 77: 280-290. PMID 26613543 DOI: 10.1016/J.Biomaterials.2015.10.045  1
2015 Park AJ, Murphy K, Surette MD, Bandoro C, Krieger JR, Taylor P, Khursigara CM. Tracking the Dynamic Relationship between Cellular Systems and Extracellular Subproteomes in Pseudomonas aeruginosa Biofilms. Journal of Proteome Research. PMID 26378716 DOI: 10.1021/acs.jproteome.5b00262  1
2015 Wei Y, Vellanki RN, Coyaud É, Ignatchenko V, Li L, Krieger JR, Taylor P, Tong J, Pham NA, Liu G, Raught B, Wouters BG, Kislinger T, Tsao MS, Moran MF. CHCHD2 Is Coamplified with EGFR in NSCLC and Regulates Mitochondrial Function and Cell Migration. Molecular Cancer Research : McR. 13: 1119-29. PMID 25784717 DOI: 10.1158/1541-7786.Mcr-14-0165-T  1
2015 Krieger JR, Taylor P, Moran MF, McGlade CJ. Comprehensive identification of phosphorylation sites on the Numb endocytic adaptor protein. Proteomics. 15: 434-46. PMID 25403733 DOI: 10.1002/pmic.201400232  1
2014 Park AJ, Murphy K, Krieger JR, Brewer D, Taylor P, Habash M, Khursigara CM. A temporal examination of the planktonic and biofilm proteome of whole cell Pseudomonas aeruginosa PAO1 using quantitative mass spectrometry. Molecular & Cellular Proteomics : McP. 13: 1095-105. PMID 24532839 DOI: 10.1074/mcp.M113.033985  1
2014 Avitzur Y, Guo C, Mastropaolo LA, Bahrami E, Chen H, Zhao Z, Elkadri A, Dhillon S, Murchie R, Fattouh R, Huynh H, Walker JL, Wales PW, Cutz E, Kakuta Y, ... Krieger JR, et al. Mutations in tetratricopeptide repeat domain 7A result in a severe form of very early onset inflammatory bowel disease. Gastroenterology. 146: 1028-39. PMID 24417819 DOI: 10.1053/J.Gastro.2014.01.015  1
2014 Shulski MD, You J, Krieger JR, Baule W, Zhang J, Zhang X, Horowitz W. Quality assessment of meteorological data for the Beaufort and Chukchi sea coastal region using automated routines Arctic. 67: 104-112. DOI: 10.14430/Arctic4367  1
2014 Liu F, Krieger JR, Zhang J. Toward producing the chukchi-beaufort high-resolution atmospheric reanalysis (CBHAR) via the WRFDA data assimilation system Monthly Weather Review. 142: 788-805. DOI: 10.1175/MWR-D-13-00063.1  1
2013 Krieger JR, Taylor P, Gajadhar AS, Guha A, Moran MF, McGlade CJ. Identification and selected reaction monitoring (SRM) quantification of endocytosis factors associated with Numb. Molecular & Cellular Proteomics : McP. 12: 499-514. PMID 23211419 DOI: 10.1074/mcp.M112.020768  1
2013 Hyndman BD, Gujral TS, Krieger JR, Cockburn JG, Mulligan LM. Multiple functional effects of RET kinase domain sequence variants in Hirschsprung disease. Human Mutation. 34: 132-42. PMID 22837065 DOI: 10.1002/humu.22170  1
2013 Dammann DO, Bhatt US, Langen PL, Krieger JR, Zhang X. Impact of daily arctic sea ice variability in CAM3.0 during fall and winter Journal of Climate. 26: 1939-1955. DOI: 10.1175/Jcli-D-11-00710.1  1
2013 Krieger JR, Chadwick NE. Recreational diving impacts and the use of pre-dive briefings as a management strategy on Florida coral reefs Journal of Coastal Conservation. 17: 179-189. DOI: 10.1007/S11852-012-0229-9  1
2013 Fan X, Krieger JR, Zhang J, Zhang X. Assimilating QuikSCAT Ocean Surface Winds with the Weather Research and Forecasting Model for Surface Wind-Field Simulation over the Chukchi/Beaufort Seas Boundary-Layer Meteorology. 148: 207-226. DOI: 10.1007/s10546-013-9805-2  1
2012 Krieger JR, Kourtev PS. Detection of methanogenic archaea in the pitchers of the Northern pitcher plant (Sarracenia purpurea ). Canadian Journal of Microbiology. 58: 189-94. PMID 22263906 DOI: 10.1139/W11-117  1
2012 Krieger JR, Kourtev PS. Bacterial diversity in three distinct sub-habitats within the pitchers of the northern pitcher plant, Sarracenia purpurea. Fems Microbiology Ecology. 79: 555-67. PMID 22092381 DOI: 10.1111/J.1574-6941.2011.01240.X  1
2008 Ndiaye K, Krieger JR, Warren JR, Hecht ML, Okuyemi K. Health Disparities and Discrimination: Three Perspectives. Journal of Health Disparities Research and Practice. 2: 51-71. PMID 20694161 DOI: 10.1901/jaba.2008.2-51  0.01
2008 Fan X, Walsh JE, Krieger JR. A one-year experimental Arctic reanalysis and comparisons with ERA-40 and NCEP/NCAR reanalyses Geophysical Research Letters. 35. DOI: 10.1029/2008GL035110  1
2005 Krieger JR, Chahine GL. Acoustic signals of underwater explosions near surfaces Journal of the Acoustical Society of America. 118: 2961-2974. DOI: 10.1121/1.2047147  1
2005 Fan X, Krieger JR, Meng X, Smith RW, Walsh JE. Assimilation of MODIS retrievals with the MM5/3DVAR system in an Arctic extreme rain event 85th Ams Annual Meeting, American Meteorological Society - Combined Preprints. 4221-4226.  1
2005 Krieger JR, Zhang J. Numerical simulation of different complex terrain flows in South-Central Alaska: Implication for air pollution transport 85th Ams Annual Meeting, American Meteorological Society - Combined Preprints. 4227-4233.  1
2004 Parrott R, Silk K, Krieger JR, Harris T, Condit C. Behavioral Health Outcomes Associated with Religious Faith and Media Exposure about Human Genetics Health Communication. 16: 29-45. PMID 14979850 DOI: 10.1207/S15327027Hc1601_3  1
1997 Krieger JR, Chen LD. Measurements of heat transfer to near-critical fluids 33rd Joint Propulsion Conference and Exhibit 1
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