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Aihua Xie - Publications

Affiliations: 
Physics Oklahoma State University, Stillwater, OK, United States 
Area:
General Biophysics, Biochemistry
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Mix LT, Hara M, Fuzell J, Kumauchi M, Kaledhonkar S, Xie A, Hoff WD, Larsen DS. Not All Photoactive Yellow Proteins Are Built Alike: Surprises and Insights into Chromophore Photoisomerization, Protonation, and Thermal Reisomerization of the Photoactive Yellow Protein Isolated from . Journal of the American Chemical Society. 143: 19614-19628. PMID 34780163 DOI: 10.1021/jacs.1c08910  0.727
2018 Kottke T, Xie A, Larsen DS, Hoff WD. Photoreceptors Take Charge: Emerging Principles for Light Sensing. Annual Review of Biophysics. PMID 29539272 DOI: 10.1146/Annurev-Biophys-070317-033047  0.474
2017 Xie A, Liu C, Cavener M. Infrared Structural Biology: How to Detect Protonation States of Histidine Side Chains in Proteins Biophysical Journal. 112. DOI: 10.1016/J.Bpj.2016.11.401  0.405
2016 Xie A, Balch M, Neto D, Causey O, Hendriks J, Deng J, Matts R. FTIR Study Reveal Intrinsically Disordered Nature of Heat Shock Protein 90 Biophysical Journal. 110: 37a. DOI: 10.1016/J.Bpj.2015.11.267  0.374
2015 Xie A, Redlich B, Meer LVD, Vyawahare S, Austin RH. Hidden harmonic quantum states in proteins: Did Davydov get the sign wrong? Physica Scripta. 2015. DOI: 10.1088/0031-8949/2015/T165/014042  0.378
2013 Kaledhonkar S, Hara M, Stalcup TP, Xie A, Hoff WD. Strong ionic hydrogen bonding causes a spectral isotope effect in photoactive yellow protein. Biophysical Journal. 105: 2577-85. PMID 24314088 DOI: 10.1016/J.Bpj.2013.10.017  0.706
2012 Rathod R, Kang Z, Hartson SD, Kumauchi M, Xie A, Hoff WD. Side-chain specific isotopic labeling of proteins for infrared structural biology: the case of ring-D4-tyrosine isotope labeling of photoactive yellow protein. Protein Expression and Purification. 85: 125-32. PMID 22800658 DOI: 10.1016/J.Pep.2012.06.011  0.577
2010 Kumauchi M, Kaledhonkar S, Philip AF, Wycoff J, Hara M, Li Y, Xie A, Hoff WD. A conserved helical capping hydrogen bond in PAS domains controls signaling kinetics in the superfamily prototype photoactive yellow protein. Journal of the American Chemical Society. 132: 15820-30. PMID 20954744 DOI: 10.1021/Ja107716R  0.73
2010 Hoff WD, Kang Z, Kumauchi M, Xie A. Changes in Active Site Hydrogen Bonding upon Formation of the Electronically Excited State of Photoactive Yellow Protein Hydrogen Bonding and Transfer in the Excited State. 2: 839-855. DOI: 10.1002/9780470669143.ch37  0.368
2009 Van Der Horst MA, Stalcup TP, Kaledhonkar S, Kumauchi M, Hara M, Xie A, Hellingwerf KJ, Hoff WD. Locked chromophore analogs reveal that photoactive yellow protein regulates biofilm formation in the deep sea bacterium Idiomarina loihiensis Journal of the American Chemical Society. 131: 17443-17451. PMID 19891493 DOI: 10.1021/Ja9057103  0.714
2009 Austin RH, Xie A, Fu D, Warren WW, Redlich B, van der Meer L. Tilting after Dutch windmills: probably no long-lived Davydov solitons in proteins. Journal of Biological Physics. 35: 91-101. PMID 19669571 DOI: 10.1007/S10867-009-9130-7  0.344
2009 Kaledhonkar S, Kelemen L, Thubagere A, Li Y, Xie A. Impact of Hofmeister Salts on Structural Dynamics of Photoactive Yellow Protein Biophysical Journal. 96: 73a. DOI: 10.1016/J.Bpj.2008.12.278  0.726
2009 Xie A, Li Y, Manda E, Nie B, Hoff WD, Martin RL. Mechanism of Internal Proton Transfer Reactions in Proteins Biophysical Journal. 96: 240a. DOI: 10.1016/J.Bpj.2008.12.1180  0.603
2008 Kumauchi M, Hara MT, Stalcup P, Xie A, Hoff WD. Identification of six new photoactive yellow proteins--diversity and structure-function relationships in a bacterial blue light photoreceptor. Photochemistry and Photobiology. 84: 956-69. PMID 18399917 DOI: 10.1111/J.1751-1097.2008.00335.X  0.426
2008 Singhal K, Bhatt K, Kang Z, Hoff W, Xie A, Kalkan AK. Structural Dynamics of a Single Photoreceptor Protein Molecule Monitored With Surface-Enhanced Raman Scattering Substrates Mrs Proceedings. 1077. DOI: 10.1557/Proc-1077-L10-04  0.551
2005 Austin RH, Xie A, van der Meer L, Redlich B, Lindgård PA, Frauenfelder H, Fu D. Picosecond thermometer in the amide I band of myoglobin. Physical Review Letters. 94: 128101. PMID 15903964 DOI: 10.1103/Physrevlett.94.128101  0.312
2005 Nie B, Stutzman J, Xie A. A vibrational spectral maker for probing the hydrogen-bonding status of protonated Asp and Glu residues. Biophysical Journal. 88: 2833-47. PMID 15653739 DOI: 10.1529/Biophysj.104.047639  0.604
2002 Xie A, van der Meer L, Austin RH. Excited-state lifetimes of far-infrared collective modes in proteins. Journal of Biological Physics. 28: 147-54. PMID 23345764 DOI: 10.1023/A:1019986321524  0.36
2002 Xie A, van der Meer AF, Austin RH. Excited-state lifetimes of far-infrared collective modes in proteins. Physical Review Letters. 88: 018102. PMID 11800992 DOI: 10.1103/Physrevlett.88.018102  0.366
2001 Xie A, Kelemen L, Hendriks J, White BJ, Hellingwerf KJ, Hoff WD. Formation of a new buried charge drives a large-amplitude protein quake in photoreceptor activation. Biochemistry. 40: 1510-7. PMID 11327809 DOI: 10.1021/Bi002449A  0.487
2000 Xie A, van Der Meer L, Hoff W, Austin RH. Long-lived amide I vibrational modes in myoglobin. Physical Review Letters. 84: 5435-8. PMID 10990962 DOI: 10.1103/Physrevlett.84.5435  0.391
1999 Hoff WD, Xie A, Van Stokkum IHM, Tang Xj, Gural J, Kroon AR, Hellingwerf KJ. Global conformational changes upon receptor stimulation in photoactive yellow protein Biochemistry. 38: 1009-1017. PMID 9893997 DOI: 10.1021/Bi980504Y  0.466
1996 Xie A, Hoff WD, Kroon AR, Hellingwerf KJ. Glu46 donates a proton to the 4-hydroxycinnamate anion chromophore during the photocycle of photoactive yellow protein Biochemistry. 35: 14671-14678. PMID 8942626 DOI: 10.1021/Bi9623035  0.486
1990 Frauenfelder H, Alberding NA, Ansari A, Braunstein D, Cowen BR, Hong MK, Iben IET, Johnson JB, Luck S, Marden MC, Mourant JR, Ormos P, Reinisch L, Scholl R, Schulte A, ... ... Xie A, et al. Proteins and pressure Journal of Physical Chemistry. 94: 1024-1037. DOI: 10.1021/J100366A002  0.318
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