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Tae H. Hwang, Ph.D. - Publications

Affiliations: 
2011 Computer Science University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
Computer Science, Bioinformatics Biology
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27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Wang SC, Yeu Y, Hammer STG, Xiao S, Zhu M, Hong C, Clemenceau JR, Yoon LY, Nassour I, Shen J, Agarwal D, Reznik SI, Mansour JC, Yopp AC, Zhu H, ... Hwang TH, et al. Hispanic/Latino gastric adenocarcinoma patients have distinct molecular profiles including a high rate of germline CDH1 mutations. Cancer Research. PMID 32269045 DOI: 10.1158/0008-5472.Can-19-2918  0.333
2020 Li Y, Yang R, Henzler CM, Ho Y, Passow C, Auch B, Carreira S, Nava Rodrigues D, Bertan C, Hwang TH, Quigley DA, Dang HX, Morrissey C, Fraser M, Plymate SR, et al. Diverse AR Gene Rearrangements Mediate Resistance to Androgen Receptor Inhibitors in Metastatic Prostate Cancer. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 31932493 DOI: 10.1158/1078-0432.Ccr-19-3023  0.305
2020 Clemenceau JR, Lee SH, Milinovich A, Jin J, Pennell N, Sohal D, Hwang TH. Abstract 3638: Analysis of the clinical benefit of comprehensive genome profiling derived therapeutic associations in advanced cancer Cancer Research. 80: 3638-3638. DOI: 10.1158/1538-7445.Am2020-3638  0.318
2020 Park S, Cheong J, Wang SC, Hong C, Porembka M, Hwang TH. Abstract 3094: Development of a prognostic and predictive 32 gene signature for gastric cancer Clinical Trials. DOI: 10.1158/1538-7445.Am2020-3094  0.307
2019 Xu H, Park S, Hwang TH. Computerized Classification of Prostate Cancer Gleason Scores from Whole Slide Images. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 31536012 DOI: 10.1109/Tcbb.2019.2941195  0.304
2018 McMillan EA, Ryu MJ, Diep CH, Mendiratta S, Clemenceau JR, Vaden RM, Kim JH, Motoyaji T, Covington KR, Peyton M, Huffman K, Wu X, Girard L, Sung Y, Chen PH, ... ... Hwang TH, et al. Chemistry-First Approach for Nomination of Personalized Treatment in Lung Cancer. Cell. PMID 29681454 DOI: 10.1016/J.Cell.2018.03.028  0.312
2017 Sun X, Wang SC, Wei Y, Luo X, Jia Y, Li L, Gopal P, Zhu M, Nassour I, Chuang JC, Maples T, Celen C, Nguyen LH, Wu L, Fu S, ... ... Hwang TH, et al. Arid1a Has Context-Dependent Oncogenic and Tumor Suppressor Functions in Liver Cancer. Cancer Cell. 32: 574-589.e6. PMID 29136504 DOI: 10.1016/J.Ccell.2017.10.007  0.303
2017 Landman SR, Hwang TH. Bioinformatics Data Analysis of Next-Generation Sequencing Data from Heterogeneous Tumor Samples. Methods in Molecular Biology (Clifton, N.J.). 1633: 185-192. PMID 28735488 DOI: 10.1007/978-1-4939-7142-8_12  0.317
2017 Tagal V, Wei S, Zhang W, Brekken RA, Posner BA, Peyton M, Girard L, Hwang T, Wheeler DA, Minna JD, White MA, Gazdar AF, Roth MG. SMARCA4-inactivating mutations increase sensitivity to Aurora kinase A inhibitor VX-680 in non-small cell lung cancers. Nature Communications. 8: 14098. PMID 28102363 DOI: 10.1038/Ncomms14098  0.311
2016 Petegrosso R, Park S, Hwang TH, Kuang R. Transfer Learning across Ontologies for Phenome-Genome Association Prediction. Bioinformatics (Oxford, England). PMID 27797759 DOI: 10.1093/Bioinformatics/Btw649  0.576
2016 Porembka M, Cheong J, Wang S, Park S, Christie A, Choti MA, Zhu H, Kim HK, Hyung WJ, Noh SH, Hwang TH. A 30 gene panel as prognostic for survival outcomes in clinically resectable gastric cancer. Journal of Clinical Oncology. 34: 4039-4039. DOI: 10.1200/Jco.2016.34.15_Suppl.4039  0.325
2015 Guo Y, Updegraff BL, Park S, Durakoglugil D, Burton V, Maddux S, Hwang TH, O'Donnell KA. Comprehensive ex vivo transposon mutagenesis identifies genes that promote growth factor independence and leukemogenesis. Cancer Research. PMID 26676752 DOI: 10.1158/0008-5472.Can-15-1697  0.349
2015 Park S, Kim SJ, Yu D, Pena-Llopis S, Gao J, Park JS, Chen B, Norris J, Wang X, Chen M, Kim M, Yong J, Wardak Z, Choe K, Story M, ... ... Hwang TH, et al. An integrative somatic mutation analysis to identify pathways linked with survival outcomes across 19 cancer types. Bioinformatics (Oxford, England). PMID 26635139 DOI: 10.1093/Bioinformatics/Btv692  0.357
2015 Chang JW, Zhang W, Yeh HS, de Jong EP, Jun S, Kim KH, Bae SS, Beckman K, Hwang TH, Kim KS, Kim DH, Griffin TJ, Kuang R, Yong J. mRNA 3'-UTR shortening is a molecular signature of mTORC1 activation. Nature Communications. 6: 7218. PMID 26074333 DOI: 10.1038/Ncomms8218  0.507
2015 Xie M, Xu Y, Zhang Y, Hwang T, Kuang R. Network-based Phenome-Genome Association Prediction by Bi-Random Walk. Plos One. 10: e0125138. PMID 25933025 DOI: 10.1371/Journal.Pone.0125138  0.574
2014 Cheong J, Park SH, Park ES, Kim HK, Pak KH, Noh SH, Hwang TH. Abstract LB-321: An integrated somatic mutation-miRNA-transcriptome network analysis identifies prognostic subgroups in advanced gastric cancer Cancer Research. 74. DOI: 10.1158/1538-7445.Am2014-Lb-321  0.366
2014 Heo SJ, Kim JW, Kwon WS, Kim HK, Hong MH, Yang WI, Kim S, Kim HS, Chung HC, Hwang TH, Rha SY. Abstract 3421: Serial whole exome sequencing showed the genetic aggravation of refractory osteosarcoma Cancer Research. 74: 3421-3421. DOI: 10.1158/1538-7445.Am2014-3421  0.349
2013 Yu D, Kim M, Xiao G, Hwang TH. Review of biological network data and its applications. Genomics & Informatics. 11: 200-10. PMID 24465231 DOI: 10.5808/Gi.2013.11.4.200  0.341
2013 Nyquist MD, Li Y, Hwang TH, Manlove LS, Vessella RL, Silverstein KA, Voytas DF, Dehm SM. TALEN-engineered AR gene rearrangements reveal endocrine uncoupling of androgen receptor in prostate cancer. Proceedings of the National Academy of Sciences of the United States of America. 110: 17492-7. PMID 24101480 DOI: 10.1073/Pnas.1308587110  0.313
2013 Hwang TH, Atluri G, Kuang R, Kumar V, Starr T, Silverstein KA, Haverty PM, Zhang Z, Liu J. Large-scale integrative network-based analysis identifies common pathways disrupted by copy number alterations across cancers. Bmc Genomics. 14: 440. PMID 23822816 DOI: 10.1186/1471-2164-14-440  0.571
2012 Hwang T, Atluri G, Xie M, Dey S, Hong C, Kumar V, Kuang R. Co-clustering phenome-genome for phenotype classification and disease gene discovery. Nucleic Acids Research. 40: e146. PMID 22735708 DOI: 10.1093/Nar/Gks615  0.584
2012 Xie M, Hwang TH, Kuang R. Erratum: Reconstructing Disease Phenome-genome Association by Bi-Random Walk (Bioinformatics (2012)) Bioinformatics. 30. PMID 22302570 DOI: 10.1093/Bioinformatics/Bts067  0.524
2012 Li Y, Hwang TH, Oseth LA, Hauge A, Vessella RL, Schmechel SC, Hirsch B, Beckman KB, Silverstein KA, Dehm SM. AR intragenic deletions linked to androgen receptor splice variant expression and activity in models of prostate cancer progression. Oncogene. 31: 4759-67. PMID 22266865 DOI: 10.1038/Onc.2011.637  0.324
2011 Hwang T, Zhang W, Xie M, Liu J, Kuang R. Inferring disease and gene set associations with rank coherence in networks. Bioinformatics (Oxford, England). 27: 2692-9. PMID 21824970 DOI: 10.1093/Bioinformatics/Btr463  0.588
2009 Tian Z, Hwang T, Kuang R. A hypergraph-based learning algorithm for classifying gene expression and arrayCGH data with prior knowledge. Bioinformatics (Oxford, England). 25: 2831-8. PMID 19648139 DOI: 10.1093/Bioinformatics/Btp467  0.643
2008 Hwang T, Sicotte H, Tian Z, Wu B, Kocher JP, Wigle DA, Kumar V, Kuang R. Robust and efficient identification of biomarkers by classifying features on graphs. Bioinformatics (Oxford, England). 24: 2023-9. PMID 18653521 DOI: 10.1093/Bioinformatics/Btn383  0.622
2005 Kwon HC, Moon CH, Kim SH, Choi HJ, Lee HS, Roh MS, Hwang TH, Kim JS, Kim HJ. Expression of double-stranded RNA-activated Protein kinase (PKR) and its prognostic significance in lymph node negative rectal cancer Japanese Journal of Clinical Oncology. 35: 545-550. PMID 16148023 DOI: 10.1200/Jco.2005.23.16_Suppl.3545  0.303
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