Eldon G. Emberly, Ph.D. - Publications

Affiliations: 
2000 Simon Fraser University, Burnaby, British Columbia, Canada 
Area:
Condensed Matter Physics

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Farré P, Jones MJ, Meaney MJ, Emberly E, Turecki G, Kobor MS. Concordant and discordant DNA methylation signatures of aging in human blood and brain. Epigenetics & Chromatin. 8: 19. PMID 25977707 DOI: 10.1186/S13072-015-0011-Y  1
2013 Jones MJ, Farré P, McEwen LM, Macisaac JL, Watt K, Neumann SM, Emberly E, Cynader MS, Virji-Babul N, Kobor MS. Distinct DNA methylation patterns of cognitive impairment and trisomy 21 in Down syndrome. Bmc Medical Genomics. 6: 58. PMID 24373378 DOI: 10.1186/1755-8794-6-58  1
2013 Hamidi M, Emberly E. A model for cell population size control using asymmetric division. Plos One. 8: e74324. PMID 24040230 DOI: 10.1371/Journal.Pone.0074324  1
2013 Ricicova M, Hamidi M, Quiring A, Niemistö A, Emberly E, Hansen CL. Dissecting genealogy and cell cycle as sources of cell-to-cell variability in MAPK signaling using high-throughput lineage tracking. Proceedings of the National Academy of Sciences of the United States of America. 110: 11403-8. PMID 23803859 DOI: 10.1073/Pnas.1215850110  1
2013 Caracheo BF, Emberly E, Hadizadeh S, Hyman JM, Seamans JK. Abrupt changes in the patterns and complexity of anterior cingulate cortex activity when food is introduced into an environment. Frontiers in Neuroscience. 7: 74. PMID 23745102 DOI: 10.3389/Fnins.2013.00074  1
2013 Lam LL, Emberly E, Fraser HB, Neumann SM, Chen E, Miller GE, Kobor MS. Reply to Suderman et al.: Importance of accounting for blood cell composition in epigenetic studies. Proceedings of the National Academy of Sciences of the United States of America. 110: E1247. PMID 23667927 DOI: 10.1073/Pnas.1222104110  1
2013 Price ME, Cotton AM, Lam LL, Farré P, Emberly E, Brown CJ, Robinson WP, Kobor MS. Additional annotation enhances potential for biologically-relevant analysis of the Illumina Infinium HumanMethylation450 BeadChip array. Epigenetics & Chromatin. 6: 4. PMID 23452981 DOI: 10.1186/1756-8935-6-4  1
2013 Hyman JM, Whitman J, Emberly E, Woodward TS, Seamans JK. Action and outcome activity state patterns in the anterior cingulate cortex. Cerebral Cortex (New York, N.Y. : 1991). 23: 1257-68. PMID 22617853 DOI: 10.1093/Cercor/Bhs104  1
2012 Lam LL, Emberly E, Fraser HB, Neumann SM, Chen E, Miller GE, Kobor MS. Factors underlying variable DNA methylation in a human community cohort. Proceedings of the National Academy of Sciences of the United States of America. 109: 17253-60. PMID 23045638 DOI: 10.1073/Pnas.1121249109  1
2012 Modaber SS, Emberly E. Self-Organized Protein Localization and DNA Segregation Inside Bacterial Cells Biophysical Journal. 102. DOI: 10.1016/J.Bpj.2011.11.290  0.68
2011 Schulze JM, Hentrich T, Nakanishi S, Gupta A, Emberly E, Shilatifard A, Kobor MS. Splitting the task: Ubp8 and Ubp10 deubiquitinate different cellular pools of H2BK123. Genes & Development. 25: 2242-7. PMID 22056669 DOI: 10.1101/Gad.177220.111  1
2011 Sadeghi S, Emberly E. Sequence Dependence of Coiled-Coil Formation and Stability Studied Using a Coarse-Grained Atomistic Model Biophysical Journal. 100. DOI: 10.1016/J.Bpj.2010.12.465  0.68
2010 Sadeghi S, Emberly E. Length Dependent Force Characteristics of Coiled-Coils Biophysical Journal. 98: 4-4. DOI: 10.1016/J.Bpj.2009.12.2467  0.68
2009 Sadeghi S, Emberly E. Length-dependent force characteristics of coiled coils. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 80: 061909. PMID 20365192 DOI: 10.1103/Physreve.80.061909  1
2009 Jiang N, Emberly E, Cuvier O, Hart CM. Genome-wide mapping of boundary element-associated factor (BEAF) binding sites in Drosophila melanogaster links BEAF to transcription. Molecular and Cellular Biology. 29: 3556-68. PMID 19380483 DOI: 10.1128/Mcb.01748-08  1
2009 Sadeghi S, Emberly E. The Dependence Of Coiled-coil Chirality On Elastic Energy Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.239  0.68
2008 Emberly E, Blattes R, Schuettengruber B, Hennion M, Jiang N, Hart CM, Käs E, Cuvier O. BEAF regulates cell-cycle genes through the controlled deposition of H3K9 methylation marks into its conserved dual-core binding sites. Plos Biology. 6: 2896-910. PMID 19108610 DOI: 10.1371/Journal.Pbio.0060327  1
2006 Emberly E, Wingreen NS. Hourglass model for a protein-based circadian oscillator. Physical Review Letters. 96: 038303. PMID 16486780 DOI: 10.1103/Physrevlett.96.038303  1
2004 Schroeder MD, Pearce M, Fak J, Fan H, Unnerstall U, Emberly E, Rajewsky N, Siggia ED, Gaul U. Transcriptional control in the segmentation gene network of Drosophila. Plos Biology. 2: E271. PMID 15340490 DOI: 10.1371/Journal.Pbio.0020271  1
2004 Emberly EG, Mukhopadhyay R, Tang C, Wingreen NS. Flexibility of beta-sheets: principal component analysis of database protein structures. Proteins. 55: 91-8. PMID 14997543 DOI: 10.1002/Prot.10618  1
2004 Moelbert S, Emberly E, Tang C. Correlation between sequence hydrophobicity and surface-exposure pattern of database proteins Protein Science. 13: 752-762. PMID 14767075 DOI: 10.1110/Ps.03431704  1
2003 Mukhopadhyay R, Emberly E, Tang C, Wingreen NS. Statistical mechanics of RNA folding: importance of alphabet size. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 68: 041904. PMID 14682970 DOI: 10.1103/Physreve.68.041904  1
2003 Emberly EG, Kirczenow G. The smallest molecular switch. Physical Review Letters. 91: 188301. PMID 14611320 DOI: 10.1103/Physrevlett.91.188301  1
2003 Emberly EG, Mukhopadhyay R, Wingreen NS, Tang C. Flexibility of alpha-helices: results of a statistical analysis of database protein structures. Journal of Molecular Biology. 327: 229-37. PMID 12614621 DOI: 10.1016/S0022-2836(03)00097-4  1
2002 Emberly EG, Wingreen NS, Tang C. Designability of alpha-helical proteins. Proceedings of the National Academy of Sciences of the United States of America. 99: 11163-8. PMID 12177419 DOI: 10.1073/Pnas.162105999  1
2002 Emberly EG, Kirczenow G. Charging effects, forces, and conduction in molecular wire systems. Annals of the New York Academy of Sciences. 960: 131-42. PMID 11971794 DOI: 10.1111/J.1749-6632.2002.Tb03028.X  1
2002 Emberly EG, Miller J, Zeng C, Wingreen NS, Tang C. Identifying proteins of high designability via surface-exposure patterns. Proteins. 47: 295-304. PMID 11948783 DOI: 10.1002/Prot.10067  1
2002 Emberly EG, Kirczenow G. Molecular spintronics: Spin-dependent electron transport in molecular wires Chemical Physics. 281: 311-324. DOI: 10.1016/S0301-0104(02)00566-9  1
2001 Emberly EG, Kirczenow G. Comment on "First-principles calculation of transport properties of a molecular device". Physical Review Letters. 87: 269701. PMID 11800859 DOI: 10.1103/Physrevlett.87.269701  1
2001 Emberly EG, Kirczenow G. Models of electron transport through organic molecular monolayers self-assembled on nanoscale metallic contacts Physical Review B - Condensed Matter and Materials Physics. 64: 2354121-2354128. DOI: 10.1103/Physrevb.64.235412  1
2001 Emberly EG, Kirczenow G. Current-driven conformational changes, charging, and negative differential resistance in molecular wires Physical Review B - Condensed Matter and Materials Physics. 64: 1253181-1253185. DOI: 10.1103/Physrevb.64.125318  1
2001 Emberly EG, Kirczenow G. Comment on "first-principles calculation of transport properties of a molecular device", Physical Review Letters. 87: 2697011.  1
2000 Emberly EG, Kirczenow G. Multiterminal molecular wire systems: A self-consistent theory and computer simulations of charging and transport Physical Review B - Condensed Matter and Materials Physics. 62: 10451-10458. DOI: 10.1103/Physrevb.62.10451  1
2000 Emberly EG, Kirczenow G. Landauer theory, inelastic scattering, and electron transport in molecular wires Physical Review B - Condensed Matter and Materials Physics. 61: 5740-5750. DOI: 10.1103/Physrevb.61.5740  1
2000 Emberly E, Kirczenow G. Principles for the design and operation of a molecular wire transistor Journal of Applied Physics. 88: 5280-5282. DOI: 10.1063/1.1315627  1
1999 Emberly EG, Kirczenow G. Electron standing-wave formation in atomic wires Physical Review B - Condensed Matter and Materials Physics. 60: 6028-6033. DOI: 10.1103/Physrevb.60.6028  1
1999 Emberly E, Kirczenow G. Electrical conductance of molecular wires Nanotechnology. 10: 285-289. DOI: 10.1088/0957-4484/10/3/311  1
1999 Emberly EG, Kirczenow G. Antiresonances in molecular wires Journal of Physics Condensed Matter. 11: 6911-6926. DOI: 10.1088/0953-8984/11/36/308  1
1998 Emberly EG, Kirczenow G. Theory of electrical conduction through a molecule Annals of the New York Academy of Sciences. 852: 54-67. DOI: 10.1111/J.1749-6632.1998.Tb09864.X  1
1998 Emberly E, Kirczenow G. State orthogonalization by building a hilbert space: A new approach to electronic quantum transport in molecular wires Physical Review Letters. 81: 5205-5208. DOI: 10.1103/Physrevlett.81.5205  1
1998 Emberly EG, Kirczenow G. Theoretical study of electrical conduction through a molecule connected to metallic nanocontacts Physical Review B - Condensed Matter and Materials Physics. 58: 10911-10920. DOI: 10.1103/Physrevb.58.10911  1
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