Chirlmin Joo, Ph.D. - Publications

Affiliations: 
University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 

43 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Globyte V, Kim SH, Joo C. Single-Molecule View of Small RNA-Guided Target Search and Recognition. Annual Review of Biophysics. PMID 29595998 DOI: 10.1146/annurev-biophys-070317-032923  0.32
2017 Kim SH, Ahn T, Cui TJ, Chauhan S, Sung J, Joo C, Kim D. RecA filament maintains structural integrity using ATP-driven internal dynamics. Science Advances. 3: e1700676. PMID 28913424 DOI: 10.1126/sciadv.1700676  0.32
2016 Klein M, Chandradoss SD, Depken M, Joo C. Why Argonaute is needed to make microRNA target search fast and reliable. Seminars in Cell & Developmental Biology. PMID 27235676 DOI: 10.1016/j.semcdb.2016.05.017  0.72
2016 Irmler C, Adamczyk K, Aihara H, Angelini C, Aziz T, Babu V, Bacher S, Bahinipati S, Barberio E, Baroncelli T, Basith AK, Batignani G, Bauer A, Behera PK, Bergauer T, ... ... Joo C, et al. Construction and test of the first Belle II SVD ladder implementing the origami chip-on-sensor design Journal of Instrumentation. 11. DOI: 10.1088/1748-0221/11/01/C01087  0.72
2016 Thalmeier R, Iglesias M, Arteche F, Echeverria I, Friedl M, Adamczyk K, Aihara H, Angelini C, Aziz T, Babu V, Bacher S, Bahinipati S, Barberio E, Baroncelli T, Basith AK, ... ... Joo C, et al. EMC studies for the vertex detector of the Belle II experiment Journal of Instrumentation. 11. DOI: 10.1088/1748-0221/11/01/C01044  0.72
2015 Schirle NT, Sheu-Gruttadauria J, Chandradoss SD, Joo C, MacRae IJ. Water-mediated recognition of t1-adenosine anchors Argonaute2 to microRNA targets. Elife. 4. PMID 26359634 DOI: 10.7554/eLife.07646  0.72
2015 Yao Y, Docter M, van Ginkel J, de Ridder D, Joo C. Single-molecule protein sequencing through fingerprinting: computational assessment. Physical Biology. 12: 055003. PMID 26266455 DOI: 10.1088/1478-3975/12/5/055003  0.72
2015 Chandradoss SD, Schirle NT, Szczepaniak M, MacRae IJ, Joo C. A Dynamic Search Process Underlies MicroRNA Targeting. Cell. 162: 96-107. PMID 26140593 DOI: 10.1016/j.cell.2015.06.032  0.72
2015 Kim B, Ha M, Loeff L, Chang H, Simanshu DK, Li S, Fareh M, Patel DJ, Joo C, Kim VN. TUT7 controls the fate of precursor microRNAs by using three different uridylation mechanisms. The Embo Journal. 34: 1801-15. PMID 25979828 DOI: 10.15252/embj.201590931  0.72
2015 Kim S, Hwang J, Heo J, Ryu S, Lee D, Kim SH, Oh SJ, Joo C. Spectrally encoded slit confocal microscopy using a wavelength-swept laser. Journal of Biomedical Optics. 20: 36016. PMID 25813913 DOI: 10.1117/1.JBO.20.3.036016  0.32
2015 Blosser TR, Loeff L, Westra ER, Vlot M, Künne T, Sobota M, Dekker C, Brouns SJ, Joo C. Two distinct DNA binding modes guide dual roles of a CRISPR-Cas protein complex. Molecular Cell. 58: 60-70. PMID 25752578 DOI: 10.1016/j.molcel.2015.01.028  0.72
2015 Kim TJ, Joo C, Seong J, Vafabakhsh R, Botvinick EL, Berns MW, Palmer AE, Wang N, Ha T, Jakobsson E, Sun J, Wang Y. Distinct mechanisms regulating mechanical force-induced Ca²⁺ signals at the plasma membrane and the ER in human MSCs. Elife. 4: e04876. PMID 25667984 DOI: 10.7554/eLife.04876  0.72
2015 Park JH, Joo CK, Chung SK. Comparative study of tacrolimus and bevacizumab on corneal neovascularization in rabbits. Cornea. 34: 449-55. PMID 25651492 DOI: 10.1097/ICO.0000000000000336  0.32
2015 Kim SH, Park J, Joo C, Kim D, Ha T. Dynamic growth and shrinkage govern the pH dependence of RecA filament stability. Plos One. 10: e0115611. PMID 25608006 DOI: 10.1371/journal.pone.0115611  0.72
2015 Park J, Lee M, Min K, Choi JK, Joo CK, Park SC, Kang H, Pae S. Reliability of fine pitch COF: Influence of surface morphology and CuSn intermetallic compound formation Ieee International Reliability Physics Symposium Proceedings. 2015: CP41-CP42. DOI: 10.1109/IRPS.2015.7112791  0.32
2015 Park J, Hong J, Lee M, Sun D, Kang K, Kim T, Kim S, Kwon S, Joo C, Ha S, Kim W, Ryu J, Pae S. Contact resistance of solder bump with low cost photosensitive polyimide for high performance SoC Ieee International Reliability Physics Symposium Proceedings. 2015: CP31-CP32. DOI: 10.1109/IRPS.2015.7112790  0.32
2014 Kim SH, Ragunathan K, Park J, Joo C, Kim D, Ha T. Cooperative conformational transitions keep RecA filament active during ATPase cycle. Journal of the American Chemical Society. 136: 14796-800. PMID 25252114 DOI: 10.1021/ja506363y  0.72
2014 Lim SA, Joo CK, Kim MS, Chung SK. Expression of p53 and caspase-8 in lens epithelial cells of diabetic cataract. Journal of Cataract and Refractive Surgery. 40: 1102-8. PMID 24957431 DOI: 10.1016/j.jcrs.2013.12.015  0.32
2014 Chandradoss SD, Haagsma AC, Lee YK, Hwang JH, Nam JM, Joo C. Surface passivation for single-molecule protein studies. Journal of Visualized Experiments : Jove. PMID 24797261 DOI: 10.3791/50549  0.72
2014 Yoon J, Kwag J, Shin TJ, Park J, Lee YM, Lee Y, Park J, Heo J, Joo C, Park TJ, Yoo PJ, Kim S, Park J. Nanoparticles of conjugated polymers prepared from phase-separated films of phospholipids and polymers for biomedical applications. Advanced Materials (Deerfield Beach, Fla.). 26: 4559-64. PMID 24789764 DOI: 10.1002/adma.201400906  0.32
2013 Jung Y, Kim MS, Joo CK, Chung SK. Role of the intrinsic apoptotic pathway in cataractogenesis in type 2 diabetic patients. Journal of Cataract and Refractive Surgery. 39: 1470-6. PMID 23896389 DOI: 10.1016/j.jcrs.2013.03.036  0.32
2013 Kim SH, Joo C, Ha T, Kim D. Molecular mechanism of sequence-dependent stability of RecA filament. Nucleic Acids Research. 41: 7738-44. PMID 23804763 DOI: 10.1093/nar/gkt570  0.72
2013 Joo C, Fareh M, Kim VN. Bringing single-molecule spectroscopy to macromolecular protein complexes. Trends in Biochemical Sciences. 38: 30-7. PMID 23200186 DOI: 10.1016/j.tibs.2012.10.005  0.72
2012 Joo C, Ha T. Single-molecule FRET with total internal reflection microscopy. Cold Spring Harbor Protocols. 2012. PMID 23209135 DOI: 10.1101/pdb.top072058  0.72
2012 Joo C, Ha T. Prism-type total internal reflection microscopy for single-molecule FRET. Cold Spring Harbor Protocols. 2012. PMID 23209134 DOI: 10.1101/pdb.prot072041  0.72
2012 Joo C, Ha T. Objective-type total internal reflection microscopy (emission) for single-molecule FRET. Cold Spring Harbor Protocols. 2012: 1192-4. PMID 23118359 DOI: 10.1101/pdb.prot072033  0.72
2012 Joo C, Ha T. Objective-type total internal reflection microscopy (excitation) for single-molecule FRET. Cold Spring Harbor Protocols. 2012: 1189-91. PMID 23118358 DOI: 10.1101/pdb.prot072025  0.72
2012 Joo C, Ha T. Imaging and identifying impurities in single-molecule FRET studies. Cold Spring Harbor Protocols. 2012: 1109-12. PMID 23028079 DOI: 10.1101/pdb.prot071548  0.72
2012 Joo C, Ha T. Preparing sample chambers for single-molecule FRET. Cold Spring Harbor Protocols. 2012: 1104-8. PMID 23028078 DOI: 10.1101/pdb.prot071530  0.72
2012 Joo C, Ha T. Labeling proteins for single-molecule FRET. Cold Spring Harbor Protocols. 2012: 1009-12. PMID 22949718 DOI: 10.1101/pdb.prot071035  0.72
2012 Joo C, Ha T. Labeling DNA (or RNA) for single-molecule FRET. Cold Spring Harbor Protocols. 2012: 1005-8. PMID 22949717 DOI: 10.1101/pdb.prot071027  0.72
2012 Diao J, Ishitsuka Y, Lee H, Joo C, Su Z, Syed S, Shin YK, Yoon TY, Ha T. A single vesicle-vesicle fusion assay for in vitro studies of SNAREs and accessory proteins. Nature Protocols. 7: 921-34. PMID 22582418  0.72
2011 Ragunathan K, Joo C, Ha T. Real-time observation of strand exchange reaction with high spatiotemporal resolution. Structure (London, England : 1993). 19: 1064-73. PMID 21827943 DOI: 10.1016/j.str.2011.06.009  0.72
2011 Yeom KH, Heo I, Lee J, Hohng S, Kim VN, Joo C. Single-molecule approach to immunoprecipitated protein complexes: insights into miRNA uridylation. Embo Reports. 12: 690-6. PMID 21637296 DOI: 10.1038/embor.2011.100  0.52
2010 Lee J, Lee S, Ragunathan K, Joo C, Ha T, Hohng S. Single-molecule four-color FRET. Angewandte Chemie (International Ed. in English). 49: 9922-5. PMID 21104966 DOI: 10.1002/anie.201005402  0.72
2009 Heo I, Joo C, Kim YK, Ha M, Yoon MJ, Cho J, Yeom KH, Han J, Kim VN. TUT4 in Concert with Lin28 Suppresses MicroRNA Biogenesis through Pre-MicroRNA Uridylation Cell. 138: 696-708. PMID 19703396 DOI: 10.1016/j.cell.2009.08.002  0.72
2008 Joo C, Balci H, Ishitsuka Y, Buranachai C, Ha T. Advances in single-molecule fluorescence methods for molecular biology. Annual Review of Biochemistry. 77: 51-76. PMID 18412538 DOI: 10.1146/annurev.biochem.77.070606.101543  0.72
2007 Cisse I, Okumus B, Joo C, Ha T. Fueling protein DNA interactions inside porous nanocontainers. Proceedings of the National Academy of Sciences of the United States of America. 104: 12646-50. PMID 17563361 DOI: 10.1073/pnas.0610673104  0.72
2006 Joo C, McKinney SA, Nakamura M, Rasnik I, Myong S, Ha T. Real-time observation of RecA filament dynamics with single monomer resolution. Cell. 126: 515-27. PMID 16901785 DOI: 10.1016/j.cell.2006.06.042  0.72
2006 McKinney SA, Joo C, Ha T. Analysis of single-molecule FRET trajectories using hidden Markov modeling. Biophysical Journal. 91: 1941-51. PMID 16766620 DOI: 10.1529/biophysj.106.082487  0.72
2005 Myong S, Rasnik I, Joo C, Lohman TM, Ha T. Repetitive shuttling of a motor protein on DNA. Nature. 437: 1321-5. PMID 16251956 DOI: 10.1038/nature04049  0.72
2004 Hohng S, Joo C, Ha T. Single-molecule three-color FRET Biophysical Journal. 87: 1328-1337. PMID 15298935 DOI: 10.1529/biophysj.104.043935  0.72
2004 Joo C, McKinney SA, Lilley DM, Ha T. Exploring rare conformational species and ionic effects in DNA Holliday junctions using single-molecule spectroscopy. Journal of Molecular Biology. 341: 739-51. PMID 15288783 DOI: 10.1016/j.jmb.2004.06.024  0.72
Show low-probability matches.