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Julian C. Niles, Ph.D. - Publications

Affiliations: 
2000 Georgia Institute of Technology, Atlanta, GA 
Area:
Atomic Physics
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30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Sidik SM, Huet D, Ganesan SM, Huynh MH, Wang T, Nasamu AS, Thiru P, Saeij JP, Carruthers VB, Niles JC, Lourido S. A Genome-wide CRISPR Screen in Toxoplasma Identifies Essential Apicomplexan Genes. Cell. PMID 27594426 DOI: 10.1016/j.cell.2016.08.019  0.4
2016 Dankwa S, Lim C, Bei AK, Jiang RH, Abshire JR, Patel SD, Goldberg JM, Moreno Y, Kono M, Niles JC, Duraisingh MT. Ancient human sialic acid variant restricts an emerging zoonotic malaria parasite. Nature Communications. 7: 11187. PMID 27041489 DOI: 10.1038/ncomms11187  0.4
2016 Ganesan SM, Falla A, Goldfless SJ, Nasamu AS, Niles JC. Synthetic RNA-protein modules integrated with native translation mechanisms to control gene expression in malaria parasites. Nature Communications. 7: 10727. PMID 26925876 DOI: 10.1038/ncomms10727  0.4
2015 Birch CM, Hou HW, Han J, Niles JC. Identification of malaria parasite-infected red blood cell surface aptamers by inertial microfluidic SELEX (I-SELEX). Scientific Reports. 5: 11347. PMID 26126714 DOI: 10.1038/srep11347  0.4
2014 Goldfless SJ, Wagner JC, Niles JC. Versatile control of Plasmodium falciparum gene expression with an inducible protein-RNA interaction. Nature Communications. 5: 5329. PMID 25370483 DOI: 10.1038/ncomms6329  0.4
2014 Wagner JC, Platt RJ, Goldfless SJ, Zhang F, Niles JC. Efficient CRISPR-Cas9-mediated genome editing in Plasmodium falciparum. Nature Methods. 11: 915-8. PMID 25108687 DOI: 10.1038/nmeth.3063  0.44
2013 Wagner JC, Goldfless SJ, Ganesan SM, Lee MC, Fidock DA, Niles JC. An integrated strategy for efficient vector construction and multi-gene expression in Plasmodium falciparum. Malaria Journal. 12: 373. PMID 24160265 DOI: 10.1186/1475-2875-12-373  0.4
2012 Belmont BJ, Niles JC. Inducible control of subcellular RNA localization using a synthetic protein-RNA aptamer interaction. Plos One. 7: e46868. PMID 23056498 DOI: 10.1371/journal.pone.0046868  0.4
2012 Zhao W, Dauwels J, Niles JC, Cao J. Computational synchronization of microarray data with application to Plasmodium falciparum. Proteome Science. 10: S10. PMID 22759568 DOI: 10.1186/1477-5956-10-S1-S10  0.36
2012 Niles JC. Malarial parasites accumulate labile zinc pools. Chemistry & Biology. 19: 660-1. PMID 22726676 DOI: 10.1016/j.chembiol.2012.06.003  0.4
2012 Goldfless SJ, Belmont BJ, de Paz AM, Liu JF, Niles JC. Direct and specific chemical control of eukaryotic translation with a synthetic RNA-protein interaction. Nucleic Acids Research. 40: e64. PMID 22275521 DOI: 10.1093/nar/gks028  0.4
2011 Kang JW, Lue N, Kong CR, Barman I, Dingari NC, Goldfless SJ, Niles JC, Dasari RR, Feld MS. Combined confocal Raman and quantitative phase microscopy system for biomedical diagnosis. Biomedical Optics Express. 2: 2484-92. PMID 21991542 DOI: 10.1364/BOE.2.002484  0.4
2011 Bow H, Pivkin IV, Diez-Silva M, Goldfless SJ, Dao M, Niles JC, Suresh S, Han J. A microfabricated deformability-based flow cytometer with application to malaria. Lab On a Chip. 11: 1065-73. PMID 21293801 DOI: 10.1039/c0lc00472c  0.4
2010 Belmont BJ, Niles JC. Engineering a direct and inducible protein-RNA interaction to regulate RNA biology. Acs Chemical Biology. 5: 851-61. PMID 20545348 DOI: 10.1021/cb100070j  0.4
2009 Niles JC, Derisi JL, Marletta MA. Inhibiting Plasmodium falciparum growth and heme detoxification pathway using heme-binding DNA aptamers. Proceedings of the National Academy of Sciences of the United States of America. 106: 13266-71. PMID 19633187 DOI: 10.1073/pnas.0906370106  0.4
2006 Niles JC, Marletta MA. Utilizing RNA aptamers to probe a physiologically important heme-regulated cellular network. Acs Chemical Biology. 1: 515-24. PMID 17168539 DOI: 10.1021/cb6002527  0.4
2006 Niles JC, Wishnok JS, Tannenbaum SR. Peroxynitrite-induced oxidation and nitration products of guanine and 8-oxoguanine: structures and mechanisms of product formation. Nitric Oxide : Biology and Chemistry / Official Journal of the Nitric Oxide Society. 14: 109-21. PMID 16352449 DOI: 10.1016/j.niox.2005.11.001  0.4
2005 Henderson PT, Neeley WL, Delaney JC, Gu F, Niles JC, Hah SS, Tannenbaum SR, Essigmann JM. Urea lesion formation in DNA as a consequence of 7,8-dihydro-8-oxoguanine oxidation and hydrolysis provides a potent source of point mutations. Chemical Research in Toxicology. 18: 12-8. PMID 15651843 DOI: 10.1021/tx049757k  0.32
2004 Niles JC, Wishnok JS, Tannenbaum SR. Spiroiminodihydantoin and guanidinohydantoin are the dominant products of 8-oxoguanosine oxidation at low fluxes of peroxynitrite: mechanistic studies with 18O. Chemical Research in Toxicology. 17: 1510-9. PMID 15540949 DOI: 10.1021/tx0400048  0.4
2004 Niles JC, Wishnok JS, Tannenbaum SR. Mass spectrometric identification of 4-hydroxy-2,5-dioxo-imidazolidine-4-carboxylic acid during oxidation of 8-oxoguanosine by peroxynitrite and KHSO5/CoCl2. Chemical Research in Toxicology. 17: 1501-9. PMID 15540948 DOI: 10.1021/tx040003f  0.4
2004 Yu H, Niles JC, Wishnok JS, Tannenbaum SR. Spirodihydantoin is a minor product of 5-hydroxyisourate in urate oxidation. Organic Letters. 6: 3417-20. PMID 15355066 DOI: 10.1021/ol048547w  0.4
2002 Lee JM, Niles JC, Wishnok JS, Tannenbaum SR. Peroxynitrite reacts with 8-nitropurines to yield 8-oxopurines. Chemical Research in Toxicology. 15: 7-14. PMID 11800591 DOI: 10.1021/tx010093d  0.4
2001 Niles JC, Wishnok JS, Tannenbaum SR. A novel nitroimidazole compound formed during the reaction of peroxynitrite with 2',3',5'-tri-O-acetyl-guanosine. Journal of the American Chemical Society. 123: 12147-51. PMID 11734012 DOI: 10.1021/ja004296k  0.4
2001 Niles JC, Wishnok JS, Tannenbaum SR. Spiroiminodihydantoin is the major product of the 8-oxo-7,8-dihydroguanosine reaction with peroxynitrite in the presence of thiols and guanosine photooxidation by methylene blue Organic Letters. 3: 963-966. PMID 11277770 DOI: 10.5555/ol006993n  0.4
2000 Niles JC, Wishnok JS, Tannenbaum SR. A novel nitration product formed during the reaction of peroxynitrite with 2',3',5'-tri-O-acetyl-7,8-dihydro-8-oxoguanosine: N-nitro-N'-[1-(2,3,5- tri-O-acetyl-β-D-erythro-pentofuranosyl)-2,4-dioxoimidazolidin-5- ylidene]guanidine Chemical Research in Toxicology. 13: 390-396. PMID 10813656 DOI: 10.1021/tx0000318  0.4
1999 Niles JC, Burney S, Singh SP, Wishnok JS, Tannenbaum SR. Peroxynitrite reaction products of 3',5'-di-O-acetyl-8-oxo-7, 8-dihydro-2'-deoxyguanosine. Proceedings of the National Academy of Sciences of the United States of America. 96: 11729-34. PMID 10518518  0.32
1999 Burney S, Niles JC, Dedon PC, Tannenbaum SR. DNA damage in deoxynucleosides and oligonucleotides treated with peroxynitrite Chemical Research in Toxicology. 12: 513-520. PMID 10368314 DOI: 10.1021/tx980254m  0.4
1999 Tretyakova NY, Niles JC, Burney S, Wishnok JS, Tannenbaum SR. Peroxynitrite-induced reactions of synthetic oligonucleotides containing 8-Oxoguanine Chemical Research in Toxicology. 12: 459-466. PMID 10328757 DOI: 10.1021/tx980235c  0.4
1999 Burney S, Caulfield JL, Niles JC, Wishnok JS, Tannenbaum SR. The chemistry of DNA damage from nitric oxide and peroxynitrite Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 424: 37-49. PMID 10064848 DOI: 10.1016/S0027-5107(99)00006-8  0.4
1999 Niles JC, Burney S, Sing SP, Wishnok JS, Tannenbaum SR. Peroxynitrite reaction products of 3',5'-di-O-acetyl-8-oxo-7,8-dihydro- 2'-deoxyguanosine Proceedings of the National Academy of Sciences of the United States of America. 96: 11729-11734. DOI: 10.1073/pnas.96.21.11729  0.4
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