| Year |
Citation |
Score |
| 2016 |
Tal G, Boca SM, Mittenthal J, Caetano-Anollés G. A Dynamic Model for the Evolution of Protein Structure. Journal of Molecular Evolution. PMID 27146880 DOI: 10.1007/S00239-016-9740-1 |
0.351 |
|
| 2015 |
Shahzad K, Mittenthal JE, Caetano-Anollés G. The organization of domains in proteins obeys Menzerath-Altmann's law of language. Bmc Systems Biology. 9: 44. PMID 26260760 DOI: 10.1186/S12918-015-0192-9 |
0.337 |
|
| 2014 |
Caetano-Anollés G, Mittenthal JE, Caetano-Anollés D, Kim KM. A calibrated chronology of biochemistry reveals a stem line of descent responsible for planetary biodiversity. Frontiers in Genetics. 5: 306. PMID 25309572 DOI: 10.3389/Fgene.2014.00306 |
0.346 |
|
| 2014 |
Caetano-Anollés G, Nasir A, Zhou K, Caetano-Anollés D, Mittenthal JE, Sun FJ, Kim KM. Archaea: the first domain of diversified life. Archaea (Vancouver, B.C.). 2014: 590214. PMID 24987307 DOI: 10.1155/2014/590214 |
0.351 |
|
| 2013 |
Kim HS, Mittenthal JE, Caetano-Anollés G. Widespread Recruitment of Ancient Domain Structures in Modern Enzymes during Metabolic Evolution. Journal of Integrative Bioinformatics. 10: 1-18. PMID 29220914 DOI: 10.1515/jib-2013-214 |
0.321 |
|
| 2013 |
Yafremava LS, Wielgos M, Thomas S, Nasir A, Wang M, Mittenthal JE, Caetano-Anollés G. A general framework of persistence strategies for biological systems helps explain domains of life. Frontiers in Genetics. 4: 16. PMID 23443991 DOI: 10.3389/Fgene.2013.00016 |
0.331 |
|
| 2013 |
Kim HS, Mittenthal JE, Caetano-Anollés G. Widespread recruitment of ancient domain structures in modern enzymes during metabolic evolution. Journal of Integrative Bioinformatics. 10: 214. PMID 23406778 DOI: 10.2390/Biecoll-Jib-2013-214 |
0.404 |
|
| 2012 |
Mittenthal J, Caetano-Anollés D, Caetano-Anollés G. Biphasic patterns of diversification and the emergence of modules. Frontiers in Genetics. 3: 147. PMID 22891076 DOI: 10.3389/Fgene.2012.00147 |
0.408 |
|
| 2011 |
Mittenthal JE, Zou L. To signal a conjunction of many inputs negative regulation is likely. Mathematical Biosciences. 231: 69-75. PMID 21329701 DOI: 10.1016/J.Mbs.2011.02.001 |
0.521 |
|
| 2011 |
Caetano-Anollés D, Kim KM, Mittenthal JE, Caetano-Anollés G. Proteome evolution and the metabolic origins of translation and cellular life. Journal of Molecular Evolution. 72: 14-33. PMID 21082171 DOI: 10.1007/S00239-010-9400-9 |
0.42 |
|
| 2011 |
Wang M, Jiang YY, Kim KM, Qu G, Ji HF, Mittenthal JE, Zhang HY, Caetano-Anollés G. A universal molecular clock of protein folds and its power in tracing the early history of aerobic metabolism and planet oxygenation. Molecular Biology and Evolution. 28: 567-82. PMID 20805191 DOI: 10.1093/Molbev/Msq232 |
0.393 |
|
| 2010 |
Caetano-Anollés G, Mittenthal J. Exploring the interplay of stability and function in protein evolution: new methods further elucidate why protein stability is necessarily so tenuous and stability-increasing mutations compromise biological function. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 32: 655-8. PMID 20658703 DOI: 10.1002/Bies.201000038 |
0.322 |
|
| 2009 |
Caetano-Anollés G, Wang M, Caetano-Anollés D, Mittenthal JE. The origin, evolution and structure of the protein world. The Biochemical Journal. 417: 621-37. PMID 19133840 DOI: 10.1042/Bj20082063 |
0.414 |
|
| 2009 |
Caetano-Anollés G, Yafremava LS, Gee H, Caetano-Anollés D, Kim HS, Mittenthal JE. The origin and evolution of modern metabolism. The International Journal of Biochemistry & Cell Biology. 41: 285-97. PMID 18790074 DOI: 10.1016/J.Biocel.2008.08.022 |
0.413 |
|
| 2008 |
Caetano-Anolles G, Sun FJ, Wang M, Yafremava LS, Harish A, Kim HS, Knudsen V, Caetano-Anolles D, Mittenthal JE. Origins and evolution of modern biochemistry: insights from genomes and molecular structure. Frontiers in Bioscience : a Journal and Virtual Library. 13: 5212-40. PMID 18508583 DOI: 10.2741/3077 |
0.451 |
|
| 2007 |
Wang M, Yafremava LS, Caetano-Anollés D, Mittenthal JE, Caetano-Anollés G. Reductive evolution of architectural repertoires in proteomes and the birth of the tripartite world. Genome Research. 17: 1572-85. PMID 17908824 DOI: 10.1101/Gr.6454307 |
0.366 |
|
| 2007 |
Caetano-Anollés G, Kim HS, Mittenthal JE. The origin of modern metabolic networks inferred from phylogenomic analysis of protein architecture. Proceedings of the National Academy of Sciences of the United States of America. 104: 9358-63. PMID 17517598 DOI: 10.1073/Pnas.0701214104 |
0.403 |
|
| 2006 |
Kim HS, Mittenthal JE, Caetano-Anollés G. MANET: tracing evolution of protein architecture in metabolic networks. Bmc Bioinformatics. 7: 351. PMID 16854231 DOI: 10.1186/1471-2105-7-351 |
0.445 |
|
| 2006 |
Wang M, Boca SM, Kalelkar R, Mittenthal JE, Caetano-Anolles G. A phylogenomic reconstruction of the protein world based on a genomic census of protein fold architecture Complexity. 12: 27-40. DOI: 10.1002/Cplx.20141 |
0.387 |
|
| 2004 |
Clarke B, Fawcett G, Mittenthal JE. Netscan: a procedure for generating reaction networks by size. Journal of Theoretical Biology. 230: 591-602. PMID 15363678 DOI: 10.1016/J.Jtbi.2004.03.026 |
0.349 |
|
| 2003 |
Mittenthal J, Clarke B, Scheeline A. How cells avoid errors in metabolic and signaling networks International Journal of Modern Physics B. 17: 2005-2022. DOI: 10.1142/S0217979203018028 |
0.378 |
|
| 2001 |
Mittenthal JE, Clarke B, Waddell TG, Fawcett G. A new method for assembling metabolic networks, with application to the Krebs citric acid cycle. Journal of Theoretical Biology. 208: 361-82. PMID 11207096 DOI: 10.1006/Jtbi.2000.2225 |
0.391 |
|
| 1998 |
Mittenthal JE, Yuan A, Clarke B, Scheeline A. Designing metabolism: Alternative connectivities for the pentose phosphate pathway Bulletin of Mathematical Biology. 60: 815-856. DOI: 10.1006/Bulm.1997.0043 |
0.419 |
|
| 1993 |
Clarke B, Mittenthal JE, Senn M. A model for the evolution of networks of genes. Journal of Theoretical Biology. 165: 269-89. PMID 8114498 DOI: 10.1006/Jtbi.1993.1189 |
0.38 |
|
| 1992 |
Clarke BS, Mittenthal JE. Modularity and reliability in the organization of organisms Bulletin of Mathematical Biology. 54: 1-20. PMID 25665658 DOI: 10.1016/S0092-8240(05)80173-9 |
0.387 |
|
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