Year |
Citation |
Score |
2023 |
Kimchi O, Brenner MP, Colwell LJ. Nucleic Acid Structure Prediction Including Pseudoknots Through Direct Enumeration of States: A User's Guide to the LandscapeFold Algorithm. Methods in Molecular Biology (Clifton, N.J.). 2586: 49-77. PMID 36705898 DOI: 10.1007/978-1-0716-2768-6_4 |
0.615 |
|
2022 |
Dillavou S, Bar-Sinai Y, Brenner MP, Rubinstein SM. Beyond quality and quantity: Spatial distribution of contact encodes frictional strength. Physical Review. E. 106: L033001. PMID 36266884 DOI: 10.1103/PhysRevE.106.L033001 |
0.607 |
|
2022 |
Du CX, Zhang HA, Pearson TG, Ng J, McEuen PL, Cohen I, Brenner MP. Programming interactions in magnetic handshake materials. Soft Matter. PMID 35979744 DOI: 10.1039/d2sm00604a |
0.757 |
|
2021 |
Shrinivas K, Brenner MP. Phase separation in fluids with many interacting components. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34725154 DOI: 10.1073/pnas.2108551118 |
0.755 |
|
2020 |
McKeown R, Ostilla-Mónico R, Pumir A, Brenner MP, Rubinstein SM. Turbulence generation through an iterative cascade of the elliptical instability. Science Advances. 6: eaaz2717. PMID 32158950 DOI: 10.1126/Sciadv.Aaz2717 |
0.663 |
|
2019 |
Falk MJ, Duwel A, Colwell LJ, Brenner MP. Collagen-Inspired Self-Assembly of Twisted Filaments. Physical Review Letters. 123: 238102. PMID 31868483 DOI: 10.1103/Physrevlett.123.238102 |
0.661 |
|
2019 |
Niu R, Du CX, Esposito E, Ng J, Brenner MP, McEuen PL, Cohen I. Magnetic handshake materials as a scale-invariant platform for programmed self-assembly. Proceedings of the National Academy of Sciences of the United States of America. PMID 31754038 DOI: 10.1073/Pnas.1910332116 |
0.757 |
|
2019 |
Kimchi O, Cragnolini T, Brenner MP, Colwell LJ. A Polymer Physics Framework for the Entropy of Arbitrary Pseudoknots. Biophysical Journal. 117: 520-532. PMID 31353036 DOI: 10.1016/J.Bpj.2019.06.037 |
0.658 |
|
2019 |
McCloskey K, Taly A, Monti F, Brenner MP, Colwell LJ. Using attribution to decode binding mechanism in neural network models for chemistry. Proceedings of the National Academy of Sciences of the United States of America. PMID 31127041 DOI: 10.1073/Pnas.1820657116 |
0.638 |
|
2019 |
Kimchi O, Cragnolini T, Garmann R, Manoharan VN, Brenner MP, Colwell LJ. RNA Structure and Kinetics Including Pseudoknots through Complete Landscape Enumeration Biophysical Journal. 116: 353a-354a. DOI: 10.1016/J.Bpj.2018.11.1922 |
0.633 |
|
2018 |
McKeown R, Ostilla-Mónico R, Pumir A, Brenner MP, Rubinstein SM. Cascade leading to the emergence of small structures in vortex ring collisions Physical Review Fluids. 3. DOI: 10.1103/Physrevfluids.3.124702 |
0.667 |
|
2017 |
Lee AA, Brenner MP, Colwell LJ. Optimal Design of Experiments by Combining Coarse and Fine Measurements. Physical Review Letters. 119: 208101. PMID 29219382 DOI: 10.1103/Physrevlett.119.208101 |
0.66 |
|
2017 |
Tanaka H, Lee AA, Brenner MP. Hot particles attract in a cold bath Physical Review Fluids. 2. DOI: 10.1103/Physrevfluids.2.043103 |
0.507 |
|
2016 |
Goodrich CP, Brenner MP. Using active colloids as machines to weave and braid on the micrometer scale. Proceedings of the National Academy of Sciences of the United States of America. PMID 28034922 DOI: 10.1073/Pnas.1608838114 |
0.304 |
|
2016 |
Tanaka H, Zeravcic Z, Brenner MP. Mutation at Expanding Front of Self-Replicating Colloidal Clusters. Physical Review Letters. 117: 238004. PMID 27982625 DOI: 10.1103/Physrevlett.117.238004 |
0.516 |
|
2016 |
Lee AA, Brenner MP, Colwell LJ. Predicting protein-ligand affinity with a random matrix framework. Proceedings of the National Academy of Sciences of the United States of America. PMID 27856761 DOI: 10.1073/Pnas.1611138113 |
0.645 |
|
2016 |
Wang X, Koehler SA, Wilking JN, Sinha NN, Cabeen MT, Srinivasan S, Seminara A, Rubinstein S, Sun Q, Brenner MP, Weitz DA. Probing phenotypic growth in expanding Bacillus subtilis biofilms. Applied Microbiology and Biotechnology. PMID 27003268 DOI: 10.1007/S00253-016-7461-4 |
0.721 |
|
2015 |
Mangan NM, Brenner MP. Correction: Systems analysis of the CO₂ concentrating mechanism in cyanobacteria. Elife. 4. PMID 25811952 DOI: 10.7554/Elife.06400 |
0.691 |
|
2015 |
Sher MJ, Mangan NM, Smith MJ, Lin YT, Marbach S, Schneider TM, Gradečak S, Brenner MP, Mazur E. Femtosecond-laser hyperdoping silicon in an SF6 atmosphere: Dopant incorporation mechanism Journal of Applied Physics. 117. DOI: 10.1063/1.4914520 |
0.702 |
|
2015 |
Lin YT, Mangan N, Marbach S, Schneider TM, Deng G, Zhou S, Brenner MP, Mazur E. Creating femtosecond-laser-hyperdoped silicon with a homogeneous doping profile Applied Physics Letters. 106. DOI: 10.1063/1.4907988 |
0.703 |
|
2014 |
Colwell LJ, Brenner MP, Murray AW. Conservation weighting functions enable covariance analyses to detect functionally important amino acids. Plos One. 9: e107723. PMID 25379728 DOI: 10.1371/Journal.Pone.0107723 |
0.644 |
|
2014 |
Zeravcic Z, Manoharan VN, Brenner MP. Size limits of self-assembled colloidal structures made using specific interactions. Proceedings of the National Academy of Sciences of the United States of America. 111: 15918-23. PMID 25349380 DOI: 10.1073/Pnas.1411765111 |
0.303 |
|
2014 |
Mangan N, Brenner M. Systems analysis of the CO2 concentrating mechanism in cyanobacteria. Elife. e02043. PMID 24842993 DOI: 10.7554/Elife.02043 |
0.698 |
|
2014 |
Colwell LJ, Qin Y, Huntley M, Manta A, Brenner MP. Feynman-Hellmann theorem and signal identification from sample covariance matrices Physical Review X. 4. DOI: 10.1103/Physrevx.4.031032 |
0.663 |
|
2014 |
Rowat AC, Sinha NN, Sorensen PM, Campàs O, Castells P, Rosenberg D, Brenner MP, Weitz DA. The kitchen as a physics classroom Physics Education. 49: 512-522. DOI: 10.1088/0031-9120/49/5/512 |
0.56 |
|
2013 |
Holmes-Cerfon M, Gortler SJ, Brenner MP. A geometrical approach to computing free-energy landscapes from short-ranged potentials Proceedings of the National Academy of Sciences of the United States of America. 110: E5-E14. PMID 23248296 DOI: 10.1073/Pnas.1211720110 |
0.32 |
|
2013 |
Hormoz S, Brenner MP. Non-universal and non-singular asymptotics of interacting vortex filaments Procedia Iutam. 7: 97-106. DOI: 10.1016/J.Piutam.2013.03.012 |
0.692 |
|
2012 |
Qin Y, Schneider TM, Brenner MP. Sequencing by hybridization of long targets Plos One. 7. PMID 22574124 DOI: 10.1371/Journal.Pone.0035819 |
0.391 |
|
2012 |
Kolinski JM, Rubinstein SM, Mandre S, Brenner MP, Weitz DA, Mahadevan L. Skating on a film of air: drops impacting on a surface. Physical Review Letters. 108: 074503. PMID 22401209 DOI: 10.1103/Physrevlett.108.074503 |
0.643 |
|
2012 |
Kaz DM, McGorty R, Mani M, Brenner MP, Manoharan VN. Physical ageing of the contact line on colloidal particles at liquid interfaces. Nature Materials. 11: 138-42. PMID 22138792 DOI: 10.1038/Nmat3190 |
0.562 |
|
2012 |
Kolinski JM, Rubinstein SM, Mandre S, Brenner MP, Weitz DA, Mahadevan L. Skating on a film of air: Drops impacting on a surface Physical Review Letters. 108. DOI: 10.1103/PhysRevLett.108.074503 |
0.592 |
|
2012 |
Kaz DM, McGorty R, Mani M, Brenner MP, Manoharan VN. Physical ageing of the contact line on colloidal particles at liquid interfaces Nature Materials. 11: 138-142. DOI: 10.1038/nmat3190 |
0.477 |
|
2012 |
Hormoz S, Brenner MP. Absence of singular stretching of interacting vortex filaments Journal of Fluid Mechanics. 707: 191-204. DOI: 10.1017/Jfm.2012.270 |
0.695 |
|
2012 |
Mandre S, Brenner MP. The mechanism of a splash on a dry solid surface Journal of Fluid Mechanics. 690: 148-172. DOI: 10.1017/Jfm.2011.415 |
0.323 |
|
2011 |
Norris SA, Samela J, Bukonte L, Backman M, Djurabekova F, Nordlund K, Madi CS, Brenner MP, Aziz MJ. Molecular dynamics of single-particle impacts predicts phase diagrams for large scale pattern formation. Nature Communications. 2: 276. PMID 21505432 DOI: 10.1038/Ncomms1280 |
0.317 |
|
2011 |
Ilievski F, Mani M, Whitesides GM, Brenner MP. Self-assembly of magnetically interacting cubes by a turbulent fluid flow. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 83: 017301. PMID 21405794 DOI: 10.1103/Physreve.83.017301 |
0.566 |
|
2011 |
Hormoz S, Brenner MP. Design principles for self-assembly with short-range interactions Proceedings of the National Academy of Sciences of the United States of America. 108: 5193-5198. PMID 21383135 DOI: 10.1073/Pnas.1014094108 |
0.687 |
|
2011 |
Arkus N, Manoharan VN, Brenner MP. Deriving finite sphere packings Siam Journal On Discrete Mathematics. 25: 1860-1901. DOI: 10.1137/100784424 |
0.756 |
|
2011 |
Ilievski F, Mani M, Whitesides GM, Brenner MP. Self-assembly of magnetically interacting cubes by a turbulent fluid flow Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 83. DOI: 10.1103/PhysRevE.83.017301 |
0.495 |
|
2010 |
Colwell LJ, Brenner MP, Ribbeck K. Charge as a selection criterion for translocation through the nuclear pore complex. Plos Computational Biology. 6: e1000747. PMID 20421988 DOI: 10.1371/Journal.Pcbi.1000747 |
0.647 |
|
2010 |
Meng G, Arkus N, Brenner MP, Manoharan VN. The free-energy landscape of clusters of attractive hard spheres. Science (New York, N.Y.). 327: 560-3. PMID 20110500 DOI: 10.1126/Science.1181263 |
0.764 |
|
2010 |
Colwell LJ, Brenner MP, Ribbeck K. Charge as a selection criterion for translocation through the nuclear pore complex Plos Computational Biology. 6. DOI: 10.1371/journal.pcbi.1000747 |
0.606 |
|
2010 |
Meng G, Arkus N, Brenner MP, Manoharan VN. The free-energy landscape of clusters of attractive hard spheres Science. 327: 560-563. DOI: 10.1126/science.1181263 |
0.757 |
|
2010 |
van Hoeve W, Gekle S, Snoeijer JH, Versluis M, Brenner MP, Lohse D. Breakup of diminutive Rayleigh jets Physics of Fluids. 22. DOI: 10.1063/1.3524533 |
0.483 |
|
2010 |
Mani M, Mandre S, Brenner MP. Events before droplet splashing on a solid surface Journal of Fluid Mechanics. 647: 163-185. DOI: 10.1017/S0022112009993594 |
0.578 |
|
2009 |
Arkus N, Manoharan VN, Brenner MP. Minimal energy clusters of hard spheres with short range attractions. Physical Review Letters. 103: 118303. PMID 19792406 DOI: 10.1103/Physrevlett.103.118303 |
0.761 |
|
2009 |
Mandre S, Mani M, Brenner MP. Precursors to splashing of liquid droplets on a solid surface. Physical Review Letters. 102: 134502. PMID 19392358 DOI: 10.1103/Physrevlett.102.134502 |
0.559 |
|
2009 |
Colwell LJ, Brenner MP. Action potential initiation in the Hodgkin-Huxley model Plos Computational Biology. 5. PMID 19148265 DOI: 10.1371/Journal.Pcbi.1000265 |
0.655 |
|
2009 |
Arkus N, Manoharan VN, Brenner MP. Minimal energy clusters of hard spheres with short range attractions Physical Review Letters. 103. DOI: 10.1103/PhysRevLett.103.118303 |
0.758 |
|
2009 |
Mandre S, Mani M, Brenner MP. Precursors to splashing of liquid droplets on a solid surface Physical Review Letters. 102. DOI: 10.1103/PhysRevLett.102.134502 |
0.483 |
|
2008 |
Brenner MP, Lohse D. Dynamic equilibrium mechanism for surface nanobubble stabilization. Physical Review Letters. 101: 214505. PMID 19113416 DOI: 10.1103/Physrevlett.101.214505 |
0.457 |
|
2008 |
Brenner MP, Lohse D. Dynamic equilibrium mechanism for surface nanobubble stabilization Physical Review Letters. 101. DOI: 10.1103/PhysRevLett.101.214505 |
0.36 |
|
2008 |
Roper M, Squires TM, Brenner MP. Symmetry unbreaking in the shapes of perfect projectiles Physics of Fluids. 20. DOI: 10.1063/1.2982500 |
0.581 |
|
2007 |
Alben S, Brenner MP. Self-assembly of flat sheets into closed surfaces. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 75: 056113. PMID 17677139 DOI: 10.1103/Physreve.75.056113 |
0.301 |
|
2007 |
Paruchuri S, Brenner MP. Splitting of a liquid jet. Physical Review Letters. 98: 134502. PMID 17501205 DOI: 10.1103/Physrevlett.98.134502 |
0.645 |
|
2007 |
Paruchuri S, Brenner MP. Splitting of a liquid jet Physical Review Letters. 98. DOI: 10.1103/PhysRevLett.98.134502 |
0.599 |
|
2006 |
Schnall-Levin M, Lauga E, Brenner MP. Self-assembly of spherical particles on an evaporating sessile droplet. Langmuir : the Acs Journal of Surfaces and Colloids. 22: 4547-51. PMID 16649762 DOI: 10.1021/La052921Z |
0.554 |
|
2006 |
Schnall-Levin M, Lauga E, Brenner MP. Self-assembly of spherical particles on an evaporating sessile droplet Langmuir. 22: 4547-4551. DOI: 10.1021/la052921z |
0.469 |
|
2005 |
Chen HH, Urquidez OA, Ichim S, Rodriquez LH, Brenner MP, Aziz MJ. Shocks in ion sputtering sharpen steep surface features. Science (New York, N.Y.). 310: 294-7. PMID 16224017 DOI: 10.1126/Science.1117219 |
0.485 |
|
2004 |
Lauga E, Brenner MP. Evaporation-driven assembly of colloidal particles Physical Review Letters. 93. PMID 15601211 DOI: 10.1103/Physrevlett.93.238301 |
0.539 |
|
2004 |
Lauga E, Brenner MP. Dynamic mechanisms for apparent slip on hydrophobic surfaces. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 70: 026311. PMID 15447592 DOI: 10.1103/Physreve.70.026311 |
0.554 |
|
2004 |
Chen HH, Brenner MP. The optimal faucet. Physical Review Letters. 92: 166106. PMID 15169248 DOI: 10.1103/Physrevlett.92.166106 |
0.48 |
|
2004 |
Chen HH, Brenner MP. The optimal faucet Physical Review Letters. 92: 166106-1. DOI: 10.1103/PhysRevLett.92.166106 |
0.318 |
|
2004 |
Lauga E, Brenner MP. Dynamic mechanisms for apparent slip on hydrophobic surfaces Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 70: 026311-1-026311-7. DOI: 10.1103/PhysRevE.70.026311 |
0.461 |
|
2003 |
Brenner MP, Paruchuri S. Thermal bending of liquid sheets and jets Physics of Fluids. 15: 3568-3571. DOI: 10.1063/1.1609198 |
0.652 |
|
2002 |
Voth GA, Bigger B, Buckley MR, Losert W, Brenner MP, Stone HA, Gollub JP. Ordered clusters and dynamical states of particles in a vibrated fluid. Physical Review Letters. 88: 234301. PMID 12059365 DOI: 10.1103/Physrevlett.88.234301 |
0.474 |
|
2002 |
Brenner MP, Hilgenfeldt S, Lohse D. Single-bubble sonoluminescence Reviews of Modern Physics. 74: 425-484. DOI: 10.1103/Revmodphys.74.425 |
0.449 |
|
2001 |
Betterton MD, Brenner MP. Collapsing bacterial cylinders. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 64: 061904. PMID 11736207 DOI: 10.1103/Physreve.64.061904 |
0.634 |
|
2001 |
Hohman MM, Shin M, Rutledge G, Brenner MP. Electrospinning and electrically forced jets. II. Applications Physics of Fluids. 13: 2221-2236. DOI: 10.1063/1.1384013 |
0.66 |
|
2001 |
Hohman MM, Shin M, Rutledge G, Brenner MP. Electrospinning and electrically forced jets. I. Stability theory Physics of Fluids. 13: 2201-2220. DOI: 10.1063/1.1383791 |
0.662 |
|
2001 |
Shin YM, Hohman MM, Brenner MP, Rutledge GC. Electrospinning: A whipping fluid jet generates submicron polymer fibers Applied Physics Letters. 78: 1149-1151. DOI: 10.1063/1.1345798 |
0.643 |
|
2001 |
Shin YM, Hohman MM, Brenner MP, Rutledge GC. Experimental characterization of electrospinning: The electrically forced jet and instabilities Polymer. 42: 9955-9967. DOI: 10.1016/S0032-3861(01)00540-7 |
0.65 |
|
2001 |
Betterton MD, Brenner MP. Collapsing bacterial cylinders Physical Review E - Statistical, Nonlinear, and Soft Matter Physics. 64: 061904/1-061904/15. |
0.565 |
|
2000 |
Squires TM, Brenner MP. Like-charge attraction and hydrodynamic interaction Physical Review Letters. 85: 4976-9. PMID 11102165 DOI: 10.1103/Physrevlett.85.4976 |
0.583 |
|
2000 |
Dufresne ER, Squires TM, Brenner MP, Grier DG. Hydrodynamic coupling of two brownian spheres to a planar surface. Physical Review Letters. 85: 3317-20. PMID 11019330 DOI: 10.1103/Physrevlett.85.3317 |
0.587 |
|
2000 |
Brenner MP. Fluid mechanics. Jets from a singular surface Nature. 403: 377-8. PMID 10667775 DOI: 10.1038/35000330 |
0.303 |
|
2000 |
Brenner MP, Stone HA. Modern Classical Physics Through the Work of G. I. Taylor Physics Today. 53: 30-35. DOI: 10.1063/1.883100 |
0.439 |
|
2000 |
Taketomi S, Brenner MP, Stone HA. Surface Instability Spikes Physics Today. 53: 14-14. DOI: 10.1063/1.1341906 |
0.41 |
|
1999 |
Betterton MD, Brenner MP. Electrostatic edge instability of lipid membranes Physical Review Letters. 82: 1598-1601. DOI: 10.1103/Physrevlett.82.1598 |
0.606 |
|
1999 |
Stone HA, Lister JR, Brenner MP. Drops with conical ends in electric and magnetic fields Proceedings of the Royal Society a: Mathematical, Physical and Engineering Sciences. 455: 329-347. DOI: 10.1098/Rspa.1999.0316 |
0.427 |
|
1999 |
Brenner MP, Constantin P, Kadanoff LP, Schenkel A, Venkataramani SC. Diffusion, attraction and collapse Nonlinearity. 12: 1071-1098. DOI: 10.1088/0951-7715/12/4/320 |
0.537 |
|
1999 |
Brenner MP. Screening mechanisms in sedimentation Physics of Fluids. 11: 754-772. DOI: 10.1063/1.869948 |
0.305 |
|
1998 |
Brenner MP, Hilgenfeldt S, Lohse D. Predictions for stable sonoluminescence in nonaqueous liquids The Journal of the Acoustical Society of America. 103: 3048-3048. DOI: 10.1121/1.422631 |
0.461 |
|
1998 |
Brenner MP, Dupont TF, Hilgenfeldt S, Lohse D. Brenneret al.Reply: Physical Review Letters. 80: 3668-3669. DOI: 10.1103/Physrevlett.80.3668 |
0.379 |
|
1998 |
Koehler S, Stone H, Brenner M, Eggers JG. Dynamics of foam drainage Physical Review E. 58: 2097-2106. DOI: 10.1103/Physreve.58.2097 |
0.46 |
|
1998 |
Brenner MP, Witelski TP. On spherically symmetric gravitational collapse Journal of Statistical Physics. 93: 863-899. DOI: 10.1023/B:Joss.0000033167.19114.B8 |
0.303 |
|
1998 |
Hilgenfeldt S, Brenner MP, Grossmann S, Lohse D. Analysis of Rayleigh-Plesset dynamics for sonoluminescing bubbles Journal of Fluid Mechanics. 365: 171-204. DOI: 10.1017/S0022112098001207 |
0.489 |
|
1997 |
Lohse D, Brenner MP, Dupont TF, Hilgenfeldt S, Johnston B. Sonoluminescing air bubbles rectify argon Physical Review Letters. 78: 1359-1366. DOI: 10.1103/Physrevlett.78.1359 |
0.442 |
|
1997 |
Hilgenfeldt S, Lohse D, Brenner MP. Erratum: “Phase diagrams for sonoluminescing bubbles” [Phys. Fluids 8, 2808 (1996)] Physics of Fluids. 9: 2462-2462. DOI: 10.1063/1.869523 |
0.429 |
|
1997 |
Brenner MP, Eggers J, Joseph K, Nagel SR, Shi XD. Breakdown of scaling in droplet fission at high Reynolds number Physics of Fluids. 9: 1573-1590. DOI: 10.1063/1.869279 |
0.333 |
|
1996 |
Brenner MP, Hilgenfeldt S, Lohse D, Rosales RR. Acoustic Energy Storage in Single Bubble Sonoluminescence. Physical Review Letters. 77: 3467-3470. PMID 10062227 DOI: 10.1103/Physrevlett.77.3467 |
0.44 |
|
1996 |
Brenner MP, Lohse D, Oxtoby D, Dupont TF. Mechanisms for stable single bubble sonoluminescence. Physical Review Letters. 76: 1158-1161. PMID 10061648 DOI: 10.1103/Physrevlett.76.1158 |
0.446 |
|
1996 |
Hilgenfeldt S, Lohse D, Brenner MP. Phase diagrams for sonoluminescing bubbles Physics of Fluids. 8: 2808-2826. DOI: 10.1063/1.869131 |
0.454 |
|
1996 |
Brenner MP, Lister JR, Stone HA. Pinching threads, singularities and the number 0.0304... Physics of Fluids. 8: 2827-2836. DOI: 10.1063/1.869086 |
0.429 |
|
1996 |
Stone HA, Brenner MP. Note on the capillary thread instability for fluids of equal viscosities Journal of Fluid Mechanics. 318: 373-374. DOI: 10.1017/S002211209600715X |
0.429 |
|
1995 |
Brenner MP, Lohse D, Dupont TF. Bubble shape oscillations and the onset of sonoluminescence. Physical Review Letters. 75: 954-957. PMID 10060160 DOI: 10.1103/Physrevlett.75.954 |
0.462 |
|
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