David A. Hendrix, PhD - Publications

Oregon State University, Corvallis, OR 

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Das PP, Hendrix DA, Apostolou E, Buchner AH, Canver MC, Beyaz S, Ljuboja D, Kuintzle R, Kim W, Karnik R, Shao Z, Xie H, Xu J, De Los Angeles A, Zhang Y, et al. PRC2 Is Required to Maintain Expression of the Maternal Gtl2-Rian-Mirg Locus by Preventing De Novo DNA Methylation in Mouse Embryonic Stem Cells. Cell Reports. 12: 1456-1470. PMID 26299972 DOI: 10.1016/j.celrep.2015.07.053  0.6
2013 Grote P, Wittler L, Hendrix D, Koch F, Währisch S, Beisaw A, Macura K, Bläss G, Kellis M, Werber M, Herrmann BG. The tissue-specific lncRNA Fendrr is an essential regulator of heart and body wall development in the mouse. Developmental Cell. 24: 206-14. PMID 23369715 DOI: 10.1016/j.devcel.2012.12.012  0.6
2012 Washietl S, Will S, Hendrix DA, Goff LA, Rinn JL, Berger B, Kellis M. Computational analysis of noncoding RNAs. Wiley Interdisciplinary Reviews. Rna. 3: 759-78. PMID 22991327 DOI: 10.1002/wrna.1134  0.6
2011 Hilgers V, Perry MW, Hendrix D, Stark A, Levine M, Haley B. Neural-specific elongation of 3′ UTRs during Drosophila development Proceedings of the National Academy of Sciences of the United States of America. 108: 15864-15869. PMID 21896737 DOI: 10.1073/pnas.1112672108  0.6
2011 Chopra VS, Hendrix DA, Core LJ, Tsui C, Lis JT, Levine M. The polycomb group mutant esc leads to augmented levels of paused Pol II in the Drosophila embryo. Molecular Cell. 42: 837-44. PMID 21700228 DOI: 10.1016/j.molcel.2011.05.009  0.6
2010 Hellsten U, Harland RM, Gilchrist MJ, Hendrix D, Jurka J, Kapitonov V, Ovcharenko I, Putnam NH, Shu S, Taher L, Blitz IL, Blumberg B, Dichmann DS, Dubchak I, Amaya E, et al. The genome of the Western clawed frog Xenopus tropicalis. Science (New York, N.Y.). 328: 633-6. PMID 20431018 DOI: 10.1126/science.1183670  0.6
2010 Hendrix D, Levine M, Shi W. MiRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data Genome Biology. 11. DOI: 10.1186/gb-2010-11-4-r39  0.6
2009 Shi W, Hendrix D, Levine M, Haley B. A distinct class of small RNAs arises from pre-miRNA-proximal regions in a simple chordate Nature Structural and Molecular Biology. 16: 183-189. PMID 19151725 DOI: 10.1038/nsmb.1536  0.6
2008 Hong JW, Hendrix DA, Papatsenko D, Levine MS. How the Dorsal gradient works: insights from postgenome technologies. Proceedings of the National Academy of Sciences of the United States of America. 105: 20072-6. PMID 19104040 DOI: 10.1073/pnas.0806476105  0.6
2008 Hong JW, Hendrix DA, Levine MS. Shadow enhancers as a source of evolutionary novelty. Science (New York, N.Y.). 321: 1314. PMID 18772429 DOI: 10.1126/science.1160631  0.6
2008 Haley B, Hendrix D, Trang V, Levine M. A simplified miRNA-based gene silencing method for Drosophila melanogaster Developmental Biology. 321: 482-490. PMID 18598689 DOI: 10.1016/j.ydbio.2008.06.015  0.6
2008 Hendrix DA, Hong JW, Zeitlinger J, Rokhsar DS, Levine MS. Promoter elements associated with RNA Pol II stalling in the Drosophila embryo. Proceedings of the National Academy of Sciences of the United States of America. 105: 7762-7. PMID 18505835 DOI: 10.1073/pnas.0802406105  0.6
2005 Mahony S, Hendrix D, Golden A, Smith TJ, Rokhsar DS. Transcription factor binding site identification using the self-organizing map. Bioinformatics (Oxford, England). 21: 1807-14. PMID 15647296 DOI: 10.1093/bioinformatics/bti256  0.6
2005 Mahony S, Hendrix D, Smith TJ, Golden A. Self-organizing maps of position weight matrices for motif discovery in biological sequences Artificial Intelligence Review. 24: 397-413. DOI: 10.1007/s10462-005-9011-9  0.6
2001 Hendrix DA, Jarzynski C. A "fast growth" method of computing free energy differences Journal of Chemical Physics. 114: 5974-5981. DOI: 10.1063/1.1353552  0.6
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