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Matthew T. Maurano, Ph.D. - Publications

Affiliations: 
2013 Genome Sciences University of Washington, Seattle, Seattle, WA 
Area:
Genetics, Molecular Biology
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Camellato BR, Brosh R, Ashe HJ, Maurano MT, Boeke JD. Synthetic reversed sequences reveal default genomic states. Nature. PMID 38448583 DOI: 10.1038/s41586-024-07128-2  0.428
2024 Xia B, Zhang W, Zhao G, Zhang X, Bai J, Brosh R, Wudzinska A, Huang E, Ashe H, Ellis G, Pour M, Zhao Y, Coelho C, Zhu Y, Miller A, ... ... Maurano MT, et al. On the genetic basis of tail-loss evolution in humans and apes. Nature. 626: 1042-1048. PMID 38418917 DOI: 10.1038/s41586-024-07095-8  0.306
2023 Zhang W, Golynker I, Brosh R, Fajardo A, Zhu Y, Wudzinska AM, Ordoñez R, Ribeiro-Dos-Santos AM, Carrau L, Damani-Yokota P, Yeung ST, Khairallah C, Vela Gartner A, Chalhoub N, Huang E, ... ... Maurano MT, et al. Mouse genome rewriting and tailoring of three important disease loci. Nature. PMID 37914927 DOI: 10.1038/s41586-023-06675-4  0.406
2023 Ordoñez R, Zhang W, Ellis G, Zhu Y, Ashe HJ, Ribeiro-Dos-Santos AM, Brosh R, Huang E, Hogan MS, Boeke JD, Maurano MT. Genomic context sensitizes regulatory elements to genetic disruption. Biorxiv : the Preprint Server For Biology. PMID 37781588 DOI: 10.1101/2023.07.02.547201  0.411
2023 Brosh R, Coelho C, Ribeiro-Dos-Santos AM, Ellis G, Hogan MS, Ashe HJ, Somogyi N, Ordoñez R, Luther RD, Huang E, Boeke JD, Maurano MT. Synthetic regulatory genomics uncovers enhancer context dependence at the Sox2 locus. Molecular Cell. PMID 36931273 DOI: 10.1016/j.molcel.2023.02.027  0.455
2022 Zhang W, Brosh R, McCulloch LH, Zhu Y, Ashe H, Ellis G, Camellato BR, Kim SY, Maurano MT, Boeke JD. A conditional counterselectable knockout in mouse embryonic stem cells for advanced genome writing applications. Iscience. 25: 104438. PMID 35692632 DOI: 10.1016/j.isci.2022.104438  0.301
2022 Ribeiro-Dos-Santos AM, Hogan MS, Luther RD, Brosh R, Maurano MT. Genomic context sensitivity of insulator function. Genome Research. 32: 425-436. PMID 35082140 DOI: 10.1101/gr.276449.121  0.401
2021 Halow JM, Byron R, Hogan MS, Ordoñez R, Groudine M, Bender MA, Stamatoyannopoulos JA, Maurano MT. Tissue context determines the penetrance of regulatory DNA variation. Nature Communications. 12: 2850. PMID 33990600 DOI: 10.1038/s41467-021-23139-3  0.673
2021 Mitchell LA, McCulloch LH, Pinglay S, Berger H, Bosco N, Brosh R, Bulajić M, Huang E, Hogan MS, Martin JA, Mazzoni EO, Davoli T, Maurano MT, Boeke JD. De novo assembly and delivery to mouse cells of a 101 kb functional human gene. Genetics. PMID 33742653 DOI: 10.1093/genetics/iyab038  0.378
2021 Brosh R, Laurent JM, Ordoñez R, Huang E, Hogan MS, Hitchcock AM, Mitchell LA, Pinglay S, Cadley JA, Luther RD, Truong DM, Boeke JD, Maurano MT. A versatile platform for locus-scale genome rewriting and verification. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33649239 DOI: 10.1073/pnas.2023952118  0.406
2019 Laurent JM, Fu X, German S, Maurano MT, Zhang K, Boeke JD. Big DNA as a tool to dissect an age-related macular degeneration-associated haplotype. Precision Clinical Medicine. 2: 1-7. PMID 30944767 DOI: 10.1093/Pcmedi/Pby019  0.427
2018 Morris JA, Kemp JP, Youlten SE, Laurent L, Logan JG, Chai RC, Vulpescu NA, Forgetta V, Kleinman A, Mohanty ST, Sergio CM, Quinn J, Nguyen-Yamamoto L, Luco AL, Vijay J, ... ... Maurano MT, et al. An atlas of genetic influences on osteoporosis in humans and mice. Nature Genetics. PMID 30598549 DOI: 10.1038/S41588-018-0302-X  0.369
2018 Wang X, Zhou T, Wunderlich Z, Maurano MT, DePace AH, Nuzhdin SV, Rohs R. Analysis of Genetic Variation Indicates DNA Shape Involvement in Purifying Selection. Molecular Biology and Evolution. PMID 29850830 DOI: 10.1093/Molbev/Msy099  0.487
2017 Kemp JP, Morris JA, Medina-Gomez C, Forgetta V, Warrington NM, Youlten SE, Zheng J, Gregson CL, Grundberg E, Trajanoska K, Logan JG, Pollard AS, Sparkes PC, Ghirardello EJ, Allen R, ... ... Maurano MT, et al. Identification of 153 new loci associated with heel bone mineral density and functional involvement of GPC6 in osteoporosis. Nature Genetics. PMID 28869591 DOI: 10.1038/Ng.3949  0.423
2017 Medina-Gomez C, Kemp JP, Dimou NL, Kreiner E, Chesi A, Zemel BS, Bønnelykke K, Boer CG, Ahluwalia TS, Bisgaard H, Evangelou E, Heppe DHM, Bonewald LF, Gorski JP, Ghanbari M, ... ... Maurano MT, et al. Bivariate genome-wide association meta-analysis of pediatric musculoskeletal traits reveals pleiotropic effects at the SREBF1/TOM1L2 locus. Nature Communications. 8: 121. PMID 28743860 DOI: 10.1038/S41467-017-00108-3  0.322
2016 Chen L, Ge B, Casale FP, Vasquez L, Kwan T, Garrido-Martín D, Watt S, Yan Y, Kundu K, Ecker S, Datta A, Richardson D, Burden F, Mead D, Mann AL, ... ... Maurano MT, et al. Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells. Cell. 167: 1398-1414.e24. PMID 27863251 DOI: 10.1016/J.Cell.2016.10.026  0.448
2016 van der Harst P, van Setten J, Verweij N, Vogler G, Franke L, Maurano MT, Wang X, Mateo Leach I, Eijgelsheim M, Sotoodehnia N, Hayward C, Sorice R, Meirelles O, Lyytikäinen LP, Polašek O, et al. 52 Genetic Loci Influencing Myocardial Mass. Journal of the American College of Cardiology. 68: 1435-48. PMID 27659466 DOI: 10.1016/J.Jacc.2016.07.729  0.482
2016 Boeke JD, Church G, Hessel A, Kelley NJ, Arkin A, Cai Y, Carlson R, Chakravarti A, Cornish VW, Holt L, Isaacs FJ, Kuiken T, Lajoie M, Lessor T, Lunshof J, ... Maurano MT, et al. The Genome Project-Write. Science (New York, N.Y.). PMID 27256881 DOI: 10.1126/Science.Aaf6850  0.368
2016 Maurano MT, Haugen E, Sandstrom R, Vierstra J, Shafer A, Kaul R, Stamatoyannopoulos JA. Erratum: Large-scale identification of sequence variants influencing human transcription factor occupancy in vivo. Nature Genetics. 48: 101. PMID 26711113 DOI: 10.1038/ng0116-101c  0.578
2015 Maurano MT, Stamatoyannopoulos JA. Taking Stock of Regulatory Variation. Cell Systems. 1: 18-21. PMID 27135686 DOI: 10.1016/J.Cels.2015.07.011  0.582
2015 Maurano MT, Haugen E, Sandstrom R, Vierstra J, Shafer A, Kaul R, Stamatoyannopoulos JA. Large-scale identification of sequence variants influencing human transcription factor occupancy in vivo. Nature Genetics. PMID 26502339 DOI: 10.1038/Ng.3432  0.703
2015 Zheng HF, Forgetta V, Hsu YH, Estrada K, Rosello-Diez A, Leo PJ, Dahia CL, Park-Min KH, Tobias JH, Kooperberg C, Kleinman A, Styrkarsdottir U, Liu CT, Uggla C, Evans DS, ... ... Maurano MT, et al. Whole-genome sequencing identifies EN1 as a determinant of bone density and fracture. Nature. PMID 26367794 DOI: 10.1038/Nature14878  0.411
2015 Maurano MT, Wang H, John S, Shafer A, Canfield T, Lee K, Stamatoyannopoulos JA. Role of DNA Methylation in Modulating Transcription Factor Occupancy. Cell Reports. PMID 26257180 DOI: 10.1016/J.Celrep.2015.07.024  0.642
2015 Liu M, Maurano MT, Wang H, Qi H, Song CZ, Navas PA, Emery DW, Stamatoyannopoulos JA, Stamatoyannopoulos G. Genomic discovery of potent chromatin insulators for human gene therapy. Nature Biotechnology. 33: 198-203. PMID 25580597 DOI: 10.1038/Nbt.3062  0.622
2013 Maurano MT, Wang H, Shafer A, John S, Stamatoyannopoulos JA. DNA methylation alone does not cause most cell-type selective transcription factor binding Epigenetics & Chromatin. 6. DOI: 10.1186/1756-8935-6-S1-P103  0.67
2012 Vernot B, Stergachis AB, Maurano MT, Vierstra J, Neph S, Thurman RE, Stamatoyannopoulos JA, Akey JM. Personal and population genomics of human regulatory variation. Genome Research. 22: 1689-97. PMID 22955981 DOI: 10.1101/Gr.134890.111  0.702
2012 Wang H, Maurano MT, Qu H, Varley KE, Gertz J, Pauli F, Lee K, Canfield T, Weaver M, Sandstrom R, Thurman RE, Kaul R, Myers RM, Stamatoyannopoulos JA. Widespread plasticity in CTCF occupancy linked to DNA methylation. Genome Research. 22: 1680-8. PMID 22955980 DOI: 10.1101/Gr.136101.111  0.698
2012 Maurano MT, Humbert R, Rynes E, Thurman RE, Haugen E, Wang H, Reynolds AP, Sandstrom R, Qu H, Brody J, Shafer A, Neri F, Lee K, Kutyavin T, Stehling-Sun S, et al. Systematic localization of common disease-associated variation in regulatory DNA. Science (New York, N.Y.). 337: 1190-5. PMID 22955828 DOI: 10.1126/Science.1222794  0.648
2012 Neph S, Vierstra J, Stergachis AB, Reynolds AP, Haugen E, Vernot B, Thurman RE, John S, Sandstrom R, Johnson AK, Maurano MT, Humbert R, Rynes E, Wang H, Vong S, et al. An expansive human regulatory lexicon encoded in transcription factor footprints. Nature. 489: 83-90. PMID 22955618 DOI: 10.1038/Nature11212  0.711
2012 Thurman RE, Rynes E, Humbert R, Vierstra J, Maurano MT, Haugen E, Sheffield NC, Stergachis AB, Wang H, Vernot B, Garg K, John S, Sandstrom R, Bates D, Boatman L, et al. The accessible chromatin landscape of the human genome. Nature. 489: 75-82. PMID 22955617 DOI: 10.1038/Nature11232  0.672
2012 Neph S, Kuehn MS, Reynolds AP, Haugen E, Thurman RE, Johnson AK, Rynes E, Maurano MT, Vierstra J, Thomas S, Sandstrom R, Humbert R, Stamatoyannopoulos JA. BEDOPS: high-performance genomic feature operations. Bioinformatics (Oxford, England). 28: 1919-20. PMID 22576172 DOI: 10.1093/Bioinformatics/Bts277  0.571
2012 Maurano MT, Wang H, Kutyavin T, Stamatoyannopoulos JA. Widespread site-dependent buffering of human regulatory polymorphism. Plos Genetics. 8: e1002599. PMID 22457641 DOI: 10.1371/Journal.Pgen.1002599  0.693
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