Year |
Citation |
Score |
2023 |
Li Z, Xue AZ, Maeda GP, Li Y, Nabity PD, Moran NA. Phylloxera and aphids show distinct features of genome evolution despite similar reproductive modes. Molecular Biology and Evolution. PMID 38069672 DOI: 10.1093/molbev/msad271 |
0.407 |
|
2023 |
Li H, Zhu L, Fan R, Li Z, Liu Y, Shaheen A, Nie F, Li C, Liu X, Li Y, Liu W, Yang Y, Guo T, Zhu Y, Bu M, et al. A platform for whole-genome speed introgression from Aegilops tauschii to wheat for breeding future crops. Nature Protocols. PMID 38017137 DOI: 10.1038/s41596-023-00922-8 |
0.439 |
|
2023 |
Li Z, Xue AZ, Maeda GP, Li Y, Nabity PD, Moran NA. Phylloxera and aphids show distinct features of genome evolution despite similar reproductive modes. Biorxiv : the Preprint Server For Biology. PMID 37693541 DOI: 10.1101/2023.08.28.555181 |
0.407 |
|
2023 |
Yang L, Harris AJ, Wen F, Li Z, Feng C, Kong H, Kang M. Phylogenomic Analyses Reveal an Allopolyploid Origin of Core Didymocarpinae (Gesneriaceae) Followed by Rapid Radiation. Systematic Biology. PMID 37158589 DOI: 10.1093/sysbio/syad029 |
0.794 |
|
2023 |
Hoang NV, Sogbohossou EOD, Xiong W, Simpson CJC, Singh P, Walden N, van den Bergh E, Becker FFM, Li Z, Zhu XG, Brautigam A, Weber APM, van Haarst JC, Schijlen EGWM, Hendre PS, et al. The Gynandropsis gynandra genome provides insights into whole-genome duplications and the evolution of C4 photosynthesis in Cleomaceae. The Plant Cell. PMID 36691724 DOI: 10.1093/plcell/koad018 |
0.393 |
|
2023 |
Li Z, Zhong Z, Wu Z, Pausch P, Al-Shayeb B, Amerasekera J, Doudna JA, Jacobsen SE. Genome editing in plants using the compact editor CasΦ. Proceedings of the National Academy of Sciences of the United States of America. 120: e2216822120. PMID 36652483 DOI: 10.1073/pnas.2216822120 |
0.441 |
|
2022 |
Yu XQ, Su W, Zhang H, Niu M, Liu X, Li Z, Liu C, Wang HL, Yin W, Xia X. Genome-wide analysis of autophagy-related gene family and PagATG18a enhances salt tolerance by regulating ROS homeostasis in poplar. International Journal of Biological Macromolecules. PMID 36441079 DOI: 10.1016/j.ijbiomac.2022.10.240 |
0.303 |
|
2022 |
Huang R, Li Z, Shen X, Choi J, Cao Y. The Perspective of Arbuscular Mycorrhizal Symbiosis in Rice Domestication and Breeding. International Journal of Molecular Sciences. 23. PMID 36293238 DOI: 10.3390/ijms232012383 |
0.352 |
|
2022 |
Li Z, Henawy AR, Halema AA, Fan Q, Duanmu D, Huang R. A Wild Rice Rhizobacterium BRDJ Enhances Nitrogen Use Efficiency in Rice. International Journal of Molecular Sciences. 23. PMID 36142689 DOI: 10.3390/ijms231810769 |
0.325 |
|
2022 |
Qiao Y, Zhang X, Li Z, Song Y, Sun Z. Assembly and comparative analysis of the complete mitochondrial genome of Bupleurum chinense DC. Bmc Genomics. 23: 664. PMID 36131243 DOI: 10.1186/s12864-022-08892-z |
0.358 |
|
2022 |
Marchant DB, Chen G, Cai S, Chen F, Schafran P, Jenkins J, Shu S, Plott C, Webber J, Lovell JT, He G, Sandor L, Williams M, Rajasekar S, Healey A, ... ... Li Z, et al. Dynamic genome evolution in a model fern. Nature Plants. PMID 36050461 DOI: 10.1038/s41477-022-01226-7 |
0.817 |
|
2022 |
Li Z, Li Y, Xue AZ, Dang V, Renee Holmes V, Spencer Johnston J, Barrick JE, Moran NA. The genomic basis of evolutionary novelties in a leafhopper. Molecular Biology and Evolution. PMID 36026509 DOI: 10.1093/molbev/msac184 |
0.404 |
|
2022 |
Peng L, Li P, Li H, Zhao W, Wang H, Li Z, Sun L. Sequencing and analysis of the complete mitochondrial genome of . Mitochondrial Dna. Part B, Resources. 7: 873-874. PMID 35692706 DOI: 10.1080/23802359.2022.2076625 |
0.303 |
|
2022 |
Heckenhauer J, Frandsen PB, Sproul JS, Li Z, Paule J, Larracuente AM, Maughan PJ, Barker MS, Schneider JV, Stewart RJ, Pauls SU. Genome size evolution in the diverse insect order Trichoptera. Gigascience. 11. PMID 35217860 DOI: 10.1093/gigascience/giac011 |
0.728 |
|
2022 |
Jarvis DE, Maughan PJ, DeTemple J, Mosquera V, Li Z, Barker MS, Johnson LA, Whipple CJ. Chromosome-scale genome assembly of Gilia yorkii enables genetic mapping of floral traits in an inter-species cross. Genome Biology and Evolution. PMID 35106544 DOI: 10.1093/gbe/evac017 |
0.711 |
|
2021 |
Wang C, Zhang Y, Ding H, Song M, Yin J, Yu H, Li Z, Han L, Zhang Z. Authentication of Species Based on Analysis of Metabolite Profiles. Frontiers in Plant Science. 12: 705446. PMID 34880881 DOI: 10.3389/fpls.2021.705446 |
0.306 |
|
2021 |
Lu RS, Chen Y, Zhang XY, Feng Y, Comes HP, Li Z, Zheng ZS, Yuan Y, Wang LY, Huang ZJ, Guo Y, Sun GP, Olsen KM, Chen J, Qiu YX. Genome sequencing and transcriptome analyses provide insights into the origin and domestication of water caltrop (Trapa spp., Lythraceae). Plant Biotechnology Journal. PMID 34861095 DOI: 10.1111/pbi.13758 |
0.433 |
|
2021 |
Wickell D, Kuo LY, Yang HP, Dhabalia Ashok A, Irisarri I, Dadras A, de Vries S, de Vries J, Huang YM, Li Z, Barker MS, Hartwick NT, Michael TP, Li FW. Underwater CAM photosynthesis elucidated by Isoetes genome. Nature Communications. 12: 6348. PMID 34732722 DOI: 10.1038/s41467-021-26644-7 |
0.739 |
|
2021 |
He J, Li F, Yan X, Cheng Q, Xue R, Yu H, Wang CH, Li Z. Phytochemical Constituents and Biological Activities of Plants from the Genus Cissampelos. Chemistry & Biodiversity. PMID 34387021 DOI: 10.1002/cbdv.202100358 |
0.302 |
|
2021 |
Wang X, Gao Y, Wu X, Wen X, Li D, Zhou H, Li Z, Liu B, Wei J, Chen F, Chen F, Zhang C, Zhang L, Xia Y. High-quality evergreen azalea genome reveals tandem duplication-facilitated low-altitude adaptability and floral scent evolution. Plant Biotechnology Journal. PMID 34375461 DOI: 10.1111/pbi.13680 |
0.403 |
|
2021 |
Pan G, Li Z, Huang S, Tao J, Shi Y, Chen A, Li J, Tang H, Chang L, Deng Y, Li D, Zhao L. Genome-wide development of insertion-deletion (InDel) markers for Cannabis and its uses in genetic structure analysis of Chinese germplasm and sex-linked marker identification. Bmc Genomics. 22: 595. PMID 34353285 DOI: 10.1186/s12864-021-07883-w |
0.373 |
|
2021 |
Liu Y, Wang B, Shu S, Li Z, Song C, Liu D, Niu Y, Liu J, Zhang J, Liu H, Hu Z, Huang B, Liu X, Liu W, Jiang L, et al. Analysis of the Coptis chinensis genome reveals the diversification of protoberberine-type alkaloids. Nature Communications. 12: 3276. PMID 34078898 DOI: 10.1038/s41467-021-23611-0 |
0.729 |
|
2021 |
Pan G, Li Z, Yin M, Huang S, Tao J, Chen A, Li J, Tang H, Chang L, Deng Y, Li D, Zhao L. Genome-wide identification, expression, and sequence analysis of CONSTANS-like gene family in cannabis reveals a potential role in plant flowering time regulation. Bmc Plant Biology. 21: 142. PMID 33731002 DOI: 10.1186/s12870-021-02913-x |
0.386 |
|
2021 |
Li Z, McKibben MTW, Finch GS, Blischak PD, Sutherland BL, Barker MS. Patterns and Processes of Diploidization in Land Plants. Annual Review of Plant Biology. PMID 33684297 DOI: 10.1146/annurev-arplant-050718-100344 |
0.693 |
|
2021 |
Marx HE, Jorgensen SA, Wisely E, Li Z, Dlugosch KM, Barker MS. Pilot RNA-seq data from 24 species of vascular plants at Harvard Forest. Applications in Plant Sciences. 9: e11409. PMID 33680580 DOI: 10.1002/aps3.11409 |
0.734 |
|
2020 |
Yu H, Yang J, Cui H, Li Z, Jia F, Chen J, Li X. Effects of plant density on tillering in the weed grass Aegilops tauschii Coss. and its phytohormonal regulation. Plant Physiology and Biochemistry : Ppb. 157: 70-78. PMID 33091798 DOI: 10.1016/j.plaphy.2020.10.013 |
0.318 |
|
2020 |
Li Y, Song Q, Zhang Y, Li Z, Guo J, Chen X, Zhang G. Genome-wide identification, characterization, and expression patterns analysis of the SBP-box gene family in wheat (Triticum aestivum L.). Scientific Reports. 10: 17250. PMID 33057145 DOI: 10.1038/s41598-020-74417-x |
0.312 |
|
2020 |
Zhu XY, Shen CZ, Liu YF, Chen L, Li Z, He ZQ. A new species of Goniurosaurus from Hainan Island, China based on molecular and morphological data (Squamata: Sauria: Eublepharidae). Zootaxa. 4772: zootaxa.4772.2.6. PMID 33055616 DOI: 10.11646/Zootaxa.4772.2.6 |
0.303 |
|
2020 |
Pausch P, Al-Shayeb B, Bisom-Rapp E, Tsuchida CA, Li Z, Cress BF, Knott GJ, Jacobsen SE, Banfield JF, Doudna JA. CRISPR-CasΦ from huge phages is a hypercompact genome editor. Science (New York, N.Y.). 369: 333-337. PMID 32675376 DOI: 10.1126/Science.Abb1400 |
0.326 |
|
2020 |
Lv Q, Qiu J, Liu J, Li Z, Zhang W, Wang Q, Fang J, Pan J, Chen Z, Cheng W, Barker MS, Huang X, Wei X, Cheng K. The Chimonanthus salicifolius genome provides insight into magnoliids evolution and flavonoids biosynthesis. The Plant Journal : For Cell and Molecular Biology. PMID 32524692 DOI: 10.1111/Tpj.14874 |
0.754 |
|
2020 |
Li Z, Han Y, Niu H, Wang Y, Jiang B, Weng Y. Gynoecy instability in cucumber ( L.) is due to unequal crossover at the copy number variation-dependent () locus. Horticulture Research. 7: 32. PMID 32194968 DOI: 10.1038/s41438-020-0251-2 |
0.369 |
|
2020 |
Li FW, Nishiyama T, Waller M, Frangedakis E, Keller J, Li Z, Fernandez-Pozo N, Barker MS, Bennett T, Blázquez MA, Cheng S, Cuming AC, de Vries J, de Vries S, Delaux PM, et al. Anthoceros genomes illuminate the origin of land plants and the unique biology of hornworts. Nature Plants. 6: 259-272. PMID 32170292 DOI: 10.1038/S41477-020-0618-2 |
0.797 |
|
2020 |
Li Z, Liu D, Xia Y, Li Z, Jing D, Du J, Niu N, Ma S, Wang J, Song Y, Yang Z, Zhang G. Identification of the WUSCHEL-Related Homeobox (WOX) Gene Family, and Interaction and Functional Analysis of TaWOX9 and TaWUS in Wheat. International Journal of Molecular Sciences. 21. PMID 32111029 DOI: 10.3390/ijms21051581 |
0.387 |
|
2020 |
Li Z, Barker MS. Inferring putative ancient whole-genome duplications in the 1000 Plants (1KP) initiative: access to gene family phylogenies and age distributions. Gigascience. 9. PMID 32043527 DOI: 10.1093/Gigascience/Giaa004 |
0.753 |
|
2019 |
Li Z, Liu D, Xia Y, Li Z, Niu N, Ma S, Wang J, Song Y, Zhang G. Identification and Functional Analysis of the CLAVATA3/EMBRYO SURROUNDING REGION (CLE) Gene Family in Wheat. International Journal of Molecular Sciences. 20. PMID 31484454 DOI: 10.3390/ijms20174319 |
0.307 |
|
2019 |
Li Z, Tiley GP, Rundell RJ, Barker MS. Reply to Nakatani and McLysaght: Analyzing deep duplication events. Proceedings of the National Academy of Sciences of the United States of America. PMID 30674658 DOI: 10.1073/Pnas.1819227116 |
0.799 |
|
2018 |
Li FW, Brouwer P, Carretero-Paulet L, Cheng S, de Vries J, Delaux PM, Eily A, Koppers N, Kuo LY, Li Z, Simenc M, Small I, Wafula E, Angarita S, Barker MS, et al. Fern genomes elucidate land plant evolution and cyanobacterial symbioses. Nature Plants. PMID 29967517 DOI: 10.1038/S41477-018-0188-8 |
0.79 |
|
2018 |
Landis JB, Soltis DE, Li Z, Marx HE, Barker MS, Tank DC, Soltis PS. Impact of whole-genome duplication events on diversification rates in angiosperms. American Journal of Botany. PMID 29719043 DOI: 10.1002/Ajb2.1060 |
0.826 |
|
2018 |
Li Z, Tiley GP, Galuska SR, Reardon CR, Kidder TI, Rundell RJ, Barker MS. Multiple large-scale gene and genome duplications during the evolution of hexapods. Proceedings of the National Academy of Sciences of the United States of America. PMID 29674453 DOI: 10.1073/Pnas.1710791115 |
0.835 |
|
2017 |
Mandáková T, Li Z, Barker MS, Lysak MA. Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention. The Plant Journal : For Cell and Molecular Biology. PMID 28370611 DOI: 10.1111/Tpj.13553 |
0.776 |
|
2017 |
Sun Z, Li Z, Huang J, Zheng B, Zhang L, Wang Z. Genome-wide comparative analysis of LEAFY promoter sequence in angiosperms. Physiology and Molecular Biology of Plants : An International Journal of Functional Plant Biology. 23: 23-33. PMID 28250581 DOI: 10.1007/s12298-016-0393-8 |
0.347 |
|
2016 |
Barker MS, Li Z, Kidder TI, Reardon CR, Lai Z, Oliveira LO, Scascitelli M, Rieseberg LH. Most Compositae (Asteraceae) are descendants of a paleohexaploid and all share a paleotetraploid ancestor with the Calyceraceae. American Journal of Botany. PMID 27313199 DOI: 10.3732/Ajb.1600113 |
0.729 |
|
2015 |
Li Z, Baniaga AE, Sessa EB, Scascitelli M, Graham SW, Rieseberg LH, Barker MS. Early genome duplications in conifers and other seed plants. Science Advances. 1: e1501084. PMID 26702445 DOI: 10.1126/Sciadv.1501084 |
0.806 |
|
2015 |
Barker MS, Arrigo N, Baniaga AE, Li Z, Levin DA. On the relative abundance of autopolyploids and allopolyploids. The New Phytologist. PMID 26439879 DOI: 10.1111/Nph.13698 |
0.715 |
|
2015 |
Huang N, Wen Y, Guo X, Li Z, Dai J, Ni B, Yu J, Lin Y, Zhou W, Yao B, Jiang Y, Sha J, Conrad DF, Hu Z. A Screen for Genomic Disorders of Infertility Identifies MAST2 Duplications Associated with Non-Obstructive Azoospermia in Humans. Biology of Reproduction. PMID 26203179 DOI: 10.1095/Biolreprod.115.131185 |
0.377 |
|
Show low-probability matches. |