| Year |
Citation |
Score |
| 2019 |
Mondal M, Bhattacharyya D, Gao YQ. Structural properties and influence of solvent on the stability of telomeric four-stranded i-motif DNA. Physical Chemistry Chemical Physics : Pccp. PMID 31536074 DOI: 10.1039/c9cp03253c |
0.341 |
|
| 2018 |
Halder A, Roy R, Bhattacharyya D, Mitra A. Consequences of Mg binding on the geometry and stability of RNA base pairs. Physical Chemistry Chemical Physics : Pccp. PMID 30088497 DOI: 10.1039/c8cp03602k |
0.363 |
|
| 2017 |
Ray A, Agarwal A, Bhattacharyya D. Effect of single-residue bulges on RNA double-helical structures: crystallographic database analysis and molecular dynamics simulation studies. Journal of Molecular Modeling. 23: 311. PMID 29032448 DOI: 10.1007/s00894-017-3480-z |
0.356 |
|
| 2017 |
Mukherjee D, Bhattacharyya D. Intrinsic structural variability in GNRA-like tetraloops: insight from molecular dynamics simulation. Journal of Molecular Modeling. 23: 300. PMID 28965269 DOI: 10.1007/s00894-017-3470-1 |
0.357 |
|
| 2016 |
Bhattacharyya D, Mirihana Arachchilage G, Basu S. Metal Cations in G-Quadruplex Folding and Stability. Frontiers in Chemistry. 4: 38. PMID 27668212 DOI: 10.3389/Fchem.2016.00038 |
0.487 |
|
| 2015 |
Bhattacharya S, Mittal S, Panigrahi S, Sharma P, S P P, Paul R, Halder S, Halder A, Bhattacharyya D, Mitra A. RNABP COGEST: a resource for investigating functional RNAs. Database : the Journal of Biological Databases and Curation. 2015. PMID 25776022 DOI: 10.1093/database/bav011 |
0.345 |
|
| 2015 |
Bhattacharyya D, Diamond P, Basu S. An Independently folding RNA G-quadruplex domain directly recruits the 40S ribosomal subunit. Biochemistry. 54: 1879-85. PMID 25730526 DOI: 10.1021/Acs.Biochem.5B00091 |
0.492 |
|
| 2015 |
Mondal M, Mukherjee S, Halder S, Bhattacharyya D. Stacking geometry for non-canonical G:U wobble base pair containing dinucleotide sequences in RNA: dispersion-corrected DFT-D study. Biopolymers. 103: 328-38. PMID 25652776 DOI: 10.1002/bip.22616 |
0.392 |
|
| 2015 |
Mukherjee S, Kailasam S, Bansal M, Bhattacharyya D. Stacking interactions in RNA and DNA: Roll-slide energy hyperspace for ten unique dinucleotide steps. Biopolymers. 103: 134-47. PMID 25257334 DOI: 10.1002/Bip.22566 |
0.306 |
|
| 2014 |
Bhattacharyya D, Nguyen K, Basu S. Rationally induced RNA:DNA G-quadruplex structures elicit an anticancer effect by inhibiting endogenous eIF-4E expression. Biochemistry. 53: 5461-70. PMID 25072107 DOI: 10.1021/Bi5008904 |
0.485 |
|
| 2014 |
Kailasam S, Bhattacharyya D, Bansal M. Sequence dependent variations in RNA duplex are related to non-canonical hydrogen bond interactions in dinucleotide steps. Bmc Research Notes. 7: 83. PMID 24502340 DOI: 10.1186/1756-0500-7-83 |
0.385 |
|
| 2013 |
Halder S, Bhattacharyya D. RNA structure and dynamics: a base pairing perspective. Progress in Biophysics and Molecular Biology. 113: 264-83. PMID 23891726 DOI: 10.1016/j.pbiomolbio.2013.07.003 |
0.367 |
|
| 2012 |
Ray SS, Halder S, Kaypee S, Bhattacharyya D. HD-RNAS: An Automated Hierarchical Database of RNA Structures. Frontiers in Genetics. 3: 59. PMID 22529851 DOI: 10.3389/fgene.2012.00059 |
0.333 |
|
| 2012 |
Halder S, Bhattacharyya D. Structural variations of single and tandem mismatches in RNA duplexes: A joint MD simulation and crystal structure database analysis Journal of Physical Chemistry B. 116: 11845-11856. DOI: 10.1021/jp305628v |
0.318 |
|
| 2010 |
Sharma P, Sponer JE, Sponer J, Sharma S, Bhattacharyya D, Mitra A. On the role of the cis Hoogsteen:sugar-edge family of base pairs in platforms and triplets-quantum chemical insights into RNA structural biology. The Journal of Physical Chemistry. B. 114: 3307-20. PMID 20163171 DOI: 10.1021/jp910226e |
0.319 |
|
| 2010 |
Halder S, Bhattacharyya D. Structural stability of tandemly occurring noncanonical basepairs within double helical fragments: Molecular dynamics studies of functional RNA Journal of Physical Chemistry B. 114: 14028-14040. DOI: 10.1021/jp102835t |
0.326 |
|
| 2008 |
Sharma P, Mitra A, Sharma S, Singh H, Bhattacharyya D. Quantum chemical studies of structures and binding in noncanonical RNA base pairs: the trans Watson-Crick:Watson-Crick family. Journal of Biomolecular Structure & Dynamics. 25: 709-32. PMID 18399704 DOI: 10.1080/07391102.2008.10507216 |
0.313 |
|
| 2006 |
Mukherjee S, Bansal M, Bhattacharyya D. Conformational specificity of non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysis. Journal of Computer-Aided Molecular Design. 20: 629-45. PMID 17124630 DOI: 10.1007/S10822-006-9083-X |
0.305 |
|
| 2006 |
Das J, Mukherjee S, Mitra A, Bhattacharyya D. Non-canonical base pairs and higher order structures in nucleic acids: crystal structure database analysis. Journal of Biomolecular Structure & Dynamics. 24: 149-61. PMID 16928138 DOI: 10.1080/07391102.2006.10507108 |
0.347 |
|
| 1995 |
Bansal M, Bhattacharyya D, Ravi B. NUPARM and NUCGEN: software for analysis and generation of sequence dependent nucleic acid structures. Computer Applications in the Biosciences : Cabios. 11: 281-7. PMID 7583696 DOI: 10.1093/Bioinformatics/11.3.281 |
0.323 |
|
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