| Year |
Citation |
Score |
| 2024 |
Niarakis A, Ostaszewski M, Mazein A, Kuperstein I, Kutmon M, Gillespie ME, Funahashi A, Acencio ML, Hemedan A, Aichem M, Klein K, Czauderna T, Burtscher F, Yamada TG, Hiki Y, ... ... Barillot E, et al. Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches. Frontiers in Immunology. 14: 1282859. PMID 38414974 DOI: 10.3389/fimmu.2023.1282859 |
0.777 |
|
| 2023 |
Ponce-de-Leon M, Montagud A, Noël V, Meert A, Pradas G, Barillot E, Calzone L, Valencia A. PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks. Npj Systems Biology and Applications. 9: 54. PMID 37903760 DOI: 10.1038/s41540-023-00314-4 |
0.815 |
|
| 2023 |
Ruscone M, Montagud A, Chavrier P, Destaing O, Bonnet I, Zinovyev A, Barillot E, Noël V, Calzone L. Multiscale model of the different modes of cancer cell invasion. Bioinformatics (Oxford, England). PMID 37289551 DOI: 10.1093/bioinformatics/btad374 |
0.801 |
|
| 2023 |
Calzone L, Noël V, Barillot E, Kroemer G, Stoll G. Corrigendum to "Modeling signaling pathways in biology with MaBoSS: From one single cell to a dynamic population of heterogeneous interacting cells" [Comput. Struct. Biotechnol. 20 (2022) 5661-5671]. Computational and Structural Biotechnology Journal. 21: 3158. PMID 37287810 DOI: 10.1016/j.csbj.2023.05.021 |
0.759 |
|
| 2022 |
Calzone L, Noël V, Barillot E, Kroemer G, Stoll G. Modeling signaling pathways in biology with MaBoSS: From one single cell to a dynamic population of heterogeneous interacting cells. Computational and Structural Biotechnology Journal. 20: 5661-5671. PMID 36284705 DOI: 10.1016/j.csbj.2022.10.003 |
0.792 |
|
| 2022 |
Captier N, Merlevede J, Molkenov A, Seisenova A, Zhubanchaliyev A, Nazarov PV, Barillot E, Kairov U, Zinovyev A. BIODICA: a computational environment for Independent Component Analysis of omics data. Bioinformatics (Oxford, England). 38: 2963-2964. PMID 35561190 DOI: 10.1093/bioinformatics/btac204 |
0.559 |
|
| 2022 |
Captier N, Merlevede J, Molkenov A, Seisenova A, Zhubanchaliyev A, Nazarov PV, Barillot E, Kairov U, Zinovyev A. BIODICA: a computational environment for Independent Component Analysis of omics data. Bioinformatics (Oxford, England). PMID 35462395 DOI: 10.1093/bioinformatics/btac204 |
0.559 |
|
| 2022 |
Captier N, Merlevede J, Molkenov A, Seisenova A, Zhubanchaliyev A, Nazarov PV, Barillot E, Kairov U, Zinovyev A. BIODICA: a computational environment for Independent Component Analysis. Bioinformatics (Oxford, England). PMID 35385067 DOI: 10.1093/bioinformatics/btac204 |
0.555 |
|
| 2022 |
Stoll G, Naldi A, Noël V, Viara E, Barillot E, Kroemer G, Thieffry D, Calzone L. UPMaBoSS: A Novel Framework for Dynamic Cell Population Modeling. Frontiers in Molecular Biosciences. 9: 800152. PMID 35309516 DOI: 10.3389/fmolb.2022.800152 |
0.77 |
|
| 2022 |
Zinovyev A, Sadovsky M, Calzone L, Fouché A, Groeneveld CS, Chervov A, Barillot E, Gorban AN. Modeling Progression of Single Cell Populations Through the Cell Cycle as a Sequence of Switches. Frontiers in Molecular Biosciences. 8: 793912. PMID 35178429 DOI: 10.3389/fmolb.2021.793912 |
0.734 |
|
| 2022 |
Montagud A, Béal J, Tobalina L, Traynard P, Subramanian V, Szalai B, Alföldi R, Puskás L, Valencia A, Barillot E, Saez-Rodriguez J, Calzone L. Patient-specific Boolean models of signalling networks guide personalised treatments. Elife. 11. PMID 35164900 DOI: 10.7554/eLife.72626 |
0.799 |
|
| 2021 |
Ostaszewski M, Niarakis A, Mazein A, Kuperstein I, Phair R, Orta-Resendiz A, Singh V, Aghamiri SS, Acencio ML, Glaab E, Ruepp A, Fobo G, Montrone C, Brauner B, Frishman G, ... ... Barillot E, et al. COVID-19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms. Molecular Systems Biology. 17: e10851. PMID 34939300 DOI: 10.15252/msb.202110851 |
0.766 |
|
| 2021 |
Noël V, Ruscone M, Stoll G, Viara E, Zinovyev A, Barillot E, Calzone L. WebMaBoSS: A Web Interface for Simulating Boolean Models Stochastically. Frontiers in Molecular Biosciences. 8: 754444. PMID 34888352 DOI: 10.3389/fmolb.2021.754444 |
0.798 |
|
| 2021 |
Ostaszewski M, Niarakis A, Mazein A, Kuperstein I, Phair R, Orta-Resendiz A, Singh V, Aghamiri SS, Acencio ML, Glaab E, Ruepp A, Fobo G, Montrone C, Brauner B, Frishman G, ... ... Barillot E, et al. COVID19 Disease Map, a computational knowledge repository of virus-host interaction mechanisms. Molecular Systems Biology. 17: e10387. PMID 34664389 DOI: 10.15252/msb.202110387 |
0.798 |
|
| 2021 |
Béal J, Pantolini L, Noël V, Barillot E, Calzone L. Personalized logical models to investigate cancer response to BRAF treatments in melanomas and colorectal cancers. Plos Computational Biology. 17: e1007900. PMID 33507915 DOI: 10.1371/journal.pcbi.1007900 |
0.789 |
|
| 2020 |
Albergante L, Mirkes E, Bac J, Chen H, Martin A, Faure L, Barillot E, Pinello L, Gorban A, Zinovyev A. Robust and Scalable Learning of Complex Intrinsic Dataset Geometry via ElPiGraph. Entropy (Basel, Switzerland). 22. PMID 33286070 DOI: 10.3390/e22030296 |
0.533 |
|
| 2020 |
Checcoli A, Pol JG, Naldi A, Noel V, Barillot E, Kroemer G, Thieffry D, Calzone L, Stoll G. Dynamical Boolean Modeling of Immunogenic Cell Death. Frontiers in Physiology. 11: 590479. PMID 33281620 DOI: 10.3389/fphys.2020.590479 |
0.779 |
|
| 2020 |
Kondratova M, Barillot E, Zinovyev A, Calzone L. Modelling of Immune Checkpoint Network Explains Synergistic Effects of Combined Immune Checkpoint Inhibitor Therapy and the Impact of Cytokines in Patient Response. Cancers. 12. PMID 33276543 DOI: 10.3390/cancers12123600 |
0.717 |
|
| 2020 |
Golovenkin SE, Bac J, Chervov A, Mirkes EM, Orlova YV, Barillot E, Gorban AN, Zinovyev A. Trajectories, bifurcations, and pseudo-time in large clinical datasets: applications to myocardial infarction and diabetes data. Gigascience. 9. PMID 33241287 DOI: 10.1093/gigascience/giaa128 |
0.525 |
|
| 2020 |
Balaur I, Roy L, Mazein A, Karaca SG, Dogrusoz U, Barillot E, Zinovyev A. cd2sbgnml: bidirectional conversion between CellDesigner and SBGN formats. Bioinformatics (Oxford, England). PMID 33146381 DOI: 10.1093/bioinformatics/btaa528 |
0.476 |
|
| 2020 |
Ostaszewski M, Mazein A, Gillespie ME, Kuperstein I, Niarakis A, Hermjakob H, Pico AR, Willighagen EL, Evelo CT, Hasenauer J, Schreiber F, Dräger A, Demir E, Wolkenhauer O, Furlong LI, ... Barillot E, et al. Author Correction: COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms. Scientific Data. 7: 247. PMID 32678106 DOI: 10.1038/S41597-020-00589-W |
0.469 |
|
| 2020 |
Koltai M, Noel V, Zinovyev A, Calzone L, Barillot E. Exact solving and sensitivity analysis of stochastic continuous time Boolean models. Bmc Bioinformatics. 21: 241. PMID 32527218 DOI: 10.1186/S12859-020-03548-9 |
0.773 |
|
| 2020 |
Ostaszewski M, Mazein A, Gillespie ME, Kuperstein I, Niarakis A, Hermjakob H, Pico AR, Willighagen EL, Evelo CT, Hasenauer J, Schreiber F, Dräger A, Demir E, Wolkenhauer O, Furlong LI, ... Barillot E, et al. COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms. Scientific Data. 7: 136. PMID 32371892 DOI: 10.1038/S41597-020-0477-8 |
0.46 |
|
| 2020 |
Ravel JM, Monraz Gomez LC, Sompairac N, Calzone L, Zhivotovsky B, Kroemer G, Barillot E, Zinovyev A, Kuperstein I. Comprehensive Map of the Regulated Cell Death Signaling Network: A Powerful Analytical Tool for Studying Diseases. Cancers. 12. PMID 32316560 DOI: 10.3390/Cancers12040990 |
0.777 |
|
| 2020 |
Zinovyev A, Czerwinska U, Cantini L, Barillot E, Frahm KM, Shepelyansky DL. Collective intelligence defines biological functions in Wikipedia as communities in the hidden protein connection network. Plos Computational Biology. 16: e1007652. PMID 32069277 DOI: 10.1371/Journal.Pcbi.1007652 |
0.607 |
|
| 2020 |
Aynaud MM, Mirabeau O, Gruel N, Grossetête S, Boeva V, Durand S, Surdez D, Saulnier O, Zaïdi S, Gribkova S, Fouché A, Kairov U, Raynal V, Tirode F, Grünewald TGP, ... ... Barillot E, et al. Transcriptional Programs Define Intratumoral Heterogeneity of Ewing Sarcoma at Single-Cell Resolution. Cell Reports. 30: 1767-1779.e6. PMID 32049009 DOI: 10.1016/J.Celrep.2020.01.049 |
0.616 |
|
| 2020 |
Balaur I, Roy L, Mazein A, Karaca SG, Dogrusoz U, Barillot E, Zinovyev A. cd2sbgnml: bidirectional conversion between CellDesigner and SBGN formats. Bioinformatics (Oxford, England). PMID 31904823 DOI: 10.1093/Bioinformatics/Btz969 |
0.568 |
|
| 2020 |
Colaprico A, Olsen C, Bailey MH, Odom GJ, Terkelsen T, Silva TC, Olsen AV, Cantini L, Zinovyev A, Barillot E, Noushmehr H, Bertoli G, Castiglioni I, Cava C, Bontempi G, et al. Interpreting pathways to discover cancer driver genes with Moonlight. Nature Communications. 11: 69. PMID 31900418 DOI: 10.1038/S41467-019-13803-0 |
0.615 |
|
| 2019 |
Kondratova M, Czerwinska U, Sompairac N, Amigorena SD, Soumelis V, Barillot E, Zinovyev A, Kuperstein I. A multiscale signalling network map of innate immune response in cancer reveals cell heterogeneity signatures. Nature Communications. 10: 4808. PMID 31641119 DOI: 10.1038/S41467-019-12270-X |
0.644 |
|
| 2019 |
Sompairac N, Nazarov PV, Czerwinska U, Cantini L, Biton A, Molkenov A, Zhumadilov Z, Barillot E, Radvanyi F, Gorban A, Kairov U, Zinovyev A. Independent Component Analysis for Unraveling the Complexity of Cancer Omics Datasets. International Journal of Molecular Sciences. 20. PMID 31500324 DOI: 10.3390/Ijms20184414 |
0.619 |
|
| 2019 |
Greco A, Sanchez Valle J, Pancaldi V, Baudot A, Barillot E, Caselle M, Valencia A, Zinovyev A, Cantini L. Molecular Inverse Comorbidity between Alzheimer's Disease and Lung Cancer: New Insights from Matrix Factorization. International Journal of Molecular Sciences. 20. PMID 31247897 DOI: 10.3390/Ijms20133114 |
0.668 |
|
| 2019 |
Sompairac N, Modamio J, Barillot E, Fleming RMT, Zinovyev A, Kuperstein I. Metabolic and signalling network maps integration: application to cross-talk studies and omics data analysis in cancer. Bmc Bioinformatics. 20: 140. PMID 30999838 DOI: 10.1186/S12859-019-2682-Z |
0.618 |
|
| 2019 |
Cantini L, Kairov U, de Reyniès A, Barillot E, Radvanyi F, Zinovyev A. Assessing reproducibility of matrix factorization methods in independent transcriptomes. Bioinformatics (Oxford, England). PMID 30938767 DOI: 10.1093/Bioinformatics/Btz225 |
0.56 |
|
| 2019 |
Cantini L, Bertoli G, Cava C, Dubois T, Zinovyev A, Caselle M, Castiglioni I, Barillot E, Martignetti L. Identification of microRNA clusters cooperatively acting on epithelial to mesenchymal transition in triple negative breast cancer. Nucleic Acids Research. PMID 30657980 DOI: 10.1093/Nar/Gkz016 |
0.577 |
|
| 2019 |
Vanacker H, Angevin E, Hollebecque A, Sun R, Deutsch E, Zynovyev A, Calzone L, Barillot E, Massard C, Verlingue L. Enhanced performance of prognostic estimation from TCGA RNAseq data using transfer learning Annals of Oncology. 30: v52. DOI: 10.1093/Annonc/Mdz239.073 |
0.59 |
|
| 2018 |
Béal J, Montagud A, Traynard P, Barillot E, Calzone L. Personalization of Logical Models With Multi-Omics Data Allows Clinical Stratification of Patients. Frontiers in Physiology. 9: 1965. PMID 30733688 DOI: 10.3389/Fphys.2018.01965 |
0.809 |
|
| 2018 |
Forget A, Martignetti L, Puget S, Calzone L, Brabetz S, Picard D, Montagud A, Liva S, Sta A, Dingli F, Arras G, Rivera J, Loew D, Besnard A, Lacombe J, ... ... Barillot E, et al. Aberrant ERBB4-SRC Signaling as a Hallmark of Group 4 Medulloblastoma Revealed by Integrative Phosphoproteomic Profiling. Cancer Cell. 34: 379-395.e7. PMID 30205043 DOI: 10.1016/J.Ccell.2018.08.002 |
0.777 |
|
| 2018 |
Letort G, Montagud A, Stoll G, Heiland R, Barillot E, Macklin P, Zinovyev A, Calzone L. PhysiBoSS: a multi-scale agent-based modelling framework integrating physical dimension and cell signalling. Bioinformatics (Oxford, England). PMID 30169736 DOI: 10.1093/Bioinformatics/Bty766 |
0.795 |
|
| 2018 |
Mazein A, Ostaszewski M, Kuperstein I, Watterson S, Le Novère N, Lefaudeux D, De Meulder B, Pellet J, Balaur I, Saqi M, Nogueira MM, He F, Parton A, Lemonnier N, Gawron P, ... ... Barillot E, et al. Systems medicine disease maps: community-driven comprehensive representation of disease mechanisms. Npj Systems Biology and Applications. 4: 21. PMID 29872544 DOI: 10.1038/s41540-018-0059-y |
0.555 |
|
| 2018 |
Monraz Gomez LC, Kondratova M, Ravel JM, Barillot E, Zinovyev A, Kuperstein I. Application of Atlas of Cancer Signalling Network in preclinical studies. Briefings in Bioinformatics. PMID 29726961 DOI: 10.1093/Bib/Bby031 |
0.662 |
|
| 2018 |
Kondratova M, Sompairac N, Barillot E, Zinovyev A, Kuperstein I. Signalling maps in cancer research: construction and data analysis. Database : the Journal of Biological Databases and Curation. 2018. PMID 29688383 DOI: 10.1093/Database/Bay036 |
0.622 |
|
| 2018 |
Ostaszewski M, Gebel S, Kuperstein I, Mazein A, Zinovyev A, Dogrusoz U, Hasenauer J, Fleming RMT, Le Novère N, Gawron P, Ligon T, Niarakis A, Nickerson D, Weindl D, Balling R, ... Barillot E, et al. Community-driven roadmap for integrated disease maps. Briefings in Bioinformatics. PMID 29688273 DOI: 10.1093/Bib/Bby024 |
0.621 |
|
| 2018 |
Cantini L, Calzone L, Martignetti L, Rydenfelt M, Blüthgen N, Barillot E, Zinovyev A. Classification of gene signatures for their information value and functional redundancy. Npj Systems Biology and Applications. 4: 2. PMID 29263798 DOI: 10.1038/s41540-017-0038-8 |
0.73 |
|
| 2018 |
Calzone L, Barillot E, Zinovyev A. Logical versus kinetic modeling of biological networks: applications in cancer research Current Opinion in Chemical Engineering. 21: 22-31. DOI: 10.1016/J.Coche.2018.02.005 |
0.662 |
|
| 2017 |
Montagud A, Traynard P, Martignetti L, Bonnet E, Barillot E, Zinovyev A, Calzone L. Conceptual and computational framework for logical modelling of biological networks deregulated in diseases. Briefings in Bioinformatics. PMID 29237040 DOI: 10.1093/Bib/Bbx163 |
0.816 |
|
| 2017 |
Kairov U, Cantini L, Greco A, Molkenov A, Czerwinska U, Barillot E, Zinovyev A. Determining the optimal number of independent components for reproducible transcriptomic data analysis. Bmc Genomics. 18: 712. PMID 28893186 DOI: 10.1186/S12864-017-4112-9 |
0.593 |
|
| 2017 |
Stoll G, Caron B, Viara E, Dugourd A, Zinovyev A, Naldi A, Kroemer G, Barillot E, Calzone L. MaBoSS 2.0: an environment for stochastic Boolean modeling. Bioinformatics (Oxford, England). 33: 2226-2228. PMID 28881959 DOI: 10.1093/Bioinformatics/Btx123 |
0.763 |
|
| 2017 |
Boeva V, Louis-Brennetot C, Peltier A, Durand S, Pierre-Eugène C, Raynal V, Etchevers HC, Thomas S, Lermine A, Daudigeos-Dubus E, Geoerger B, Orth MF, Grünewald TGP, Diaz E, Ducos B, ... ... Barillot E, et al. Heterogeneity of neuroblastoma cell identity defined by transcriptional circuitries. Nature Genetics. PMID 28740262 DOI: 10.1038/Ng.3921 |
0.323 |
|
| 2017 |
Dorel M, Viara E, Barillot E, Zinovyev A, Kuperstein I. NaviCom: a web application to create interactive molecular network portraits using multi-level omics data. Database : the Journal of Biological Databases and Curation. 2017. PMID 28415074 DOI: 10.1093/Database/Bax026 |
0.651 |
|
| 2017 |
Cantini L, Caselle M, Forget A, Zinovyev A, Barillot E, Martignetti L. A review of computational approaches detecting microRNAs involved in cancer. Frontiers in Bioscience (Landmark Edition). 22: 1774-1791. PMID 28410145 DOI: 10.2741/4571 |
0.58 |
|
| 2017 |
Forget A, Loredana M, Brabetz S, Picard D, Puget S, Calzone L, Poullet P, Montagud A, Liva S, Dingli F, Arras G, Yu H, Mercier A, Pouponnot C, Loew D, ... ... Barillot E, et al. CSIG-15. PROTEOMIC AND PHOSPHOPROTEOMIC ANALYSIS OF HUMAN MEDULLOBLASTOMA REVEALS DISTINCT ACTIVATED PATHWAYS BETWEEN SUBGROUPS Neuro-Oncology. 19: vi52-vi53. DOI: 10.1093/Neuonc/Nox168.209 |
0.768 |
|
| 2016 |
Verlingue L, Dugourd A, Stoll G, Barillot E, Calzone L, Londoño-Vallejo A. A comprehensive approach to the molecular determinants of lifespan using a Boolean model of geroconversion. Aging Cell. PMID 27613445 DOI: 10.1111/Acel.12504 |
0.677 |
|
| 2016 |
Jdey W, Thierry S, Russo C, Devun F, Al Abo M, Noguiez-Hellin P, Sun JS, Barillot E, Zinovyev A, Kuperstein I, Pommier Y, Dutreix M. Drug Driven Synthetic Lethality: bypassing tumor cell genetics with a combination of Dbait and PARP inhibitors. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. PMID 27559053 DOI: 10.1158/1078-0432.Ccr-16-1193 |
0.582 |
|
| 2016 |
Martignetti L, Calzone L, Bonnet E, Barillot E, Zinovyev A. ROMA: Representation and Quantification of Module Activity from Target Expression Data. Frontiers in Genetics. 7: 18. PMID 26925094 DOI: 10.3389/Fgene.2016.00018 |
0.739 |
|
| 2016 |
Iakovishina D, Janoueix-Lerosey I, Barillot E, Regnier M, Boeva V. SV-Bay: structural variant detection in cancer genomes using a Bayesian approach with correction for GC-content and read mappability. Bioinformatics (Oxford, England). 32: 984-92. PMID 26740523 DOI: 10.1093/Bioinformatics/Btv751 |
0.3 |
|
| 2016 |
Cantini L, Barillot E, Radvanyi F, Zinovyev A. Independent component analysis (ICA) unveils the landscape of multi-omics pancancer data F1000research. 5. DOI: 10.7490/F1000Research.1112804.1 |
0.573 |
|
| 2016 |
Czerwińska U, Barillot E, Soumelis V, Zinovyev A. Deconvolution of cell and environment specific signals and their interactions from complex mixtures in biological samples F1000research. 5. DOI: 10.7490/F1000Research.1112649.1 |
0.591 |
|
| 2016 |
Deveau P, Barillot E, Boeva V, Zinovyev A, Bonnet E. Calculating Biological Module Enrichment or Depletion and Visualizing Data on Large-scale Molecular Maps with ACSNMineR and RNaviCell Packages The R Journal. 8: 293. DOI: 10.32614/Rj-2016-047 |
0.586 |
|
| 2016 |
Verlingue L, Calzone L, Kamal M, Servant N, Belin L, Barillot E, Tourneau CL. Abstract 1509:In silicoprediction of the clinical response to the mTOR inhibitor everolimus using a Boolean model: validation from a cohort of the SHIVA trial Cancer Research. 76: 1509-1509. DOI: 10.1158/1538-7445.Am2016-1509 |
0.677 |
|
| 2016 |
Dutreix M, Jdey W, Thierry S, Devun F, Kuperstein I, Zinovyev A, Barillot E. Drugs driven synthetic lethality: getting rid of tumor genetics with combination of Dbait and PARP inhibitors European Journal of Cancer. 61: S115. DOI: 10.1016/S0959-8049(16)61407-7 |
0.555 |
|
| 2015 |
Cohen DP, Martignetti L, Robine S, Barillot E, Zinovyev A, Calzone L. Mathematical Modelling of Molecular Pathways Enabling Tumour Cell Invasion and Migration. Plos Computational Biology. 11: e1004571. PMID 26528548 DOI: 10.1371/Journal.Pcbi.1004571 |
0.771 |
|
| 2015 |
Czerwinska U, Calzone L, Barillot E, Zinovyev A. DeDaL: Cytoscape 3 app for producing and morphing data-driven and structure-driven network layouts. Bmc Systems Biology. 9: 46. PMID 26271256 DOI: 10.1186/S12918-015-0189-4 |
0.742 |
|
| 2015 |
Dorel M, Barillot E, Zinovyev A, Kuperstein I. Network-based approaches for drug response prediction and targeted therapy development in cancer. Biochemical and Biophysical Research Communications. 464: 386-91. PMID 26086105 DOI: 10.1016/J.Bbrc.2015.06.094 |
0.636 |
|
| 2015 |
Martignetti L, Tesson B, Almeida A, Zinovyev A, Tucker GC, Dubois T, Barillot E. Detection of miRNA regulatory effect on triple negative breast cancer transcriptome. Bmc Genomics. 16: S4. PMID 26046581 DOI: 10.1186/1471-2164-16-S6-S4 |
0.588 |
|
| 2015 |
Calzone L, Barillot E, Zinovyev A. Predicting genetic interactions from Boolean models of biological networks. Integrative Biology : Quantitative Biosciences From Nano to Macro. 7: 921-9. PMID 25958956 DOI: 10.1039/C5Ib00029G |
0.763 |
|
| 2015 |
Bonnet E, Viara E, Kuperstein I, Calzone L, Cohen DP, Barillot E, Zinovyev A. NaviCell Web Service for network-based data visualization. Nucleic Acids Research. 43: W560-5. PMID 25958393 DOI: 10.1093/Nar/Gkv450 |
0.75 |
|
| 2015 |
Cappuccio A, Zollinger R, Schenk M, Walczak A, Servant N, Barillot E, Hupé P, Modlin RL, Soumelis V. Combinatorial code governing cellular responses to complex stimuli. Nature Communications. 6: 6847. PMID 25896517 DOI: 10.1038/Ncomms7847 |
0.349 |
|
| 2015 |
Kuperstein I, Grieco L, Cohen DP, Thieffry D, Zinovyev A, Barillot E. The shortest path is not the one you know: application of biological network resources in precision oncology research. Mutagenesis. 30: 191-204. PMID 25688112 DOI: 10.1093/Mutage/Geu078 |
0.667 |
|
| 2015 |
Kuperstein I, Bonnet E, Nguyen HA, Cohen D, Viara E, Grieco L, Fourquet S, Calzone L, Russo C, Kondratova M, Dutreix M, Barillot E, Zinovyev A. Atlas of Cancer Signalling Network: A systems biology resource for integrative analysis of cancer data with Google Maps Oncogenesis. 4. DOI: 10.1038/oncsis.2015.19 |
0.654 |
|
| 2014 |
Biton A, Bernard-Pierrot I, Lou Y, Krucker C, Chapeaublanc E, Rubio-Pérez C, López-Bigas N, Kamoun A, Neuzillet Y, Gestraud P, Grieco L, Rebouissou S, de Reyniès A, Benhamou S, Lebret T, ... ... Barillot E, et al. Independent component analysis uncovers the landscape of the bladder tumor transcriptome and reveals insights into luminal and basal subtypes. Cell Reports. 9: 1235-45. PMID 25456126 DOI: 10.1016/J.Celrep.2014.10.035 |
0.613 |
|
| 2014 |
Chanrion M, Kuperstein I, Barrière C, El Marjou F, Cohen D, Vignjevic D, Stimmer L, Paul-Gilloteaux P, Bièche I, Tavares Sdos R, Boccia GF, Cacheux W, Meseure D, Fre S, Martignetti L, ... ... Barillot E, et al. Concomitant Notch activation and p53 deletion trigger epithelial-to-mesenchymal transition and metastasis in mouse gut. Nature Communications. 5: 5005. PMID 25295490 DOI: 10.1038/Ncomms6005 |
0.619 |
|
| 2014 |
Calzone L, Kuperstein I, Cohen D, Grieco L, Bonnet E, Servant N, Hupé P, Zinovyev A, Barillot E. [Biological network modelling and precision medicine in oncology]. Bulletin Du Cancer. 101: S18-21. PMID 24966078 DOI: 10.1684/Bdc.2014.1973 |
0.76 |
|
| 2014 |
Servant N, Roméjon J, Gestraud P, La Rosa P, Lucotte G, Lair S, Bernard V, Zeitouni B, Coffin F, Jules-Clément G, Yvon F, Lermine A, Poullet P, Liva S, Pook S, ... ... Barillot E, et al. Bioinformatics for precision medicine in oncology: principles and application to the SHIVA clinical trial. Frontiers in Genetics. 5: 152. PMID 24910641 DOI: 10.3389/Fgene.2014.00152 |
0.327 |
|
| 2014 |
Gendrel AV, Attia M, Chen CJ, Diabangouaya P, Servant N, Barillot E, Heard E. Developmental dynamics and disease potential of random monoallelic gene expression. Developmental Cell. 28: 366-80. PMID 24576422 DOI: 10.1016/J.Devcel.2014.01.016 |
0.306 |
|
| 2014 |
Surdez D, Stoll G, Tirode F, Laud K, Barillot E, Delattre O. Abstract 3989: High throughput screening highlights NFkB signaling in Ewing sarcoma Cancer Research. 74: 3989-3989. DOI: 10.1158/1538-7445.Am2014-3989 |
0.366 |
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| 2013 |
Kuperstein I, Cohen DP, Pook S, Viara E, Calzone L, Barillot E, Zinovyev A. NaviCell: a web-based environment for navigation, curation and maintenance of large molecular interaction maps. Bmc Systems Biology. 7: 100. PMID 24099179 DOI: 10.1186/1752-0509-7-100 |
0.744 |
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| 2013 |
Ashoor H, Hérault A, Kamoun A, Radvanyi F, Bajic VB, Barillot E, Boeva V. HMCan: a method for detecting chromatin modifications in cancer samples using ChIP-seq data. Bioinformatics (Oxford, England). 29: 2979-86. PMID 24021381 DOI: 10.1093/Bioinformatics/Btt524 |
0.332 |
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| 2013 |
Boeva V, Jouannet S, Daveau R, Combaret V, Pierre-Eugène C, Cazes A, Louis-Brennetot C, Schleiermacher G, Ferrand S, Pierron G, Lermine A, Rio Frio T, Raynal V, Vassal G, Barillot E, et al. Breakpoint features of genomic rearrangements in neuroblastoma with unbalanced translocations and chromothripsis. Plos One. 8: e72182. PMID 23991058 DOI: 10.1371/Journal.Pone.0072182 |
0.316 |
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| 2013 |
Stoll G, Surdez D, Tirode F, Laud K, Barillot E, Zinovyev A, Delattre O. Systems biology of Ewing sarcoma: a network model of EWS-FLI1 effect on proliferation and apoptosis. Nucleic Acids Research. 41: 8853-71. PMID 23935076 DOI: 10.1093/Nar/Gkt678 |
0.65 |
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| 2013 |
Bonnet E, Calzone L, Rovera D, Stoll G, Barillot E, Zinovyev A. Practical use of BiNoM: a biological network manager software. Methods in Molecular Biology (Clifton, N.J.). 1021: 127-46. PMID 23715983 DOI: 10.1007/978-1-62703-450-0_7 |
0.751 |
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| 2013 |
Cohen D, Kuperstein I, Barillot E, Zinovyev A, Calzone L. From a biological hypothesis to the construction of a mathematical model. Methods in Molecular Biology (Clifton, N.J.). 1021: 107-25. PMID 23715982 DOI: 10.1007/978-1-62703-450-0_6 |
0.756 |
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| 2013 |
Maire V, Baldeyron C, Richardson M, Tesson B, Vincent-Salomon A, Gravier E, Marty-Prouvost B, De Koning L, Rigaill G, Dumont A, Gentien D, Barillot E, Roman-Roman S, Depil S, Cruzalegui F, et al. TTK/hMPS1 is an attractive therapeutic target for triple-negative breast cancer. Plos One. 8: e63712. PMID 23700430 DOI: 10.1371/Journal.Pone.0063712 |
0.318 |
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| 2013 |
Vera-Licona P, Bonnet E, Barillot E, Zinovyev A. OCSANA: optimal combinations of interventions from network analysis. Bioinformatics (Oxford, England). 29: 1571-3. PMID 23626000 DOI: 10.1093/Bioinformatics/Btt195 |
0.586 |
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| 2013 |
Zinovyev A, Kuperstein I, Barillot E, Heyer WD. Synthetic lethality between gene defects affecting a single non-essential molecular pathway with reversible steps. Plos Computational Biology. 9: e1003016. PMID 23592964 DOI: 10.1371/Journal.Pcbi.1003016 |
0.63 |
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| 2013 |
Bonnet E, Calzone L, Rovera D, Stoll G, Barillot E, Zinovyev A. BiNoM 2.0, a Cytoscape plugin for accessing and analyzing pathways using standard systems biology formats. Bmc Systems Biology. 7: 18. PMID 23453054 DOI: 10.1186/1752-0509-7-18 |
0.758 |
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| 2013 |
Maire V, Némati F, Richardson M, Vincent-Salomon A, Tesson B, Rigaill G, Gravier E, Marty-Prouvost B, De Koning L, Lang G, Gentien D, Dumont A, Barillot E, Marangoni E, Decaudin D, et al. Polo-like kinase 1: a potential therapeutic option in combination with conventional chemotherapy for the management of patients with triple-negative breast cancer. Cancer Research. 73: 813-23. PMID 23144294 DOI: 10.1158/0008-5472.Can-12-2633 |
0.31 |
|
| 2013 |
Cazes A, Louis-Brennetot C, Mazot P, Dingli F, Lombard B, Boeva V, Daveau R, Cappo J, Combaret V, Schleiermacher G, Jouannet S, Ferrand S, Pierron G, Barillot E, Loew D, et al. Characterization of rearrangements involving the ALK gene reveals a novel truncated form associated with tumor aggressiveness in neuroblastoma. Cancer Research. 73: 195-204. PMID 23139213 DOI: 10.1158/0008-5472.Can-12-1242 |
0.322 |
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| 2013 |
Maubant S, Maire V, Tesson B, Némati F, Dumont A, Gentien D, Marty-Prouvost B, Rigaill G, Koning LD, Vincent-Salomon A, Barillot E, Decaudin D, Pierré A, Depil S, Cruzalegui F, et al. Abstract B233: The depletion of LRP5, unlike that of LRP6, promotes apoptosis in triple-negative breast cancer cells, making it an interesting therapeutic target. Molecular Cancer Therapeutics. 12. DOI: 10.1158/1535-7163.Targ-13-B233 |
0.356 |
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| 2013 |
Zinovyev A, Calzone L, Fourquet S, Barillot E. How cell decides between life and death: Mathematical modeling of epigenetic landscapes of cellular fates Springer Proceedings in Mathematics. 15: 191-204. DOI: 10.1007/978-3-642-20164-6_16 |
0.716 |
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| 2012 |
Stoll G, Viara E, Barillot E, Calzone L. Continuous time Boolean modeling for biological signaling: application of Gillespie algorithm. Bmc Systems Biology. 6: 116. PMID 22932419 DOI: 10.1186/1752-0509-6-116 |
0.674 |
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| 2012 |
Galluzzi L, Vitale I, Senovilla L, Eisenberg T, Carmona-Gutierrez D, Vacchelli E, Robert T, Ripoche H, Jägemann N, Paccard C, Servant N, Hupé P, Lazar V, Dessen P, Barillot E, et al. Independent transcriptional reprogramming and apoptosis induction by cisplatin. Cell Cycle (Georgetown, Tex.). 11: 3472-80. PMID 22918244 DOI: 10.4161/Cc.21789 |
0.313 |
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| 2012 |
Martignetti L, Laud-Duval K, Tirode F, Pierron G, Reynaud S, Barillot E, Delattre O, Zinovyev A. Antagonism pattern detection between microRNA and target expression in Ewing's sarcoma. Plos One. 7: e41770. PMID 22848594 DOI: 10.1371/Journal.Pone.0041770 |
0.558 |
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| 2012 |
Martignetti L, Zinovyev A, Barillot E. Identification of shortened 3' untranslated regions from expression arrays. Journal of Bioinformatics and Computational Biology. 10: 1241001. PMID 22809337 DOI: 10.1142/S0219720012410016 |
0.611 |
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| 2012 |
Zinovyev A, Fourquet S, Tournier L, Calzone L, Barillot E. Cell death and life in cancer: mathematical modeling of cell fate decisions. Advances in Experimental Medicine and Biology. 736: 261-74. PMID 22161334 DOI: 10.1007/978-1-4419-7210-1_15 |
0.759 |
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| 2012 |
Martignetti L, Laud-Duval K, Tirode F, Pierron G, Reynaud S, Barillot E, Delattre O, Zinovyev A. Two different relationships can be distinguished between the expression of a given miRNA and a target. Plos One. DOI: 10.1371/Journal.Pone.0041770.G001 |
0.538 |
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| 2012 |
Vera-Licona P, Zinovyev A, Bonnet E, Kupperstein I, Kel-Margoulis O, Kel-Margoulis A, Dubois T, Tucker G, Barillot E. Abstract A13: A signaling pathway rationale for the design of combination therapies for cancer Cancer Research. 72. DOI: 10.1158/1538-7445.Csb12-A13 |
0.647 |
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| 2012 |
Tesson BM, Rigaill G, Vincent-Salomon A, Gentien D, Roman-Roman S, Pierré A, Cruzalegui F, Depil S, Tucker G, Dubois T, Barillot E. Abstract 5130: Integrative approaches for the identification of therapeutic targets in basal like breast cancer from multi-level molecular data Cancer Research. 72: 5130-5130. DOI: 10.1158/1538-7445.Am2012-5130 |
0.309 |
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| 2012 |
Maire V, Némati F, Marty-Prouvost B, Dumont A, Richardson M, Vincent-Salomon A, Lang G, Tesson B, Rigaill G, Barillot E, Marangoni E, Decaudin D, Roman-Roman S, Pierré A, Cruzalegui F, et al. Abstract 2938: Polo-like kinase 1: a potential therapeutic target for the management of patients with triple negative breast cancer Cancer Research. 72: 2938-2938. DOI: 10.1158/1538-7445.Am2012-2938 |
0.313 |
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| 2012 |
Calzone L, Remy E, Coffin F, Radvanyi F, Rebouissou S, Zinovyev A, Barillot E, Chaouiya C. 656 Mathematical Modeling of Bladder Tumorigenesis European Journal of Cancer. 48: S155-S156. DOI: 10.1016/S0959-8049(12)71303-5 |
0.59 |
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| 2012 |
Vera-Licona P, Zinovyev A, Bonnet E, Kuperstein I, Kel O, Kel A, Dubois T, Tucker G, Barillot E. 650 A Pathway-based Design of Rational Combination Therapies for Cancer European Journal of Cancer. 48: S154. DOI: 10.1016/S0959-8049(12)71297-2 |
0.581 |
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| 2012 |
Martignetti L, Laud-Duval K, Tirode F, Barillot E, Delattre O, Zinovyev A. 648 Identification of Shortened 3 Untranslated Regions and Impact on MicroRNA Regulation European Journal of Cancer. 48. DOI: 10.1016/S0959-8049(12)71296-0 |
0.539 |
|
| 2012 |
Kuperstein I, Zinovyev A, Cohen D, Fourquet S, Calzone L, Pook S, Vera-Licona P, Bonnet E, Rovera D, Barillot E. 640 Towards of Atlas of Cancer Signaling Networks – Basis for the Institut Curie Systems Biology Platform for Data Analysis and Interpretation European Journal of Cancer. 48: S152. DOI: 10.1016/S0959-8049(12)71288-1 |
0.633 |
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| 2012 |
Kuperstein I, Zinovyev A, Barillot E, Heyer W. 639 Mathematical Modeling of Synthetic Lethality With Applications to DNA Repair European Journal of Cancer. 48: S151-S152. DOI: 10.1016/S0959-8049(12)71287-X |
0.562 |
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| 2012 |
Tesson BM, Rigaill G, Gentien D, Roman-Roman S, Cruzalegui F, Depil S, Pierré A, Tucker G, Dubois T, Barillot E. 576 Integrative Approaches for the Identification of Therapeutic Targets in Basal-like Breast Cancer From Multi-level Molecular Data European Journal of Cancer. 48. DOI: 10.1016/S0959-8049(12)71234-0 |
0.31 |
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| 2012 |
Stoll G, Surdez D, Barillot E, Delattre O, Zinovyev A. 463 Constructing Therapeutic Strategies for Ewing Sarcoma by Systems Biology Approach European Journal of Cancer. 48: S111. DOI: 10.1016/S0959-8049(12)71136-X |
0.57 |
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| 2011 |
Corpet A, De Koning L, Toedling J, Savignoni A, Berger F, Lemaître C, O'Sullivan RJ, Karlseder J, Barillot E, Asselain B, Sastre-Garau X, Almouzni G. Asf1b, the necessary Asf1 isoform for proliferation, is predictive of outcome in breast cancer. The Embo Journal. 30: 480-93. PMID 21179005 DOI: 10.1038/Emboj.2010.335 |
0.3 |
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| 2011 |
Laurent C, Valet F, Planque N, Silveri L, Maacha S, Anezo O, Hupe P, Plancher C, Reyes C, Albaud B, Rapinat A, Gentien D, Couturier J, Sastre-Garau X, Desjardins L, ... ... Barillot E, et al. High PTP4A3 phosphatase expression correlates with metastatic risk in uveal melanoma patients. Cancer Research. 71: 666-74. PMID 21135111 DOI: 10.1158/0008-5472.Can-10-0605 |
0.302 |
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| 2011 |
Boeva V, Zinovyev A, Bleakley K, Vert JP, Janoueix-Lerosey I, Delattre O, Barillot E. Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization. Bioinformatics (Oxford, England). 27: 268-9. PMID 21081509 DOI: 10.1093/Bioinformatics/Btq635 |
0.594 |
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| 2011 |
Boeva V, Zeitouni B, Bleakley K, Zinovyev A, Vert J, Janoueix-Lerosey I, Delattre O, Barillot E. Getting maximum information from your paired-end reads: A package for accurate detection of copy number alterations F1000research. 2. DOI: 10.7490/F1000Research.1933.1 |
0.545 |
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| 2011 |
Laurent C, Nemati F, Gentien D, Desjardins L, Mariani P, Rapinat A, Sastre-Garau X, Hego C, Couturier J, Piperno-Neumann S, Roman-Roman S, Barillot E, Saule S, Decaudin D. Abstract B16: Genomic, genetic, and gene expression profile characterization of a panel of primary human uveal melanoma xenografts. Molecular Cancer Therapeutics. 10. DOI: 10.1158/1535-7163.Targ-11-B16 |
0.324 |
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| 2010 |
Rimmelé P, Komatsu J, Hupé P, Roulin C, Barillot E, Dutreix M, Conseiller E, Bensimon A, Moreau-Gachelin F, Guillouf C. Spi-1/PU.1 oncogene accelerates DNA replication fork elongation and promotes genetic instability in the absence of DNA breakage. Cancer Research. 70: 6757-66. PMID 20660370 DOI: 10.1158/0008-5472.Can-09-4691 |
0.3 |
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| 2010 |
Calzone L, Tournier L, Fourquet S, Thieffry D, Zhivotovsky B, Barillot E, Zinovyev A. Mathematical modelling of cell-fate decision in response to death receptor engagement. Plos Computational Biology. 6: e1000702. PMID 20221256 DOI: 10.1371/Journal.Pcbi.1000702 |
0.764 |
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| 2010 |
Zinovyev A, Morozova N, Nonne N, Barillot E, Harel-Bellan A, Gorban AN. Dynamical modeling of microRNA action on the protein translation process. Bmc Systems Biology. 4: 13. PMID 20181238 DOI: 10.1186/1752-0509-4-13 |
0.587 |
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| 2010 |
Hindie V, Tafelmeyer P, Meil A, Collura V, Hamburger A, Wojcik J, Barillot E, Boissy G, Camonis J, Daviet L, Formstecher E. Abstract 4016: Large scale, domain-based comparative protein interaction mapping in cancer cell signaling Cancer Research. 70: 4016-4016. DOI: 10.1158/1538-7445.Am10-4016 |
0.361 |
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| 2010 |
Kuperstein I, Vera-Licona P, Zinovyev A, Tucker G, Dubois T, Barillot E. 826 Integrated cell cycle and DNA repair signalling network modelling for identification of key molecular regulators in basal-like breast cancer European Journal of Cancer Supplements. 8: 208-209. DOI: 10.1016/S1359-6349(10)71622-0 |
0.627 |
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| 2009 |
Barillot E, Calzone L, Zinovyev A. [Systems biology of cancer]. MéDecine Sciences : M/S. 25: 601-7. PMID 19602357 DOI: 10.1051/Medsci/2009256-7601 |
0.768 |
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| 2009 |
Novikov E, Barillot E. Model selection in the reconstruction of regulatory networks from time-series data. Bmc Research Notes. 2: 68. PMID 19416509 DOI: 10.1186/1756-0500-2-68 |
0.349 |
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| 2009 |
Aebersold R, Auffray C, Baney E, Barillot E, Brazma A, Brett C, Brunak S, Butte A, Califano A, Celis J, Cufer T, Ferrell J, Galas D, Gallahan D, Gatenby R, et al. Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008). Molecular Oncology. 3: 9-17. PMID 19383362 DOI: 10.1016/J.Molonc.2008.11.003 |
0.642 |
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| 2009 |
Valet F, Cremoux Pd, Spyratos F, Gentien D, Servant N, Scott V, Lehmann-Che J, Lebigot I, Sigal-Zafrani B, Mathieu M, Bertheau P, Guinebretière J, Rolland E, Pierga J, Delaloge S, ... ... Barillot E, et al. Do Transcriptomic Markers Provide Significant and Stable Information in Addition to Standard Markers, for the Prediction of Pathological Complete Response in Breast Cancer? Cancer Research. 69: 2035-2035. DOI: 10.1158/0008-5472.Sabcs-09-2035 |
0.337 |
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| 2009 |
Surdez D, Stoll G, Tirode F, Laud K, Zinovyev A, Barillot E, Delattre O. Abstract B71: A systems biology approach to study Ewing's sarcoma Cancer Research. 69. DOI: 10.1158/0008-5472.Fbcr09-B71 |
0.665 |
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| 2008 |
Marty B, Maire V, Gravier E, Rigaill G, Vincent-Salomon A, Kappler M, Lebigot I, Djelti F, Tourdès A, Gestraud P, Hupé P, Barillot E, Cruzalegui F, Tucker GC, Stern MH, et al. Frequent PTEN genomic alterations and activated phosphatidylinositol 3-kinase pathway in basal-like breast cancer cells. Breast Cancer Research : Bcr. 10: R101. PMID 19055754 DOI: 10.1186/Bcr2204 |
0.331 |
|
| 2008 |
Calzone L, Gelay A, Zinovyev A, Radvanyi F, Barillot E. A comprehensive modular map of molecular interactions in RB/E2F pathway. Molecular Systems Biology. 4: 173. PMID 18319725 DOI: 10.1038/Msb.2008.7 |
0.77 |
|
| 2008 |
Novikov E, Barillot E. Regulatory network reconstruction using an integral additive model with flexible kernel functions. Bmc Systems Biology. 2: 8. PMID 18218091 DOI: 10.1186/1752-0509-2-8 |
0.361 |
|
| 2008 |
Zinovyev A, Viara E, Calzone L, Barillot E. BiNoM: a Cytoscape plugin for manipulating and analyzing biological networks. Bioinformatics (Oxford, England). 24: 876-7. PMID 18024474 DOI: 10.1093/Bioinformatics/Btm553 |
0.741 |
|
| 2007 |
Elati M, Neuvial P, Bolotin-Fukuhara M, Barillot E, Radvanyi F, Rouveirol C. LICORN: learning cooperative regulation networks from gene expression data. Bioinformatics (Oxford, England). 23: 2407-14. PMID 17720703 DOI: 10.1093/Bioinformatics/Btm352 |
0.31 |
|
| 2007 |
Abal M, Obrador-Hevia A, Janssen KP, Casadome L, Menendez M, Carpentier S, Barillot E, Wagner M, Ansorge W, Moeslein G, Fsihi H, Bezrookove V, Reventos J, Louvard D, Capella G, et al. APC inactivation associates with abnormal mitosis completion and concomitant BUB1B/MAD2L1 up-regulation. Gastroenterology. 132: 2448-58. PMID 17570218 DOI: 10.1053/J.Gastro.2007.03.027 |
0.318 |
|
| 2007 |
Hupé P, La Rosa P, Liva S, Lair S, Servant N, Barillot E. ACTuDB, a new database for the integrated analysis of array-CGH and clinical data for tumors. Oncogene. 26: 6641-52. PMID 17496932 DOI: 10.1038/Sj.Onc.1210488 |
0.334 |
|
| 2007 |
Rapaport F, Zinovyev A, Dutreix M, Barillot E, Vert JP. Classification of microarray data using gene networks. Bmc Bioinformatics. 8: 35. PMID 17270037 DOI: 10.1186/1471-2105-8-35 |
0.621 |
|
| 2006 |
Liva S, Hupé P, Neuvial P, Brito I, Viara E, La Rosa P, Barillot E. CAPweb: a bioinformatics CGH array Analysis Platform. Nucleic Acids Research. 34: W477-81. PMID 16845053 DOI: 10.1093/Nar/Gkl215 |
0.301 |
|
| 2006 |
La Rosa P, Viara E, Hupé P, Pierron G, Liva S, Neuvial P, Brito I, Lair S, Servant N, Robine N, Manié E, Brennetot C, Janoueix-Lerosey I, Raynal V, Gruel N, ... ... Barillot E, et al. VAMP: visualization and analysis of array-CGH, transcriptome and other molecular profiles. Bioinformatics (Oxford, England). 22: 2066-73. PMID 16820431 DOI: 10.1093/Bioinformatics/Btl359 |
0.323 |
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| 2006 |
Rouveirol C, Stransky N, Hupé P, Rosa PL, Viara E, Barillot E, Radvanyi F. Computation of recurrent minimal genomic alterations from array-CGH data. Bioinformatics (Oxford, England). 22: 849-56. PMID 16434445 DOI: 10.1093/Bioinformatics/Btl004 |
0.304 |
|
| 2006 |
Elfilali A, Lair S, Verbeke C, La Rosa P, Radvanyi F, Barillot E. ITTACA: a new database for integrated tumor transcriptome array and clinical data analysis Nucleic Acids Research.. 34: D613-616. PMID 16381943 DOI: 10.1093/Nar/Gkj022 |
0.332 |
|
| 2003 |
Karsenty E, Barillot E, Tosser-Klopp G, Lahbib-Mansais Y, Milan D, Hatey F, Cirera S, Sawera M, Jørgensen CB, Chowdhary B, Fredholm M, Wimmers K, Ponsuksili S, Davoli R, Fontanesi L, et al. The GENETPIG database: a tool for comparative mapping in pig (Sus scrofa). Nucleic Acids Research. 31: 138-41. PMID 12519967 DOI: 10.1093/Nar/Gkg061 |
0.301 |
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