Year |
Citation |
Score |
2023 |
Xu MR, Liao ZY, Brock JR, Du K, Li GY, Chen ZQ, Wang YH, Gao ZN, Agarwal G, Wei KH, Shao F, Pang S, Platts AE, van de Velde J, Lin HM, ... ... Niederhuth CE, et al. Maternal dominance contributes to subgenome differentiation in allopolyploid fishes. Nature Communications. 14: 8357. PMID 38102128 DOI: 10.1038/s41467-023-43740-y |
0.316 |
|
2023 |
Kenchanmane Raju SK, Lensink M, Kliebenstein DJ, Niederhuth C, Monroe G. Epigenomic divergence correlates with sequence polymorphism in Arabidopsis paralogs. The New Phytologist. PMID 37614211 DOI: 10.1111/nph.19227 |
0.733 |
|
2023 |
Kenchanmane Raju SK, Ledford M, Niederhuth CE. DNA methylation signatures of duplicate gene evolution in angiosperms. Plant Physiology. PMID 37061825 DOI: 10.1093/plphys/kiad220 |
0.762 |
|
2022 |
St Aubin B, Wai CM, Kenchanmane Raju SK, Niederhuth CE, VanBuren R. Regulatory dynamics distinguishing desiccation tolerance strategies within resurrection grasses. Plant Direct. 6: e457. PMID 36523607 DOI: 10.1002/pld3.457 |
0.71 |
|
2021 |
Arias T, Niederhuth CE, McSteen P, Pires JC. The Molecular Basis of Kale Domestication: Transcriptional Profiling of Developing Leaves Provides New Insights Into the Evolution of a Vegetative Morphotype. Frontiers in Plant Science. 12: 637115. PMID 33747016 DOI: 10.3389/fpls.2021.637115 |
0.444 |
|
2021 |
Bentz AB, Niederhuth CE, Carruth LL, Navara KJ. Prenatal testosterone triggers long-term behavioral changes in male zebra finches: unravelling the neurogenomic mechanisms. Bmc Genomics. 22: 158. PMID 33676394 DOI: 10.1186/s12864-021-07466-9 |
0.35 |
|
2021 |
Ritter EJ, Niederhuth CE. Intertwined evolution of plant epigenomes and genomes. Current Opinion in Plant Biology. 61: 101990. PMID 33445143 DOI: 10.1016/j.pbi.2020.101990 |
0.571 |
|
2020 |
Bird KA, Niederhuth C, Ou S, Gehan M, Pires JC, Xiong Z, VanBuren R, Edger PP. Replaying the evolutionary tape to investigate subgenome dominance in allopolyploid Brassica napus. The New Phytologist. PMID 33280122 DOI: 10.1111/nph.17137 |
0.418 |
|
2020 |
Agarwal G, Kudapa H, Ramalingam A, Choudhary D, Sinha P, Garg V, Singh VK, Patil GB, Pandey MK, Nguyen HT, Guo B, Sunkar R, Niederhuth CE, Varshney RK. Epigenetics and epigenomics: underlying mechanisms, relevance, and implications in crop improvement. Functional & Integrative Genomics. PMID 33089419 DOI: 10.1007/s10142-020-00756-7 |
0.471 |
|
2019 |
Kenchanmane Raju SK, Ritter EJ, Niederhuth CE. Establishment, maintenance, and biological roles of non-CG methylation in plants. Essays in Biochemistry. PMID 31652316 DOI: 10.1042/EBC20190032 |
0.755 |
|
2017 |
Bewick AJ, Niederhuth CE, Ji L, Rohr NA, Griffin PT, Leebens-Mack J, Schmitz RJ. The evolution of CHROMOMETHYLASES and gene body DNA methylation in plants. Genome Biology. 18: 65. PMID 28457232 DOI: 10.1186/S13059-017-1195-1 |
0.71 |
|
2016 |
Niederhuth CE, Bewick AJ, Ji L, Alabady MS, Kim KD, Li Q, Rohr NA, Rambani A, Burke JM, Udall JA, Egesi C, Schmutz J, Grimwood J, Jackson SA, Springer NM, et al. Widespread natural variation of DNA methylation within angiosperms. Genome Biology. 17: 194. PMID 27671052 DOI: 10.1186/S13059-016-1059-0 |
0.674 |
|
2016 |
Niederhuth CE, Schmitz RJ. Putting DNA methylation in context: from genomes to gene expression in plants. Biochimica Et Biophysica Acta. PMID 27590871 DOI: 10.1016/J.Bbagrm.2016.08.009 |
0.737 |
|
2016 |
Bewick AJ, Ji L, Niederhuth CE, Willing EM, Hofmeister BT, Shi X, Wang L, Lu Z, Rohr NA, Hartwig B, Kiefer C, Deal RB, Schmutz J, Grimwood J, Stroud H, et al. On the origin and evolutionary consequences of gene body DNA methylation. Proceedings of the National Academy of Sciences of the United States of America. 113: 9111-6. PMID 27457936 DOI: 10.1073/Pnas.1604666113 |
0.719 |
|
2016 |
Griffin PT, Niederhuth CE, Schmitz RJ. A Comparative Analysis of 5-Azacytidine and Zebularine induced DNA Demethylation. G3 (Bethesda, Md.). PMID 27402357 DOI: 10.1534/G3.116.030262 |
0.677 |
|
2016 |
Bertioli DJ, Cannon SB, Froenicke L, Huang G, Farmer AD, Cannon EK, Liu X, Gao D, Clevenger J, Dash S, Ren L, Moretzsohn MC, Shirasawa K, Huang W, Vidigal B, ... ... Niederhuth CE, et al. The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut. Nature Genetics. PMID 26901068 DOI: 10.1038/Ng.3517 |
0.576 |
|
2015 |
Vlachogiannis G, Niederhuth CE, Tuna S, Stathopoulou A, Viiri K, de Rooij DG, Jenner RG, Schmitz RJ, Ooi SKT. The Dnmt3L ADD Domain Controls Cytosine Methylation Establishment during Spermatogenesis. Cell Reports. 11: 990. PMID 28843284 DOI: 10.1016/j.celrep.2015.04.041 |
0.549 |
|
2015 |
Li J, Hou J, Sun L, Wilkins JM, Lu Y, Niederhuth CE, Merideth BR, Mawhinney TP, Mossine VV, Greenlief CM, Walker JC, Folk WR, Hannink M, Lubahn DB, Birchler JA, et al. From Gigabyte to Kilobyte: A Bioinformatics Protocol for Mining Large RNA-Seq Transcriptomics Data. Plos One. 10: e0125000. PMID 25902288 DOI: 10.1371/Journal.Pone.0125000 |
0.544 |
|
2015 |
Vlachogiannis G, Niederhuth CE, Tuna S, Stathopoulou A, Viiri K, de Rooij DG, Jenner RG, Schmitz RJ, Ooi SK. The Dnmt3L ADD Domain Controls Cytosine Methylation Establishment during Spermatogenesis. Cell Reports. PMID 25683717 DOI: 10.1016/J.Celrep.2015.01.021 |
0.683 |
|
2014 |
Lane AK, Niederhuth CE, Ji L, Schmitz RJ. pENCODE: a plant encyclopedia of DNA elements. Annual Review of Genetics. 48: 49-70. PMID 25149370 DOI: 10.1146/Annurev-Genet-120213-092443 |
0.563 |
|
2014 |
Niederhuth CE, Schmitz RJ. Covering your bases: inheritance of DNA methylation in plant genomes. Molecular Plant. 7: 472-80. PMID 24270503 DOI: 10.1093/Mp/Sst165 |
0.681 |
|
2013 |
Niederhuth CE, Cho SK, Seitz K, Walker JC. Letting go is never easy: Abscission and receptor-like protein kinases Journal of Integrative Plant Biology. 55: 1251-1263. PMID 24138310 DOI: 10.1111/Jipb.12116 |
0.506 |
|
2013 |
Niederhuth CE, Patharkar OR, Walker JC. Transcriptional profiling of the Arabidopsis abscission mutant hae hsl2 by RNA-Seq. Bmc Genomics. 14: 37. PMID 23327667 DOI: 10.1186/1471-2164-14-37 |
0.518 |
|
2012 |
Valdivia ER, Chevalier D, Sampedro J, Taylor I, Niederhuth CE, Walker JC. DVL genes play a role in the coordination of socket cell recruitment and differentiation. Journal of Experimental Botany. 63: 1405-12. PMID 22112938 DOI: 10.1093/Jxb/Err378 |
0.519 |
|
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