Year |
Citation |
Score |
2023 |
Kryshtafovych A, Montelione GT, Rigden DJ, Mesdaghi S, Karaca E, Moult J. Breaking the conformational ensemble barrier: Ensemble structure modeling challenges in CASP15. Proteins. PMID 37872703 DOI: 10.1002/prot.26584 |
0.314 |
|
2023 |
Alexander LT, Durairaj J, Kryshtafovych A, Abriata LA, Bayo Y, Bhabha G, Breyton C, Caulton SG, Chen J, Degroux S, Ekiert DC, Erlandsen BS, Freddolino PL, Gilzer D, Greening C, ... ... Moult J, et al. Protein target highlights in CASP15: Analysis of models by structure providers. Proteins. PMID 37493353 DOI: 10.1002/prot.26545 |
0.352 |
|
2023 |
Herzberg O, Moult J. More than just pattern recognition: Prediction of uncommon protein structure features by AI methods. Proceedings of the National Academy of Sciences of the United States of America. 120: e2221745120. PMID 37399411 DOI: 10.1073/pnas.2221745120 |
0.338 |
|
2021 |
Alexander LT, Lepore R, Kryshtafovych A, Adamopoulos A, Alahuhta M, Arvin AM, Bomble YJ, Böttcher B, Breyton C, Chiarini V, Chinnam NB, Chiu W, Fidelis K, Grinter R, Gupta GD, ... ... Moult J, et al. Target highlights in CASP14: analysis of models by structure providers. Proteins. PMID 34561912 DOI: 10.1002/prot.26247 |
0.309 |
|
2021 |
Kryshtafovych A, Schwede T, Topf M, Fidelis K, Moult J. Critical Assessment of Methods of Protein Structure Prediction (CASP) - Round XIV. Proteins. PMID 34533838 DOI: 10.1002/prot.26237 |
0.36 |
|
2021 |
Kryshtafovych A, Moult J, Billings WM, Della Corte D, Fidelis K, Kwon S, Olechnovič K, Seok C, Venclovas Č, Won J. Modeling SARS-CoV2 proteins in the CASP-commons experiment. Proteins. PMID 34462960 DOI: 10.1002/prot.26231 |
0.341 |
|
2021 |
Kryshtafovych A, Moult J, Albrecht R, Chang GA, Chao K, Fraser A, Greenfield J, Hartmann MD, Herzberg O, Josts I, Leiman PG, Linden SB, Lupas AN, Nelson DC, Rees SD, et al. Computational models in the service of X-ray and cryo-EM structure determination. Proteins. PMID 34449113 DOI: 10.1002/prot.26223 |
0.317 |
|
2019 |
Kryshtafovych A, Schwede T, Topf M, Fidelis K, Moult J. Critical Assessment of Methods of Protein Structure Prediction (CASP) - Round XIII. Proteins. PMID 31589781 DOI: 10.1002/prot.25823 |
0.378 |
|
2019 |
Lepore R, Kryshtafovych A, Alahuhta M, Arora Veraszto H, Bomble YJ, Bufton JC, Bullock AN, Caba C, Cao H, Davies OR, Desfosses A, Dunne M, Fidelis K, Goulding CW, Gurusaran M, ... ... Moult J, et al. Target highlights in CASP13: experimental target structures through the eyes of their authors. Proteins. PMID 31442339 DOI: 10.1002/Prot.25805 |
0.365 |
|
2019 |
Clark WT, Kasak L, Bakolitsa C, Hu Z, Andreoletti G, Babbi G, Bromberg Y, Casadio R, Dunbrack R, Folkman L, Ford CT, Jones D, Katsonis P, Kundu K, Lichtarge O, ... ... Moult J, et al. Assessment of predicted enzymatic activity of alpha-N-acetylglucosaminidase (NAGLU) variants of unknown significance for CAGI 2016. Human Mutation. PMID 31342580 DOI: 10.1002/Humu.23875 |
0.337 |
|
2019 |
Kasak L, Hunter JM, Udani R, Bakolitsa C, Hu Z, Adhikari AN, Babbi G, Casadio R, Gough J, Guerrero RF, Jiang Y, Joseph T, Katsonis P, Kotte S, Kundu K, ... ... Moult J, et al. CAGI SickKids challenges: Assessment of phenotype and variant predictions derived from clinical and genomic data of children with undiagnosed diseases. Human Mutation. PMID 31322791 DOI: 10.1002/Humu.23874 |
0.309 |
|
2019 |
Kasak L, Bakolitsa C, Hu Z, Yu C, Rine J, Dimster-Denk DF, Pandey G, De Baets G, Bromberg Y, Cao C, Capriotti E, Casadio R, Van Durme J, Giollo M, Karchin R, ... ... Moult J, et al. Assessing Computational Predictions of the Phenotypic Effect of Cystathionine-beta-Synthase Variants. Human Mutation. PMID 31301157 DOI: 10.1002/Humu.23868 |
0.359 |
|
2019 |
Monzon AM, Carraro M, Chiricosta L, Reggiani F, Han J, Ozturk K, Wang Y, Miller M, Bromberg Y, Capriotti E, Savojardo C, Babbi G, Martelli PL, Casadio R, Katsonis P, ... ... Moult J, et al. Performance of computational methods for the evaluation of Pericentriolar Material 1 missense variants in CAGI-5. Human Mutation. PMID 31260570 DOI: 10.1002/Humu.23856 |
0.365 |
|
2019 |
Pejaver V, Babbi G, Casadio R, Folkman L, Katsonis P, Kundu K, Lichtarge O, Martelli PL, Miller M, Moult J, Pal LR, Savojardo C, Yin Y, Zhou Y, Radivojac P, et al. Assessment of methods for predicting the effects of PTEN and TPMT protein variants. Human Mutation. PMID 31184403 DOI: 10.1002/Humu.23838 |
0.382 |
|
2019 |
Carraro M, Monzon AM, Chiricosta L, Reggiani F, Aspromonte MC, Bellini M, Pagel K, Jiang Y, Radivojac P, Kundu K, Pal LR, Yin Y, Limongelli I, Andreoletti G, Moult J, et al. Assessment of patient clinical descriptions and pathogenic variants from gene panel sequences in the CAGI-5 intellectual disability challenge. Human Mutation. PMID 31144778 DOI: 10.1002/Humu.23823 |
0.322 |
|
2019 |
McInnes G, Daneshjou R, Katsonis P, Lichtarge O, Srinivasan RG, Rana S, Radivojac P, Mooney SD, Pagel KA, Stamboulian M, Jiang Y, Capriotti E, Wang Y, Bromberg Y, Bovo S, ... ... Moult J, et al. Predicting venous thromboembolism risk from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges. Human Mutation. PMID 31140652 DOI: 10.1002/Humu.23825 |
0.317 |
|
2017 |
Glusman G, Rose PW, Prlić A, Dougherty J, Duarte JM, Hoffman AS, Barton GJ, Bendixen E, Bergquist T, Bock C, Brunk E, Buljan M, Burley SK, Cai B, Carter H, ... ... Moult J, et al. Mapping genetic variations to three-dimensional protein structures to enhance variant interpretation: a proposed framework. Genome Medicine. 9: 113. PMID 29254494 DOI: 10.1186/S13073-017-0509-Y |
0.405 |
|
2017 |
Kryshtafovych A, Monastyrskyy B, Fidelis K, Moult J, Schwede T, Tramontano A. Evaluation of the template-based modeling in CASP12. Proteins. PMID 29159950 DOI: 10.1002/Prot.25425 |
0.409 |
|
2017 |
Moult J, Fidelis K, Kryshtafovych A, Schwede T, Tramontano A. Critical Assessment of Methods of Protein Structure Prediction (CASP) - Round XII. Proteins. PMID 29082672 DOI: 10.1002/prot.25415 |
0.362 |
|
2017 |
Kryshtafovych A, Albrecht R, Baslé A, Bule P, Caputo AT, Carvalho AL, Chao KL, Diskin R, Fidelis K, Fontes CMGA, Fredslund F, Gilbert HJ, Goulding CW, Hartmann MD, Hayes CS, ... ... Moult J, et al. Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016). Proteins. PMID 28960539 DOI: 10.1002/Prot.25392 |
0.357 |
|
2017 |
Daneshjou R, Wang Y, Bromberg Y, Bovo S, Martelli PL, Babbi G, Lena PD, Casadio R, Edwards M, Gifford D, Jones DT, Sundaram L, Bhat R, Li X, Pal LR, ... ... Moult J, et al. Working towards precision medicine: predicting phenotypes from exomes in the Critical Assessment of Genome Interpretation (CAGI) challenges. Human Mutation. PMID 28634997 DOI: 10.1002/Humu.23280 |
0.353 |
|
2017 |
Cai B, Li B, Kiga N, Thusberg J, Bergquist T, Chen YC, Niknafs N, Carter H, Tokheim C, Beleva-Guthrie V, Douville C, Bhattacharya R, Grace Yeo HT, Fan J, Sengupta S, ... ... Moult J, et al. Matching phenotypes to whole genomes: Lessons learned from four iterations of the personal genome project community challenges. Human Mutation. PMID 28544481 DOI: 10.1002/Humu.23265 |
0.312 |
|
2017 |
Yin Y, Kundu K, Pal LR, Moult J. Ensemble variant interpretation methods to predict enzyme activity and assign pathogenicity in the CAGI4 NAGLU (Human N-acetyl-glucosaminidase) and UBE2I (Human SUMO-ligase) challenges. Human Mutation. PMID 28544272 DOI: 10.1002/Humu.23267 |
0.341 |
|
2017 |
Pal LR, Kundu K, Yin Y, Moult J. CAGI4 Crohn's exome challenge: Marker SNP versus exome variant models for assigning risk of Crohn disease. Human Mutation. PMID 28512778 DOI: 10.1002/Humu.23256 |
0.325 |
|
2017 |
Pal LR, Kundu K, Yin Y, Moult J. CAGI4 SickKids clinical genomes challenge: A pipeline for identifying pathogenic variants. Human Mutation. PMID 28512736 DOI: 10.1002/Humu.23257 |
0.304 |
|
2017 |
Kundu K, Pal LR, Yin Y, Moult J. Determination of disease phenotypes and pathogenic variants from exome sequence data in the CAGI 4 gene panel challenge. Human Mutation. PMID 28497567 DOI: 10.1002/Humu.23249 |
0.326 |
|
2017 |
Carraro M, Minervini G, Giollo M, Bromberg Y, Capriotti E, Casadio R, Dunbrack R, Elefanti L, Fariselli P, Ferrari C, Gough J, Katsonis P, Leonardi E, Lichtarge O, Menin C, ... ... Moult J, et al. Performance of in silico tools for the evaluation of p16INK4a (CDKN2A) variants in CAGI. Human Mutation. PMID 28440912 DOI: 10.1002/Humu.23235 |
0.359 |
|
2017 |
Chandonia JM, Adhikari A, Carraro M, Chhibber A, Cutting GR, Fu Y, Gasparini A, Jones DT, Kramer A, Kundu K, Lam HY, Leonardi E, Moult J, Pal LR, Searls DB, et al. 3Lessons from the CAGI-4 Hopkins clinical panel challenge. Human Mutation. PMID 28397312 DOI: 10.1002/Humu.23225 |
0.317 |
|
2016 |
Moult J, Fidelis K, Kryshtafovych A, Schwede T, Tramontano A. Critical assessment of methods of protein structure prediction (CASP) - progress and new directions in Round XI. Proteins. PMID 27171127 DOI: 10.1002/Prot.25064 |
0.456 |
|
2015 |
Kryshtafovych A, Moult J, Baslé A, Burgin A, Craig TK, Edwards RA, Fass D, Hartmann MD, Korycinski M, Lewis RJ, Lorimer D, Lupas AN, Newman J, Peat TS, Piepenbrink KH, et al. Some of the most interesting CASP11 targets through the eyes of their authors. Proteins. PMID 26473983 DOI: 10.1002/Prot.24942 |
0.392 |
|
2015 |
Pal LR, Moult J. Genetic Basis of Common Human Disease: Insight into the Role of Missense SNPs from Genome-Wide Association Studies. Journal of Molecular Biology. 427: 2271-89. PMID 25937569 DOI: 10.1016/J.Jmb.2015.04.014 |
0.306 |
|
2015 |
Heselpoth RD, Yin Y, Moult J, Nelson DC. Increasing the stability of the bacteriophage endolysin PlyC using rationale-based FoldX computational modeling. Protein Engineering, Design & Selection : Peds. 28: 85-92. PMID 25740429 DOI: 10.1093/Protein/Gzv004 |
0.33 |
|
2014 |
Moult J, Fidelis K, Kryshtafovych A, Schwede T, Tramontano A. Critical assessment of methods of protein structure prediction (CASP) - round x Proteins: Structure, Function and Bioinformatics. 82: 1-6. PMID 24344053 DOI: 10.1002/Prot.24452 |
0.465 |
|
2014 |
Kryshtafovych A, Moult J, Bales P, Bazan JF, Biasini M, Burgin A, Chen C, Cochran FV, Craig TK, Das R, Fass D, Garcia-Doval C, Herzberg O, Lorimer D, Luecke H, et al. Challenging the state of the art in protein structure prediction: Highlights of experimental target structures for the 10th Critical Assessment of Techniques for Protein Structure Prediction Experiment CASP10. Proteins. 82: 26-42. PMID 24318984 DOI: 10.1002/Prot.24489 |
0.447 |
|
2014 |
Kryshtafovych A, Fidelis K, Moult J. CASP10 results compared to those of previous CASP experiments Proteins: Structure, Function and Bioinformatics. 82: 164-174. PMID 24150928 DOI: 10.1002/Prot.24448 |
0.415 |
|
2014 |
Monastyrskyy B, Kryshtafovych A, Moult J, Tramontano A, Fidelis K. Assessment of protein disorder region predictions in CASP10 Proteins: Structure, Function and Bioinformatics. 82: 127-137. PMID 23946100 DOI: 10.1002/Prot.24391 |
0.318 |
|
2012 |
Feiglin A, Moult J, Lee B, Ofran Y, Unger R. Neighbor Overlap is enriched in the yeast interaction network: Analysis and implications Plos One. 7. PMID 22761860 DOI: 10.1371/Journal.Pone.0039662 |
0.323 |
|
2012 |
Shi Z, Sellers J, Moult J. Protein stability and in vivo concentration of missense mutations in phenylalanine hydroxylase Proteins: Structure, Function and Bioinformatics. 80: 61-70. PMID 21953985 DOI: 10.1002/Prot.23159 |
0.354 |
|
2011 |
Gorlatova N, Chao K, Pal LR, Araj RH, Galkin A, Turko I, Moult J, Herzberg O. Protein characterization of a candidate mechanism SNP for Crohn's disease: The macrophage stimulating protein R689C substitution Plos One. 6. PMID 22087277 DOI: 10.1371/Journal.Pone.0027269 |
0.335 |
|
2011 |
Kryshtafovych A, Moult J, Bartual SG, Bazan JF, Berman H, Casteel DE, Christodoulou E, Everett JK, Hausmann J, Heidebrecht T, Hills T, Hui R, Hunt JF, Seetharaman J, Joachimiak A, et al. Target highlights in CASP9: Experimental target structures for the critical assessment of techniques for protein structure prediction. Proteins. 79: 6-20. PMID 22020785 DOI: 10.1002/Prot.23196 |
0.434 |
|
2011 |
Moult J, Fidelis K, Kryshtafovych A, Tramontano A. Critical assessment of methods of protein structure prediction (CASP)-round IX Proteins: Structure, Function and Bioinformatics. 79: 1-5. PMID 21997831 DOI: 10.1002/Prot.23200 |
0.458 |
|
2011 |
Kryshtafovych A, Fidelis K, Moult J. CASP9 results compared to those of previous casp experiments Proteins: Structure, Function and Bioinformatics. 79: 196-207. PMID 21997643 DOI: 10.1002/Prot.23182 |
0.359 |
|
2011 |
Monastyrskyy B, Fidelis K, Moult J, Tramontano A, Kryshtafovych A. Evaluation of disorder predictions in CASP9 Proteins: Structure, Function and Bioinformatics. 79: 107-118. PMID 21928402 DOI: 10.1002/Prot.23161 |
0.33 |
|
2011 |
Shi Z, Moult J. Structural and functional impact of cancer-related missense somatic mutations Journal of Molecular Biology. 413: 495-512. PMID 21763698 DOI: 10.1016/J.Jmb.2011.06.046 |
0.333 |
|
2010 |
Lim K, Pullalarevu S, Surabian KT, Howard A, Suzuki T, Moult J, Herzberg O. Structural basis for the mechanism and substrate specificity of glycocyamine kinase, a phosphagen kinase family member Biochemistry. 49: 2031-2041. PMID 20121101 DOI: 10.1021/Bi9020988 |
0.306 |
|
2009 |
Moult J, Fidelis K, Kryshtafovych A, Rost B, Tramontano A. Critical assessment of methods of protein structure prediction - Round VIII. Proteins. 77: 1-4. PMID 19774620 DOI: 10.1002/Prot.22589 |
0.428 |
|
2009 |
Cozzetto D, Kryshtafovych A, Fidelis K, Moult J, Rost B, Tramontano A. Evaluation of template-based models in CASP8 with standard measures. Proteins. 77: 18-28. PMID 19731382 DOI: 10.1002/Prot.22561 |
0.35 |
|
2009 |
Kryshtafovych A, Fidelis K, Moult J. CASPB results in context of previous experiments Proteins: Structure, Function and Bioinformatics. 77: 217-228. PMID 19722266 DOI: 10.1002/Prot.22562 |
0.363 |
|
2009 |
Allali-Hassani A, Wasney GA, Chau I, Hong BS, Senisterra G, Loppnau P, Shi Z, Moult J, Edwards AM, Arrowsmith CH, Park HW, Schapira M, Vedadi M. A survey of proteins encoded by non-synonymous single nucleotide polymorphisms reveals a significant fraction with altered stability and activity Biochemical Journal. 424: 15-26. PMID 19702579 DOI: 10.1042/Bj20090723 |
0.321 |
|
2009 |
Melamud E, Moult J. Structural implication of splicing stochastics Nucleic Acids Research. 37: 4862-4872. PMID 19528068 DOI: 10.1093/Nar/Gkp444 |
0.376 |
|
2009 |
Michino M, Abola E, Brooks CL, Dixon JS, Moult J, Stevens RC. Community-wide assessment of GPCR structure modelling and ligand docking: GPCR Dock 2008. Nature Reviews. Drug Discovery. 8: 455-63. PMID 19461661 DOI: 10.1038/Nrd2877 |
0.389 |
|
2009 |
Schwede T, Sali A, Honig B, Levitt M, Berman HM, Jones D, Brenner SE, Burley SK, Das R, Dokholyan NV, Dunbrack RL, Fidelis K, Fiser A, Godzik A, Huang YJ, ... ... Moult J, et al. Outcome of a workshop on applications of protein models in biomedical research. Structure (London, England : 1993). 17: 151-9. PMID 19217386 DOI: 10.1016/J.Str.2008.12.014 |
0.471 |
|
2008 |
Hodis E, Prilusky J, Martz E, Silman I, Moult J, Sussman JL. Proteopedia - A scientific 'wiki' bridging the rift between three-dimensional structure and function of biomacromolecules Genome Biology. 9. PMID 18673581 DOI: 10.1186/Gb-2008-9-8-R121 |
0.341 |
|
2008 |
Xu Y, Colletier JP, Weik M, Jiang H, Moult J, Silman I, Sussman JL. Flexibility of aromatic residues in the active-site gorge of acetylcholinesterase: X-ray versus molecular dynamics Biophysical Journal. 95: 2500-2511. PMID 18502801 DOI: 10.1529/Biophysj.108.129601 |
0.322 |
|
2008 |
Moult J. Comparative Modeling in Structural Genomics Structure. 16: 14-16. PMID 18184577 DOI: 10.1016/J.Str.2007.12.001 |
0.42 |
|
2008 |
Ramprakash J, Doseeva V, Galkin A, Krajewski W, Muthukumar L, Pullalarevu S, Demirkan E, Herzberg O, Moult J, Schwarz FP. Comparison of the chemical and thermal denaturation of proteins by a two-state transition model Analytical Biochemistry. 374: 221-230. PMID 17964274 DOI: 10.1016/J.Ab.2007.10.005 |
0.339 |
|
2007 |
Moult J, Fidelis K, Kryshtafovych A, Rost B, Hubbard T, Tramontano A. Critical assessment of methods of protein structure prediction-Round VII. Proteins. 69: 3-9. PMID 17918729 DOI: 10.1002/Prot.21767 |
0.437 |
|
2007 |
Kryshtafovych A, Fidelis K, Moult J. Progress from CASP6 to CASP7 Proteins: Structure, Function and Genetics. 69: 194-207. PMID 17918728 DOI: 10.1002/Prot.21769 |
0.378 |
|
2006 |
Berman HM, Burley SK, Chiu W, Sali A, Adzhubei A, Bourne PE, Bryant SH, Dunbrack RL, Fidelis K, Frank J, Godzik A, Henrick K, Joachimiak A, Heymann B, Jones D, ... ... Moult J, et al. Outcome of a Workshop on Archiving Structural Models of Biological Macromolecules Structure. 14: 1211-1217. PMID 16955948 DOI: 10.1016/J.Str.2006.06.005 |
0.322 |
|
2006 |
Yan Y, Moult J. Detection of operons Proteins: Structure, Function and Genetics. 64: 615-628. PMID 16755590 DOI: 10.1002/Prot.21021 |
0.318 |
|
2006 |
Moult J. Rigorous performance evaluation in protein structure modelling and implications for computational biology Philosophical Transactions of the Royal Society B: Biological Sciences. 361: 453-458. PMID 16524833 DOI: 10.1098/Rstb.2005.1810 |
0.427 |
|
2006 |
Yue P, Moult J. Identification and analysis of deleterious human SNPs Journal of Molecular Biology. 356: 1263-1274. PMID 16412461 DOI: 10.1016/J.Jmb.2005.12.025 |
0.333 |
|
2005 |
Kryshtafovych A, Venclovas C, Fidelis K, Moult J. Progress over the first decade of CASP experiments Proteins: Structure, Function and Genetics. 61: 225-236. PMID 16187365 DOI: 10.1002/Prot.20740 |
0.411 |
|
2005 |
Yan Y, Moult J. Protein family clustering for structural genomics Journal of Molecular Biology. 353: 744-759. PMID 16185712 DOI: 10.1016/J.Jmb.2005.08.058 |
0.334 |
|
2005 |
Yue P, Li Z, Moult J. Loss of protein structure stability as a major causative factor in monogenic disease Journal of Molecular Biology. 353: 459-473. PMID 16169011 DOI: 10.1016/J.Jmb.2005.08.020 |
0.341 |
|
2005 |
Moult J. A decade of CASP: Progress, bottlenecks and prognosis in protein structure prediction Current Opinion in Structural Biology. 15: 285-289. PMID 15939584 DOI: 10.1016/J.Sbi.2005.05.011 |
0.434 |
|
2004 |
DeWeese-Scott C, Moult J. Molecular modeling of protein function regions Proteins: Structure, Function and Genetics. 55: 942-961. PMID 15146492 DOI: 10.1002/Prot.10519 |
0.424 |
|
2003 |
Wang Z, Moult J. Three-Dimensional Structural Location and Molecular Functional Effects of Missense SNPs in the T Cell Receptor Vβ Domain Proteins: Structure, Function and Genetics. 53: 748-757. PMID 14579365 DOI: 10.1002/Prot.10522 |
0.323 |
|
2003 |
Venclovas C, Zemla A, Fidelis K, Moult J. Assessment of Progress Over the CASP Experiments Proteins: Structure, Function and Genetics. 53: 585-595. PMID 14579350 DOI: 10.1002/Prot.10530 |
0.393 |
|
2003 |
Melamud E, Moult J. Evaluation of Disorder Predictions in CASP5 Proteins: Structure, Function and Genetics. 53: 561-565. PMID 14579346 DOI: 10.1002/Prot.10533 |
0.349 |
|
2003 |
Janin J, Henrick K, Moult J, Eyck LT, Sternberg MJ, Vajda S, Vakser I, Wodak SJ. CAPRI: a Critical Assessment of PRedicted Interactions. Proteins. 52: 2-9. PMID 12784359 DOI: 10.1002/Prot.10381 |
0.43 |
|
2002 |
Gilliland GL, Teplyakov A, Obmolova G, Tordova M, Thanki N, Ladner J, Herzberg O, Lim K, Zhang H, Huang K, Li Z, Tempczyk A, Krajewski W, Parsons L, Yeh DC, ... ... Moult J, et al. Assisting functional assignment for hypothetical Heamophilus influenzae gene products through structural genomics Current Drug Targets - Infectious Disorders. 2: 339-353. PMID 12570740 DOI: 10.2174/1568005023342281 |
0.41 |
|
2002 |
Coulson AFW, Moult J. A unifold, mesofold, and superfold model of protein fold use Proteins: Structure, Function and Genetics. 46: 61-71. PMID 11746703 DOI: 10.1002/Prot.10011 |
0.356 |
|
2001 |
Venclovas C, Zemla A, Fidelis K, Moult J. Comparison of performance in successive CASP experiments Proteins: Structure, Function and Genetics. 45: 163-170. PMID 11835494 DOI: 10.1002/Prot.10053 |
0.389 |
|
2001 |
Zemla A, Venclovas C, Moult J, Fidelis K. Processing and evaluation of predictions in CASP4 Proteins: Structure, Function and Genetics. 45: 13-21. PMID 11835478 DOI: 10.1002/Prot.10052 |
0.361 |
|
2001 |
Moult J, Fidelis K, Zemla A, Hubbard T. Critical assessment of methods of protein structure prediction (CASP): round IV. Proteins. 2-7. PMID 11835476 DOI: 10.1002/prot.10054 |
0.308 |
|
2001 |
Vitkup D, Melamud E, Moult J, Sander C. Completeness in structural genomics Nature Structural Biology. 8: 559-565. PMID 11373627 DOI: 10.1038/88640 |
0.415 |
|
2001 |
Wang Z, Moult J. SNPs, protein structure, and disease Human Mutation. 17: 263-270. PMID 11295823 DOI: 10.1002/Humu.22 |
0.338 |
|
2000 |
Moult J, Melamud E. From fold to function Current Opinion in Structural Biology. 10: 384-389. PMID 10851191 DOI: 10.1016/S0959-440X(00)00101-9 |
0.426 |
|
2000 |
Moult J. Protein structure prediction Journal of Molecular Graphics & Modelling. 18: 553. DOI: 10.1016/S1093-3263(00)80125-4 |
0.414 |
|
1999 |
Moult J. Predicting protein three-dimensional structure Current Opinion in Biotechnology. 10: 583-588. PMID 10600698 DOI: 10.1016/S0958-1669(99)00037-3 |
0.463 |
|
1999 |
Venclovas C, Zemla A, Fidelis K, Moult J. Some measures of comparative performance in the three CASPs Proteins: Structure, Function and Genetics. 37: 231-237. PMID 10526374 DOI: 10.1002/(Sici)1097-0134(1999)37:3+<231::Aid-Prot30>3.0.Co;2-1 |
0.432 |
|
1999 |
Zemla A, Venclovas C, Moult J, Fidelis K. Processing and analysis of CASP3 protein structure predictions Proteins: Structure, Function and Genetics. 37: 22-29. PMID 10526349 DOI: 10.1002/(Sici)1097-0134(1999)37:3+<22::Aid-Prot5>3.0.Co;2-W |
0.377 |
|
1999 |
Oliva MT, Moult J. Local electrostatic optimization in proteins Protein Engineering. 12: 727-735. PMID 10506282 DOI: 10.1093/Protein/12.9.727 |
0.377 |
|
1998 |
Samudrala R, Moult J. Determinants of side chain conformational preferences in protein structures Protein Engineering. 11: 991-997. PMID 9876919 DOI: 10.1093/Protein/11.11.991 |
0.571 |
|
1998 |
Samudrala R, Moult J. A graph-theoretic algorithm for comparative modeling of protein structure Journal of Molecular Biology. 279: 287-302. PMID 9636717 DOI: 10.1006/Jmbi.1998.1689 |
0.58 |
|
1998 |
Samudrala R, Moult J. An all-atom distance-dependent conditional probability discriminatory function for protein structure prediction Journal of Molecular Biology. 275: 895-916. PMID 9480776 DOI: 10.1006/Jmbi.1997.1479 |
0.568 |
|
1997 |
Pedersen JT, Moult J. Ab initio protein folding simulations with genetic algorithms: Simulations on the complete sequence of small proteins Proteins: Structure, Function and Genetics. 29: 179-184. PMID 9518346 DOI: 10.1002/(Sici)1097-0134(1997)1+<179::Aid-Prot23>3.0.Co;2-K |
0.349 |
|
1997 |
Samudrala R, Moult J. Handling context-sensitivity in protein structures using graph theory: Bona fide prediction Proteins: Structure, Function and Genetics. 29: 43-49. PMID 9485494 DOI: 10.1002/(Sici)1097-0134(1997)1+<43::Aid-Prot7>3.0.Co;2-P |
0.643 |
|
1997 |
Venclovas C, Zemla A, Fidelis K, Moult J. Criteria for evaluating protein structures derived from comparative modeling Proteins: Structure, Function and Genetics. 29: 7-13. PMID 9485490 DOI: 10.1002/(Sici)1097-0134(1997)1+<7::Aid-Prot3>3.0.Co;2-O |
0.435 |
|
1997 |
Moult J, Hubbard T, Bryant SH, Fidelis K, Pedersen JT. Critical assessment of methods of protein structure prediction (CASP): round II. Proteins. 2-6. PMID 9485489 DOI: 10.1002/(Sici)1097-0134(1997)1+<2::Aid-Prot2>3.0.Co;2-T |
0.388 |
|
1997 |
Braxenthaler M, Unger R, Auerbach D, Given JA, Moult J. Chaos in protein dynamics Proteins: Structure, Function and Genetics. 29: 417-425. PMID 9408939 DOI: 10.1002/(Sici)1097-0134(199712)29:4<417::Aid-Prot2>3.0.Co;2-5 |
0.348 |
|
1997 |
Pedersen JT, Moult J. Protein folding simulations with genetic algorithms and a detailed molecular description Journal of Molecular Biology. 269: 240-259. PMID 9191068 DOI: 10.1006/Jmbi.1997.1010 |
0.406 |
|
1997 |
Moult J. Comparison of database potentials and molecular mechanics force fields Current Opinion in Structural Biology. 7: 194-199. PMID 9094335 DOI: 10.1016/S0959-440X(97)80025-5 |
0.304 |
|
1996 |
Moult J. The current state of the art in protein structure prediction Current Opinion in Biotechnology. 7: 422-427. PMID 8768901 DOI: 10.1016/S0958-1669(96)80118-2 |
0.435 |
|
1996 |
Pedersen JT, Moult J. Genetic algorithms for protein structure prediction Current Opinion in Structural Biology. 6: 227-231. PMID 8728656 DOI: 10.1016/S0959-440X(96)80079-0 |
0.421 |
|
1995 |
Pedersen JT, Moult J. Ab initio structure prediction for small polypeptides and protein fragments using genetic algorithms Proteins: Structure, Function and Genetics. 23: 454-460. PMID 8710838 DOI: 10.1002/Prot.340230319 |
0.377 |
|
1995 |
Samudrala R, Pedersen JT, Zhou HB, Luo R, Fidelis K, Moult J. Confronting the problem of interconnected structural changes in the comparative modeling of proteins Proteins: Structure, Function and Genetics. 23: 327-336. PMID 8710826 DOI: 10.1002/Prot.340230307 |
0.641 |
|
1995 |
Moult J, Pedersen JT, Judson R, Fidelis K. A large-scale experiment to assess protein structure prediction methods Proteins: Structure, Function and Genetics. 23: ii-iv. PMID 8710822 DOI: 10.1002/Prot.340230303 |
0.386 |
|
1995 |
Avbelj F, Moult J. Determination of the conformation of folding initiation sites in proteins by computer simulation Proteins: Structure, Function and Genetics. 23: 129-141. PMID 8592695 DOI: 10.1002/Prot.340230203 |
0.386 |
|
1995 |
Avbelj F, Moult J. Role of electrostatic screening in determining protein main chain conformational preferences. Biochemistry. 34: 755-64. PMID 7827034 DOI: 10.1021/Bi00003A008 |
0.373 |
|
1995 |
Braxenthaler M, Avbelj F, Moult J. Structure, dynamics and energetics of initiation sites in protein folding: I. Analysis of a 1 ns molecular dynamics trajectory of an early folding unit in water: The helix I/loop I-fragment of barnase Journal of Molecular Biology. 250: 239-257. PMID 7608973 DOI: 10.1006/Jmbi.1995.0374 |
0.334 |
|
1994 |
Fidelis K, Stern PS, Bacon D, Moult J. Comparison of systematic search and database methods for constructing segments of protein structure Protein Engineering. 7: 953-960. PMID 7809034 DOI: 10.1093/Protein/7.8.953 |
0.384 |
|
1993 |
Unger R, Moult J. Genetic algorithms for protein folding simulations Journal of Molecular Biology. 231: 75-81. PMID 8496967 DOI: 10.1006/Jmbi.1993.1258 |
0.314 |
|
1993 |
Kitson DH, Avbelj F, Moult J, Nguyen DT, Mertz JE, Hadzi D, Hagler AT. On achieving better than 1-A accuracy in a simulation of a large protein: Streptomyces griseus protease A. Proceedings of the National Academy of Sciences of the United States of America. 90: 8920-4. PMID 8415632 DOI: 10.1073/Pnas.90.19.8920 |
0.372 |
|
1993 |
Unger R, Moult J. Finding the lowest free energy conformation of a protein is an NP-hard problem: Proof and implications Bulletin of Mathematical Biology. 55: 1183-1198. PMID 8281131 DOI: 10.1016/S0092-8240(05)80169-7 |
0.304 |
|
1993 |
Kitson D, Avbelj F, Moult J, Nguyen D, Mertz J, Hadzi D, Hagler A. An accurate simulation of the protein Streptomyces griseus protease A Journal of Molecular Graphics. 11: 62-63. DOI: 10.1016/0263-7855(93)85027-N |
0.309 |
|
1992 |
Bacon DJ, Moult J. Docking by least-squares fitting of molecular surface patterns. Journal of Molecular Biology. 225: 849-58. PMID 1602486 DOI: 10.1016/0022-2836(92)90405-9 |
0.316 |
|
1992 |
Moult J. Electrostatics. Current Opinion in Structural Biology 1992, 2:223-229 Current Opinion in Structural Biology. 2: 223-229. DOI: 10.1016/0959-440X(92)90150-6 |
0.361 |
|
1991 |
Moult J, Unger R. An analysis of protein folding pathways. Biochemistry. 30: 3816-24. PMID 2018757 DOI: 10.1021/Bi00230A003 |
0.396 |
|
1991 |
Herzberg O, Moult J. Analysis of the steric strain in the polypeptide backbone of protein molecules. Proteins. 11: 223-9. PMID 1749775 DOI: 10.1002/Prot.340110307 |
0.314 |
|
1990 |
Avbelj F, Moult J, Kitson DH, James MN, Hagler AT. Molecular dynamics study of the structure and dynamics of a protein molecule in a crystalline ionic environment, Streptomyces griseus protease A. Biochemistry. 29: 8658-76. PMID 2125469 DOI: 10.1021/Bi00489A023 |
0.377 |
|
1989 |
Moult J. Comparative Modeling of Protein Structure-Progress and Prospects. Journal of Research of the National Institute of Standards and Technology. 94: 79-84. PMID 28053401 DOI: 10.6028/Jres.094.010 |
0.433 |
|
1984 |
Moult J, Sielecki AR, James MNG. Analysis and prediction of solvent structures in protein crystals Acta Crystallographica Section A. 40. DOI: 10.1107/S0108767384098147 |
0.378 |
|
1979 |
Shoham M, Yonath A, Sussman JL, Moult J, Traub W, Kalb AJ. Crystal structure of demetallized concanavalin A: the metal-binding region. Journal of Molecular Biology. 131: 137-55. PMID 490645 DOI: 10.1016/0022-2836(79)90070-6 |
0.333 |
|
1978 |
Hagler AT, Moult J. Computer simulation of the solvent structure around biological macromolecules Nature. 272: 222-226. PMID 628447 DOI: 10.1038/272222A0 |
0.324 |
|
1976 |
Moult J, Yonath A, Traub W, Smilansky A, Podjarny A, Rabinovich D, Saya A. The structure of triclinic lysozyme at 2.5 Å resolution Journal of Molecular Biology. 100: 179-195. PMID 1255711 DOI: 10.1016/S0022-2836(76)80147-7 |
0.344 |
|
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