| Year |
Citation |
Score |
| 2023 |
Ringbauer H, Huang Y, Akbari A, Mallick S, Olalde I, Patterson N, Reich D. Accurate detection of identity-by-descent segments in human ancient DNA. Nature Genetics. PMID 38123640 DOI: 10.1038/s41588-023-01582-w |
0.507 |
|
| 2023 |
Nikitin AG, Videiko M, Patterson N, Renson V, Reich D. Interactions between Trypillian farmers and North Pontic forager-pastoralists in Eneolithic central Ukraine. Plos One. 18: e0285449. PMID 37314969 DOI: 10.1371/journal.pone.0285449 |
0.499 |
|
| 2023 |
Mallick S, Micco A, Mah M, Ringbauer H, Lazaridis I, Olalde I, Patterson N, Reich D. The Allen Ancient DNA Resource (AADR): A curated compendium of ancient human genomes. Biorxiv : the Preprint Server For Biology. PMID 37066305 DOI: 10.1101/2023.04.06.535797 |
0.526 |
|
| 2023 |
Brielle ES, Fleisher J, Wynne-Jones S, Sirak K, Broomandkhoshbacht N, Callan K, Curtis E, Iliev L, Lawson AM, Oppenheimer J, Qiu L, Stewardson K, Workman JN, Zalzala F, Ayodo G, ... ... Patterson N, et al. Entwined African and Asian genetic roots of medieval peoples of the Swahili coast. Nature. 615: 866-873. PMID 36991187 DOI: 10.1038/s41586-023-05754-w |
0.505 |
|
| 2023 |
Ringbauer H, Huang Y, Akbari A, Mallick S, Patterson N, Reich D. ancIBD - Screening for identity by descent segments in human ancient DNA. Biorxiv : the Preprint Server For Biology. PMID 36945531 DOI: 10.1101/2023.03.08.531671 |
0.546 |
|
| 2022 |
Rohland N, Mallick S, Mah M, Maier R, Patterson N, Reich D. Three assays for in-solution enrichment of ancient human DNA at more than a million SNPs. Genome Research. PMID 36517229 DOI: 10.1101/gr.276728.122 |
0.486 |
|
| 2022 |
Gretzinger J, Sayer D, Justeau P, Altena E, Pala M, Dulias K, Edwards CJ, Jodoin S, Lacher L, Sabin S, Vågene ÅJ, Haak W, Ebenesersdóttir SS, Moore KHS, Radzeviciute R, ... ... Patterson N, et al. Author Correction: The Anglo-Saxon migration and the formation of the early English gene pool. Nature. PMID 36253469 DOI: 10.1038/s41586-022-05429-y |
0.431 |
|
| 2022 |
Reitsema LJ, Mittnik A, Kyle B, Catalano G, Fabbri PF, Kazmi ACS, Reinberger KL, Sineo L, Vassallo S, Bernardos R, Broomandkhoshbacht N, Callan K, Candilio F, Cheronet O, Curtis E, ... ... Patterson N, et al. The diverse genetic origins of a Classical period Greek army. Proceedings of the National Academy of Sciences of the United States of America. 119: e2205272119. PMID 36191217 DOI: 10.1073/pnas.2205272119 |
0.587 |
|
| 2022 |
Gretzinger J, Sayer D, Justeau P, Altena E, Pala M, Dulias K, Edwards CJ, Jodoin S, Lacher L, Sabin S, Vågene ÅJ, Haak W, Ebenesersdóttir SS, Moore KHS, Radzeviciute R, ... ... Patterson N, et al. The Anglo-Saxon migration and the formation of the early English gene pool. Nature. PMID 36131019 DOI: 10.1038/s41586-022-05247-2 |
0.557 |
|
| 2022 |
Lazaridis I, Alpaslan-Roodenberg S, Acar A, Açıkkol A, Agelarakis A, Aghikyan L, Akyüz U, Andreeva D, Andrijašević G, Antonović D, Armit I, Atmaca A, Avetisyan P, Aytek Aİ, Bacvarov K, ... ... Patterson N, et al. The genetic history of the Southern Arc: A bridge between West Asia and Europe. Science (New York, N.Y.). 377: eabm4247. PMID 36007055 DOI: 10.1126/science.abm4247 |
0.514 |
|
| 2022 |
Lazaridis I, Alpaslan-Roodenberg S, Acar A, Açıkkol A, Agelarakis A, Aghikyan L, Akyüz U, Andreeva D, Andrijašević G, Antonović D, Armit I, Atmaca A, Avetisyan P, Aytek Aİ, Bacvarov K, ... ... Patterson N, et al. Ancient DNA from Mesopotamia suggests distinct Pre-Pottery and Pottery Neolithic migrations into Anatolia. Science (New York, N.Y.). 377: 982-987. PMID 36007054 DOI: 10.1126/science.abq0762 |
0.521 |
|
| 2022 |
Lazaridis I, Alpaslan-Roodenberg S, Acar A, Açıkkol A, Agelarakis A, Aghikyan L, Akyüz U, Andreeva D, Andrijašević G, Antonović D, Armit I, Atmaca A, Avetisyan P, Aytek Aİ, Bacvarov K, ... ... Patterson N, et al. A genetic probe into the ancient and medieval history of Southern Europe and West Asia. Science (New York, N.Y.). 377: 940-951. PMID 36007020 DOI: 10.1126/science.abq0755 |
0.565 |
|
| 2022 |
Liu YC, Hunter-Anderson R, Cheronet O, Eakin J, Camacho F, Pietrusewsky M, Rohland N, Ioannidis A, Athens JS, Douglas MT, Ikehara-Quebral RM, Bernardos R, Culleton BJ, Mah M, Adamski N, ... ... Patterson N, et al. Ancient DNA reveals five streams of migration into Micronesia and matrilocality in early Pacific seafarers. Science (New York, N.Y.). 377: 72-79. PMID 35771911 DOI: 10.1126/science.abm6536 |
0.523 |
|
| 2022 |
Chintalapati M, Patterson N, Moorjani P. The spatiotemporal patterns of major human admixture events during the European Holocene. Elife. 11. PMID 35635751 DOI: 10.7554/eLife.77625 |
0.77 |
|
| 2022 |
Wohns AW, Wong Y, Jeffery B, Akbari A, Mallick S, Pinhasi R, Patterson N, Reich D, Kelleher J, McVean G. A unified genealogy of modern and ancient genomes. Science (New York, N.Y.). 375: eabi8264. PMID 35201891 DOI: 10.1126/science.abi8264 |
0.574 |
|
| 2022 |
Lipson M, Sawchuk EA, Thompson JC, Oppenheimer J, Tryon CA, Ranhorn KL, de Luna KM, Sirak KA, Olalde I, Ambrose SH, Arthur JW, Arthur KJW, Ayodo G, Bertacchi A, Cerezo-Román JI, ... ... Patterson N, et al. Ancient DNA and deep population structure in sub-Saharan African foragers. Nature. PMID 35197631 DOI: 10.1038/s41586-022-04430-9 |
0.601 |
|
| 2021 |
Patterson N, Isakov M, Booth T, Büster L, Fischer CE, Olalde I, Ringbauer H, Akbari A, Cheronet O, Bleasdale M, Adamski N, Altena E, Bernardos R, Brace S, Broomandkhoshbacht N, et al. Large-scale migration into Britain during the Middle to Late Bronze Age. Nature. PMID 34937049 DOI: 10.1038/s41586-021-04287-4 |
0.52 |
|
| 2021 |
Sirak KA, Fernandes DM, Lipson M, Mallick S, Mah M, Olalde I, Ringbauer H, Rohland N, Hadden CS, Harney É, Adamski N, Bernardos R, Broomandkhoshbacht N, Callan K, Ferry M, ... ... Patterson N, et al. Social stratification without genetic differentiation at the site of Kulubnarti in Christian Period Nubia. Nature Communications. 12: 7283. PMID 34907168 DOI: 10.1038/s41467-021-27356-8 |
0.54 |
|
| 2021 |
Alpaslan-Roodenberg S, Anthony D, Babiker H, Bánffy E, Booth T, Capone P, Deshpande-Mukherjee A, Eisenmann S, Fehren-Schmitz L, Frachetti M, Fujita R, Frieman CJ, Fu Q, Gibbon V, Haak W, ... ... Patterson N, et al. Ethics of DNA research on human remains: five globally applicable guidelines. Nature. 599: 41-46. PMID 34671160 DOI: 10.1038/s41586-021-04008-x |
0.429 |
|
| 2021 |
Sedig JW, Olade I, Patterson N, Harney É, Reich D. COMBINING ANCIENT DNA AND RADIOCARBON DATING DATA TO INCREASE CHRONOLOGICAL ACCURACY. Journal of Archaeological Science. 133. PMID 34483440 DOI: 10.1016/j.jas.2021.105452 |
0.475 |
|
| 2021 |
Harney É, Patterson N, Reich D, Wakeley J. Assessing the performance of qpAdm: a statistical tool for studying population admixture. Genetics. 217. PMID 33772284 DOI: 10.1093/genetics/iyaa045 |
0.564 |
|
| 2020 |
Nakatsuka N, Patterson N, Patsopoulos NA, Altemose N, Tandon A, Beecham AH, McCauley JL, Isobe N, Hauser S, De Jager PL, Hafler DA, Oksenberg JR, Reich D. Two genetic variants explain the association of European ancestry with multiple sclerosis risk in African-Americans. Scientific Reports. 10: 16902. PMID 33037294 DOI: 10.1038/s41598-020-74035-7 |
0.53 |
|
| 2020 |
Nakatsuka N, Harney É, Mallick S, Mah M, Patterson N, Reich D. ContamLD: estimation of ancient nuclear DNA contamination using breakdown of linkage disequilibrium. Genome Biology. 21: 199. PMID 32778142 DOI: 10.1186/S13059-020-02111-2 |
0.524 |
|
| 2020 |
Hujoel MLA, Gazal S, Loh PR, Patterson N, Price AL. Liability threshold modeling of case-control status and family history of disease increases association power. Nature Genetics. PMID 32313248 DOI: 10.1038/S41588-020-0613-6 |
0.334 |
|
| 2020 |
Fernandes DM, Mittnik A, Olalde I, Lazaridis I, Cheronet O, Rohland N, Mallick S, Bernardos R, Broomandkhoshbacht N, Carlsson J, Culleton BJ, Ferry M, Gamarra B, Lari M, Mah M, ... ... Patterson N, et al. Author Correction: The spread of steppe and Iranian-related ancestry in the islands of the western Mediterranean. Nature Ecology & Evolution. PMID 32296139 DOI: 10.1038/S41559-020-1197-3 |
0.483 |
|
| 2020 |
Fernandes DM, Mittnik A, Olalde I, Lazaridis I, Cheronet O, Rohland N, Mallick S, Bernardos R, Broomandkhoshbacht N, Carlsson J, Culleton BJ, Ferry M, Gamarra B, Lari M, Mah M, ... ... Patterson N, et al. The spread of steppe and Iranian-related ancestry in the islands of the western Mediterranean. Nature Ecology & Evolution. PMID 32094539 DOI: 10.1038/S41559-020-1102-0 |
0.651 |
|
| 2020 |
Lipson M, Ribot I, Mallick S, Rohland N, Olalde I, Adamski N, Broomandkhoshbacht N, Lawson AM, López S, Oppenheimer J, Stewardson K, Asombang RN, Bocherens H, Bradman N, Culleton BJ, ... ... Patterson N, et al. Ancient West African foragers in the context of African population history. Nature. PMID 31969706 DOI: 10.1038/S41586-020-1929-1 |
0.653 |
|
| 2019 |
Maier R, Akbari A, Wei X, Patterson N, Nielsen R, Reich D. No statistical evidence for an effect of CCR5-∆32 on lifespan in the UK Biobank cohort. Nature Medicine. PMID 31873311 DOI: 10.1038/S41591-019-0710-1 |
0.475 |
|
| 2019 |
Edelman NB, Frandsen PB, Miyagi M, Clavijo B, Davey J, Dikow RB, García-Accinelli G, Van Belleghem SM, Patterson N, Neafsey DE, Challis R, Kumar S, Moreira GRP, Salazar C, Chouteau M, et al. Genomic architecture and introgression shape a butterfly radiation. Science (New York, N.Y.). 366: 594-599. PMID 31672890 DOI: 10.1126/Science.Aaw2090 |
0.421 |
|
| 2019 |
Fan S, Kelly DE, Beltrame MH, Hansen MEB, Mallick S, Ranciaro A, Hirbo J, Thompson S, Beggs W, Nyambo T, Omar SA, Meskel DW, Belay G, Froment A, Patterson N, et al. Correction to: African evolutionary history inferred from whole genome sequence data of 44 indigenous African populations. Genome Biology. 20: 204. PMID 31597575 DOI: 10.1186/S13059-019-1821-1 |
0.572 |
|
| 2019 |
Shinde V, Narasimhan VM, Rohland N, Mallick S, Mah M, Lipson M, Nakatsuka N, Adamski N, Broomandkhoshbacht N, Ferry M, Lawson AM, Michel M, Oppenheimer J, Stewardson K, Jadhav N, ... ... Patterson N, et al. An Ancient Harappan Genome Lacks Ancestry from Steppe Pastoralists or Iranian Farmers. Cell. PMID 31495572 DOI: 10.1016/J.Cell.2019.08.048 |
0.634 |
|
| 2019 |
Narasimhan VM, Patterson N, Moorjani P, Rohland N, Bernardos R, Mallick S, Lazaridis I, Nakatsuka N, Olalde I, Lipson M, Kim AM, Olivieri LM, Coppa A, Vidale M, Mallory J, et al. The formation of human populations in South and Central Asia. Science (New York, N.Y.). 365. PMID 31488661 DOI: 10.1126/Science.Aat7487 |
0.795 |
|
| 2019 |
Harney É, Nayak A, Patterson N, Joglekar P, Mushrif-Tripathy V, Mallick S, Rohland N, Sedig J, Adamski N, Bernardos R, Broomandkhoshbacht N, Culleton BJ, Ferry M, Harper TK, Michel M, et al. Ancient DNA from the skeletons of Roopkund Lake reveals Mediterranean migrants in India. Nature Communications. 10: 3670. PMID 31431628 DOI: 10.1038/S41467-019-11357-9 |
0.571 |
|
| 2019 |
O'Connor LJ, Schoech AP, Hormozdiari F, Gazal S, Patterson N, Price AL. Extreme Polygenicity of Complex Traits Is Explained by Negative Selection. American Journal of Human Genetics. PMID 31402091 DOI: 10.1016/J.Ajhg.2019.07.003 |
0.387 |
|
| 2019 |
Fan S, Kelly DE, Beltrame MH, Hansen MEB, Mallick S, Ranciaro A, Hirbo J, Thompson S, Beggs W, Nyambo T, Omar SA, Meskel DW, Belay G, Froment A, Patterson N, et al. African evolutionary history inferred from whole genome sequence data of 44 indigenous African populations. Genome Biology. 20: 82. PMID 31023338 DOI: 10.1186/S13059-019-1679-2 |
0.655 |
|
| 2019 |
Sohail M, Maier RM, Ganna A, Bloemendal A, Martin AR, Turchin MC, Chiang CW, Hirschhorn J, Daly MJ, Patterson N, Neale B, Mathieson I, Reich D, Sunyaev SR. Polygenic adaptation on height is overestimated due to uncorrected stratification in genome-wide association studies. Elife. 8. PMID 30895926 DOI: 10.7554/Elife.39702 |
0.637 |
|
| 2019 |
Olalde I, Mallick S, Patterson N, Rohland N, Villalba-Mouco V, Silva M, Dulias K, Edwards CJ, Gandini F, Pala M, Soares P, Ferrando-Bernal M, Adamski N, Broomandkhoshbacht N, Cheronet O, et al. The genomic history of the Iberian Peninsula over the past 8000 years. Science (New York, N.Y.). 363: 1230-1234. PMID 30872528 DOI: 10.1126/Science.Aav4040 |
0.631 |
|
| 2018 |
Galinsky KJ, Reshef YA, Finucane HK, Loh PR, Zaitlen N, Patterson NJ, Brown BC, Price AL. Estimating cross-population genetic correlations of causal effect sizes. Genetic Epidemiology. PMID 30474154 DOI: 10.1002/Gepi.22173 |
0.361 |
|
| 2018 |
Posth C, Nakatsuka N, Lazaridis I, Skoglund P, Mallick S, Lamnidis TC, Rohland N, Nägele K, Adamski N, Bertolini E, Broomandkhoshbacht N, Cooper A, Culleton BJ, Ferraz T, Ferry M, ... ... Patterson N, et al. Reconstructing the Deep Population History of Central and South America. Cell. PMID 30415837 DOI: 10.1016/J.Cell.2018.10.027 |
0.664 |
|
| 2018 |
Harney É, May H, Shalem D, Rohland N, Mallick S, Lazaridis I, Sarig R, Stewardson K, Nordenfelt S, Patterson N, Hershkovitz I, Reich D. Publisher Correction: Ancient DNA from Chalcolithic Israel reveals the role of population mixture in cultural transformation. Nature Communications. 9: 3913. PMID 30237547 DOI: 10.1038/S41467-018-06484-8 |
0.443 |
|
| 2018 |
Reshef YA, Finucane HK, Kelley DR, Gusev A, Kotliar D, Ulirsch JC, Hormozdiari F, Nasser J, O'Connor L, van de Geijn B, Loh PR, Grossman SR, Bhatia G, Gazal S, Palamara PF, ... ... Patterson N, et al. Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk. Nature Genetics. PMID 30177862 DOI: 10.1038/S41588-018-0196-7 |
0.367 |
|
| 2018 |
Harney É, May H, Shalem D, Rohland N, Mallick S, Lazaridis I, Sarig R, Stewardson K, Nordenfelt S, Patterson N, Hershkovitz I, Reich D. Ancient DNA from Chalcolithic Israel reveals the role of population mixture in cultural transformation. Nature Communications. 9: 3336. PMID 30127404 DOI: 10.1038/S41467-018-05649-9 |
0.554 |
|
| 2018 |
Skoglund P, Mallick S, Patterson N, Reich D. No evidence for unknown archaic ancestry in South Asia. Nature Genetics. PMID 29700470 DOI: 10.1038/S41588-018-0097-9 |
0.533 |
|
| 2018 |
Olalde I, Brace S, Allentoft ME, Armit I, Kristiansen K, Booth T, Rohland N, Mallick S, Szécsényi-Nagy A, Mittnik A, Altena E, Lipson M, Lazaridis I, Harper TK, Patterson N, et al. Erratum: The Beaker phenomenon and the genomic transformation of northwest Europe. Nature. 555: 543. PMID 29565364 DOI: 10.1038/nature26164 |
0.465 |
|
| 2018 |
Hajdinjak M, Fu Q, Hübner A, Petr M, Mafessoni F, Grote S, Skoglund P, Narasimham V, Rougier H, Crevecoeur I, Semal P, Soressi M, Talamo S, Hublin JJ, Gušić I, ... ... Patterson N, et al. Reconstructing the genetic history of late Neanderthals. Nature. PMID 29562232 DOI: 10.1038/Nature26151 |
0.655 |
|
| 2018 |
Olalde I, Brace S, Allentoft ME, Armit I, Kristiansen K, Booth T, Rohland N, Mallick S, Szécsényi-Nagy A, Mittnik A, Altena E, Lipson M, Lazaridis I, Harper TK, Patterson N, et al. The Beaker phenomenon and the genomic transformation of northwest Europe. Nature. PMID 29466337 DOI: 10.1038/nature25738 |
0.538 |
|
| 2018 |
Mathieson I, Alpaslan-Roodenberg S, Posth C, Szécsényi-Nagy A, Rohland N, Mallick S, Olalde I, Broomandkhoshbacht N, Candilio F, Cheronet O, Fernandes D, Ferry M, Gamarra B, Fortes GG, Haak W, ... ... Patterson N, et al. The genomic history of southeastern Europe. Nature. PMID 29466330 DOI: 10.1038/Nature25778 |
0.663 |
|
| 2018 |
Sohail M, Maier RM, Ganna A, Bloemendal A, Martin AR, Turchin MC, Chiang CW, Hirschhorn J, Daly MJ, Patterson N, Neale B, Mathieson I, Reich D, Sunyaev SR. Author response: Polygenic adaptation on height is overestimated due to uncorrected stratification in genome-wide association studies Elife. DOI: 10.7554/Elife.39702.042 |
0.551 |
|
| 2018 |
Klejn LS, Haak W, Lazaridis I, Patterson N, Reich D, Kristiansen K, Sjögren K, Allentoft M, Sikora M, Willerslev E. Are the origins of Indo-European languages explained by the migration of the Yamnaya culture to the west? European Journal of Archaeology. 21: 3-17. DOI: 10.1017/Eaa.2017.35 |
0.523 |
|
| 2017 |
Prüfer K, de Filippo C, Grote S, Mafessoni F, Korlević P, Hajdinjak M, Vernot B, Skov L, Hsieh P, Peyrégne S, Reher D, Hopfe C, Nagel S, Maricic T, Fu Q, ... ... Patterson N, et al. A high-coverage Neandertal genome from Vindija Cave in Croatia. Science (New York, N.Y.). PMID 28982794 DOI: 10.1126/Science.Aao1887 |
0.605 |
|
| 2017 |
Skoglund P, Thompson JC, Prendergast ME, Mittnik A, Sirak K, Hajdinjak M, Salie T, Rohland N, Mallick S, Peltzer A, Heinze A, Olalde I, Ferry M, Harney E, Michel M, ... ... Patterson N, et al. Reconstructing Prehistoric African Population Structure. Cell. 171: 59-71.e21. PMID 28938123 DOI: 10.1016/J.Cell.2017.08.049 |
0.661 |
|
| 2017 |
Lazaridis I, Mittnik A, Patterson N, Mallick S, Rohland N, Pfrengle S, Furtwängler A, Peltzer A, Posth C, Vasilakis A, McGeorge PJP, Konsolaki-Yannopoulou E, Korres G, Martlew H, Michalodimitrakis M, et al. Genetic origins of the Minoans and Mycenaeans. Nature. PMID 28783727 DOI: 10.1038/Nature23310 |
0.654 |
|
| 2017 |
Nakatsuka N, Moorjani P, Rai N, Sarkar B, Tandon A, Patterson N, Bhavani GS, Girisha KM, Mustak MS, Srinivasan S, Kaushik A, Vahab SA, Jagadeesh SM, Satyamoorthy K, Singh L, et al. The promise of discovering population-specific disease-associated genes in South Asia. Nature Genetics. PMID 28714977 DOI: 10.1038/Ng.3917 |
0.784 |
|
| 2016 |
Galinsky KJ, Loh PR, Mallick S, Patterson NJ, Price AL. Population Structure of UK Biobank and Ancient Eurasians Reveals Adaptation at Genes Influencing Blood Pressure. American Journal of Human Genetics. PMID 27773431 DOI: 10.1016/j.ajhg.2016.09.014 |
0.339 |
|
| 2016 |
Majithia AR, Tsuda B, Agostini M, Gnanapradeepan K, Rice R, Peloso G, Patel KA, Zhang X, Broekema MF, Patterson N, Duby M, Sharpe T, Kalkhoven E, Rosen ED, Barroso I, et al. Prospective functional classification of all possible missense variants in PPARG. Nature Genetics. PMID 27749844 DOI: 10.1038/Ng.3700 |
0.354 |
|
| 2016 |
Skoglund P, Posth C, Sirak K, Spriggs M, Valentin F, Bedford S, Clark GR, Reepmeyer C, Petchey F, Fernandes D, Fu Q, Harney E, Lipson M, Mallick S, Novak M, ... ... Patterson N, et al. Genomic insights into the peopling of the Southwest Pacific. Nature. PMID 27698418 DOI: 10.1038/Nature19844 |
0.654 |
|
| 2016 |
Mallick S, Li H, Lipson M, Mathieson I, Gymrek M, Racimo F, Zhao M, Chennagiri N, Nordenfelt S, Tandon A, Skoglund P, Lazaridis I, Sankararaman S, Fu Q, Rohland N, ... ... Patterson N, et al. The Simons Genome Diversity Project: 300 genomes from 142 diverse populations. Nature. PMID 27654912 DOI: 10.1038/Nature18964 |
0.647 |
|
| 2016 |
Lazaridis I, Nadel D, Rollefson G, Merrett DC, Rohland N, Mallick S, Fernandes D, Novak M, Gamarra B, Sirak K, Connell S, Stewardson K, Harney E, Fu Q, Gonzalez-Fortes G, ... ... Patterson N, et al. Genomic insights into the origin of farming in the ancient Near East. Nature. PMID 27459054 DOI: 10.1038/Nature19310 |
0.647 |
|
| 2016 |
Moorjani P, Sankararaman S, Fu Q, Przeworski M, Patterson N, Reich D. A genetic method for dating ancient genomes provides a direct estimate of human generation interval in the last 45,000 years. Proceedings of the National Academy of Sciences of the United States of America. PMID 27140627 DOI: 10.1073/Pnas.1514696113 |
0.82 |
|
| 2016 |
Fu Q, Posth C, Hajdinjak M, Petr M, Mallick S, Fernandes D, Furtwängler A, Haak W, Meyer M, Mittnik A, Nickel B, Peltzer A, Rohland N, Slon V, Talamo S, ... ... Patterson N, et al. The genetic history of Ice Age Europe. Nature. PMID 27135931 DOI: 10.1038/Nature17993 |
0.633 |
|
| 2016 |
Sankararaman S, Mallick S, Patterson N, Reich D. The Combined Landscape of Denisovan and Neanderthal Ancestry in Present-Day Humans. Current Biology : Cb. PMID 27032491 DOI: 10.1016/J.Cub.2016.03.037 |
0.63 |
|
| 2016 |
Hellenthal G, Falush D, Myers S, Reich D, Busby GB, Lipson M, Capelli C, Patterson N. The Kalash Genetic Isolate? The Evidence for Recent Admixture. American Journal of Human Genetics. 98: 396-7. PMID 26849116 DOI: 10.1016/J.Ajhg.2015.12.025 |
0.573 |
|
| 2015 |
Mathieson I, Lazaridis I, Rohland N, Mallick S, Patterson N, Roodenberg SA, Harney E, Stewardson K, Fernandes D, Novak M, Sirak K, Gamba C, Jones ER, Llamas B, Dryomov S, et al. Genome-wide patterns of selection in 230 ancient Eurasians. Nature. PMID 26595274 DOI: 10.1038/Nature16152 |
0.608 |
|
| 2015 |
Lipson M, Loh PR, Sankararaman S, Patterson N, Berger B, Reich D. Calibrating the Human Mutation Rate via Ancestral Recombination Density in Diploid Genomes. Plos Genetics. 11: e1005550. PMID 26562831 DOI: 10.1371/Journal.Pgen.1005550 |
0.569 |
|
| 2015 |
Loh PR, Bhatia G, Gusev A, Finucane HK, Bulik-Sullivan BK, Pollack SJ, de Candia TR, Lee SH, Wray NR, Kendler KS, O'Donovan MC, Neale BM, Patterson N, Price AL. Contrasting genetic architectures of schizophrenia and other complex diseases using fast variance-components analysis. Nature Genetics. PMID 26523775 DOI: 10.1038/Ng.3431 |
0.356 |
|
| 2015 |
Finucane HK, Bulik-Sullivan B, Gusev A, Trynka G, Reshef Y, Loh PR, Anttila V, Xu H, Zang C, Farh K, Ripke S, Day FR, ... ... Patterson N, et al. Partitioning heritability by functional annotation using genome-wide association summary statistics. Nature Genetics. PMID 26414678 DOI: 10.1038/Ng.3404 |
0.398 |
|
| 2015 |
Bulik-Sullivan B, Finucane HK, Anttila V, Gusev A, Day FR, Loh PR, Duncan L, Perry JR, Patterson N, Robinson EB, Daly MJ, Price AL, et al. An atlas of genetic correlations across human diseases and traits. Nature Genetics. PMID 26414676 DOI: 10.1038/Ng.3406 |
0.422 |
|
| 2015 |
Sudmant PH, Mallick S, Nelson BJ, Hormozdiari F, Krumm N, Huddleston J, Coe BP, Baker C, Nordenfelt S, Bamshad M, Jorde LB, Posukh OL, Sahakyan H, Watkins WS, Yepiskoposyan L, ... ... Patterson N, et al. Global diversity, population stratification, and selection of human copy number variation. Science (New York, N.Y.). PMID 26249230 DOI: 10.1126/Science.Aab3761 |
0.661 |
|
| 2015 |
Skoglund P, Mallick S, Bortolini MC, Chennagiri N, Hünemeier T, Petzl-Erler ML, Salzano FM, Patterson N, Reich D. Genetic evidence for two founding populations of the Americas. Nature. 525: 104-8. PMID 26196601 DOI: 10.1038/Nature14895 |
0.641 |
|
| 2015 |
Tandon A, Chen CJ, Penman A, Hancock H, James M, Husain D, Andreoli C, Li X, Kuo JZ, Idowu O, Riche D, Papavasilieou E, Brauner S, Smith SO, Hoadley S, ... ... Patterson N, et al. African Ancestry Analysis and Admixture Genetic Mapping for Proliferative Diabetic Retinopathy in African Americans. Investigative Ophthalmology & Visual Science. 56: 3999-4005. PMID 26098467 DOI: 10.1167/Iovs.15-16674 |
0.519 |
|
| 2015 |
Fu Q, Hajdinjak M, Moldovan OT, Constantin S, Mallick S, Skoglund P, Patterson N, Rohland N, Lazaridis I, Nickel B, Viola B, Prüfer K, Meyer M, Kelso J, Reich D, et al. An early modern human from Romania with a recent Neanderthal ancestor. Nature. PMID 26098372 DOI: 10.1038/Nature14558 |
0.595 |
|
| 2015 |
Williams AL, Genovese G, Dyer T, Altemose N, Truax K, Jun G, Patterson N, Myers SR, Curran JE, Duggirala R, Blangero J, Reich D, Przeworski M. Non-crossover gene conversions show strong GC bias and unexpected clustering in humans. Elife. 4. PMID 25806687 DOI: 10.7554/Elife.04637 |
0.732 |
|
| 2015 |
Haak W, Lazaridis I, Patterson N, Rohland N, Mallick S, Llamas B, Brandt G, Nordenfelt S, Harney E, Stewardson K, Fu Q, Mittnik A, Bánffy E, Economou C, Francken M, et al. Massive migration from the steppe was a source for Indo-European languages in Europe. Nature. 522: 207-11. PMID 25731166 DOI: 10.1038/Nature14317 |
0.633 |
|
| 2015 |
Loh PR, Tucker G, Bulik-Sullivan BK, Vilhjálmsson BJ, Finucane HK, Salem RM, Chasman DI, Ridker PM, Neale BM, Berger B, Patterson N, Price AL. Efficient Bayesian mixed-model analysis increases association power in large cohorts. Nature Genetics. 47: 284-90. PMID 25642633 DOI: 10.1038/Ng.3190 |
0.34 |
|
| 2015 |
Bulik-Sullivan BK, Loh PR, Finucane HK, Ripke S, Yang J, Patterson N, Daly MJ, Price AL, Neale BM. LD Score regression distinguishes confounding from polygenicity in genome-wide association studies. Nature Genetics. 47: 291-5. PMID 25642630 DOI: 10.1038/Ng.3211 |
0.422 |
|
| 2015 |
Williams AL, Genovese G, Dyer T, Altemose N, Truax K, Jun G, Patterson N, Myers SR, Curran JE, Duggirala R, Blangero J, Reich D, Przeworski M. Author response: Non-crossover gene conversions show strong GC bias and unexpected clustering in humans Elife. DOI: 10.7554/Elife.04637.012 |
0.671 |
|
| 2014 |
Zaitlen N, Pasaniuc B, Sankararaman S, Bhatia G, Zhang J, Gusev A, Young T, Tandon A, Pollack S, Vilhjálmsson BJ, Assimes TL, Berndt SI, Blot WJ, Chanock S, Franceschini N, ... ... Patterson N, et al. Leveraging population admixture to characterize the heritability of complex traits. Nature Genetics. 46: 1356-62. PMID 25383972 DOI: 10.1038/Ng.3139 |
0.524 |
|
| 2014 |
Bhatia G, Tandon A, Patterson N, Aldrich MC, Ambrosone CB, Amos C, Bandera EV, Berndt SI, Bernstein L, Blot WJ, Bock CH, Caporaso N, Casey G, Deming SL, Diver WR, et al. Genome-wide scan of 29,141 African Americans finds no evidence of directional selection since admixture. American Journal of Human Genetics. 95: 437-44. PMID 25242497 DOI: 10.1016/J.Ajhg.2014.08.011 |
0.61 |
|
| 2014 |
Lazaridis I, Patterson N, Mittnik A, Renaud G, Mallick S, Kirsanow K, Sudmant PH, Schraiber JG, Castellano S, Lipson M, Berger B, Economou C, Bollongino R, Fu Q, Bos KI, et al. Ancient human genomes suggest three ancestral populations for present-day Europeans. Nature. 513: 409-13. PMID 25230663 DOI: 10.1038/Nature13673 |
0.666 |
|
| 2014 |
Lipson M, Loh PR, Patterson N, Moorjani P, Ko YC, Stoneking M, Berger B, Reich D. Reconstructing Austronesian population history in Island Southeast Asia. Nature Communications. 5: 4689. PMID 25137359 DOI: 10.1038/Ncomms5689 |
0.797 |
|
| 2014 |
Pickrell JK, Patterson N, Loh PR, Lipson M, Berger B, Stoneking M, Pakendorf B, Reich D. Ancient west Eurasian ancestry in southern and eastern Africa. Proceedings of the National Academy of Sciences of the United States of America. 111: 2632-7. PMID 24550290 DOI: 10.1073/Pnas.1313787111 |
0.641 |
|
| 2014 |
Sankararaman S, Mallick S, Dannemann M, Prüfer K, Kelso J, Pääbo S, Patterson N, Reich D. The genomic landscape of Neanderthal ancestry in present-day humans. Nature. 507: 354-7. PMID 24476815 DOI: 10.1038/Nature12961 |
0.635 |
|
| 2014 |
Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, Li H, Mallick S, Dannemann M, Fu Q, Kircher M, et al. The complete genome sequence of a Neanderthal from the Altai Mountains. Nature. 505: 43-9. PMID 24352235 DOI: 10.1038/Nature12886 |
0.783 |
|
| 2013 |
Bryc K, Patterson N, Reich D. A novel approach to estimating heterozygosity from low-coverage genome sequence. Genetics. 195: 553-61. PMID 23934885 DOI: 10.1534/Genetics.113.154500 |
0.539 |
|
| 2013 |
Moorjani P, Thangaraj K, Patterson N, Lipson M, Loh PR, Govindaraj P, Berger B, Reich D, Singh L. Genetic evidence for recent population mixture in India. American Journal of Human Genetics. 93: 422-38. PMID 23932107 DOI: 10.1016/J.Ajhg.2013.07.006 |
0.8 |
|
| 2013 |
Karlsson EK, Harris JB, Tabrizi S, Rahman A, Shlyakhter I, Patterson N, O'Dushlaine C, Schaffner SF, Gupta S, Chowdhury F, Sheikh A, Shin OS, Ellis C, Becker CE, Stuart LM, et al. Natural selection in a bangladeshi population from the cholera-endemic ganges river delta. Science Translational Medicine. 5: 192ra86. PMID 23825302 DOI: 10.1126/Scitranslmed.3006338 |
0.433 |
|
| 2013 |
Zaitlen N, Kraft P, Patterson N, Pasaniuc B, Bhatia G, Pollack S, Price AL. Using extended genealogy to estimate components of heritability for 23 quantitative and dichotomous traits. Plos Genetics. 9: e1003520. PMID 23737753 DOI: 10.1371/Journal.Pgen.1003520 |
0.417 |
|
| 2013 |
Lipson M, Loh PR, Levin A, Reich D, Patterson N, Berger B. Efficient moment-based inference of admixture parameters and sources of gene flow. Molecular Biology and Evolution. 30: 1788-802. PMID 23709261 DOI: 10.1093/Molbev/Mst099 |
0.65 |
|
| 2013 |
Moorjani P, Patterson N, Loh PR, Lipson M, Kisfali P, Melegh BI, Bonin M, Kádaši L, Rieß O, Berger B, Reich D, Melegh B. Reconstructing Roma history from genome-wide data. Plos One. 8: e58633. PMID 23516520 DOI: 10.1371/Journal.Pone.0058633 |
0.812 |
|
| 2013 |
Haber M, Gauguier D, Youhanna S, Patterson N, Moorjani P, Botigué LR, Platt DE, Matisoo-Smith E, Soria-Hernanz DF, Wells RS, Bertranpetit J, Tyler-Smith C, Comas D, Zalloua PA. Genome-wide diversity in the levant reveals recent structuring by culture. Plos Genetics. 9: e1003316. PMID 23468648 DOI: 10.1371/Journal.Pgen.1003316 |
0.78 |
|
| 2013 |
Price AL, Zaitlen NA, Reich D, Patterson N. Response to Sul and Eskin. Nature Reviews. Genetics. 14: 300. PMID 23438870 DOI: 10.1038/Nrg2813-C2 |
0.427 |
|
| 2013 |
Loh PR, Lipson M, Patterson N, Moorjani P, Pickrell JK, Reich D, Berger B. Inferring admixture histories of human populations using linkage disequilibrium. Genetics. 193: 1233-54. PMID 23410830 DOI: 10.1534/Genetics.112.147330 |
0.802 |
|
| 2013 |
d'Alpoim Guedes J, Bestor TC, Carrasco D, Flad R, Fosse E, Herzfeld M, Lamberg-Karlovsky CC, Lewis CM, Liebmann M, Meadow R, Patterson N, Price M, Reiches M, Richardson S, Shattuck-Heidorn H, et al. Is poverty in our genes?: A critique of Ashraf and Galor, "The 'out of Africa' hypothesis, human genetic diversity, and comparative economic development," American Economic Review (forthcoming) Current Anthropology. 54: 71-79. DOI: 10.1086/669034 |
0.428 |
|
| 2012 |
Wise LA, Ruiz-Narvaez EA, Palmer JR, Cozier YC, Tandon A, Patterson N, Radin RG, Rosenberg L, Reich D. African ancestry and genetic risk for uterine leiomyomata. American Journal of Epidemiology. 176: 1159-68. PMID 23161897 DOI: 10.1093/Aje/Kws276 |
0.604 |
|
| 2012 |
Zaitlen N, Lindström S, Pasaniuc B, Cornelis M, Genovese G, Pollack S, Barton A, Bickeböller H, Bowden DW, Eyre S, Freedman BI, Friedman DJ, Field JK, Groop L, Haugen A, ... ... Patterson N, et al. Informed conditioning on clinical covariates increases power in case-control association studies. Plos Genetics. 8: e1003032. PMID 23144628 DOI: 10.1371/Journal.Pgen.1003032 |
0.3 |
|
| 2012 |
Pickrell JK, Patterson N, Barbieri C, Berthold F, Gerlach L, Güldemann T, Kure B, Mpoloka SW, Nakagawa H, Naumann C, Lipson M, Loh PR, Lachance J, Mountain J, Bustamante CD, et al. The genetic prehistory of southern Africa. Nature Communications. 3: 1143. PMID 23072811 DOI: 10.1038/Ncomms2140 |
0.694 |
|
| 2012 |
Sankararaman S, Patterson N, Li H, Pääbo S, Reich D. The date of interbreeding between Neandertals and modern humans. Plos Genetics. 8: e1002947. PMID 23055938 DOI: 10.1371/Journal.Pgen.1002947 |
0.637 |
|
| 2012 |
Patterson N, Moorjani P, Luo Y, Mallick S, Rohland N, Zhan Y, Genschoreck T, Webster T, Reich D. Ancient admixture in human history. Genetics. 192: 1065-93. PMID 22960212 DOI: 10.1534/Genetics.112.145037 |
0.796 |
|
| 2012 |
Meyer M, Kircher M, Gansauge MT, Li H, Racimo F, Mallick S, Schraiber JG, Jay F, Prüfer K, de Filippo C, Sudmant PH, Alkan C, Fu Q, Do R, Rohland N, ... ... Patterson N, et al. A high-coverage genome sequence from an archaic Denisovan individual. Science (New York, N.Y.). 338: 222-6. PMID 22936568 DOI: 10.1126/Science.1224344 |
0.637 |
|
| 2012 |
Sun JX, Helgason A, Masson G, Ebenesersdóttir SS, Li H, Mallick S, Gnerre S, Patterson N, Kong A, Reich D, Stefansson K. A direct characterization of human mutation based on microsatellites. Nature Genetics. 44: 1161-5. PMID 22922873 DOI: 10.1038/Ng.2398 |
0.526 |
|
| 2012 |
Williams AL, Patterson N, Glessner J, Hakonarson H, Reich D. Phasing of many thousands of genotyped samples. American Journal of Human Genetics. 91: 238-51. PMID 22883141 DOI: 10.1016/J.Ajhg.2012.06.013 |
0.507 |
|
| 2012 |
Reich D, Patterson N, Campbell D, Tandon A, Mazieres S, Ray N, Parra MV, Rojas W, Duque C, Mesa N, GarcÃa LF, Triana O, Blair S, Maestre A, Dib JC, et al. Reconstructing Native American population history. Nature. 488: 370-4. PMID 22801491 DOI: 10.1038/Nature11258 |
0.623 |
|
| 2012 |
Prüfer K, Munch K, Hellmann I, Akagi K, Miller JR, Walenz B, Koren S, Sutton G, Kodira C, Winer R, Knight JR, Mullikin JC, Meader SJ, Ponting CP, Lunter G, ... ... Patterson N, et al. The bonobo genome compared with the chimpanzee and human genomes. Nature. 486: 527-31. PMID 22722832 DOI: 10.1038/Nature11128 |
0.425 |
|
| 2012 |
Pasaniuc B, Rohland N, McLaren PJ, Garimella K, Zaitlen N, Li H, Gupta N, Neale BM, Daly MJ, Sklar P, Sullivan PF, Bergen S, Moran JL, Hultman CM, Lichtenstein P, ... ... Patterson N, et al. Extremely low-coverage sequencing and imputation increases power for genome-wide association studies. Nature Genetics. 44: 631-5. PMID 22610117 DOI: 10.1038/Ng.2283 |
0.589 |
|
| 2012 |
Zaitlen N, Pasaniuc B, Patterson N, Pollack S, Voight B, Groop L, Altshuler D, Henderson BE, Kolonel LN, Le Marchand L, Waters K, Haiman CA, Stranger BE, Dermitzakis ET, Kraft P, et al. Analysis of case-control association studies with known risk variants. Bioinformatics (Oxford, England). 28: 1729-37. PMID 22556366 DOI: 10.1093/Bioinformatics/Bts259 |
0.352 |
|
| 2012 |
Cheng CY, Reich D, Haiman CA, Tandon A, Patterson N, Selvin E, Elizabeth S, Akylbekova EL, Brancati FL, Coresh J, Boerwinkle E, Altshuler D, Taylor HA, Henderson BE, Wilson JG, et al. African ancestry and its correlation to type 2 diabetes in African Americans: a genetic admixture analysis in three U.S. population cohorts. Plos One. 7: e32840. PMID 22438884 DOI: 10.1371/Journal.Pone.0032840 |
0.544 |
|
| 2012 |
Miller W, Hayes VM, Ratan A, Petersen DC, Wittekindt NE, Miller J, Walenz B, Knight J, Qi J, Zhao F, Wang Q, Bedoya-Reina OC, Katiyar N, Tomsho LP, Kasson LM, ... ... Patterson N, et al. Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil) (Proceedings of the National Academy of Sciences of the United States of America (2011) 108, 30 (12348-12353) DOI: 10.1073/pnas.1102838108) Proceedings of the National Academy of Sciences of the United States of America. 109: 18625. DOI: 10.1073/Pnas.1217345109 |
0.388 |
|
| 2012 |
Reich D, Patterson N, Campbell D, Tandon A, Mazieres S, Ray N, Parra MV, Rojas W, Duque C, Mesa N, García LF, Triana O, Blair S, Maestre A, Dib JC, et al. Erratum: Corrigendum: Reconstructing Native American population history Nature. 491: 288-288. DOI: 10.1038/Nature11667 |
0.567 |
|
| 2011 |
Reich D, Patterson N, Kircher M, Delfin F, Nandineni MR, Pugach I, Ko AM, Ko YC, Jinam TA, Phipps ME, Saitou N, Wollstein A, Kayser M, Pääbo S, Stoneking M. Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania. American Journal of Human Genetics. 89: 516-28. PMID 21944045 DOI: 10.1016/J.Ajhg.2011.09.005 |
0.617 |
|
| 2011 |
Bhatia G, Patterson N, Pasaniuc B, Zaitlen N, Genovese G, Pollack S, Mallick S, Myers S, Tandon A, Spencer C, Palmer CD, Adeyemo AA, Akylbekova EL, Cupples LA, Divers J, et al. Genome-wide comparison of African-ancestry populations from CARe and other cohorts reveals signals of natural selection. American Journal of Human Genetics. 89: 368-81. PMID 21907010 DOI: 10.1016/J.Ajhg.2011.07.025 |
0.651 |
|
| 2011 |
Hinch AG, Tandon A, Patterson N, Song Y, Rohland N, Palmer CD, Chen GK, Wang K, Buxbaum SG, Akylbekova EL, Aldrich MC, Ambrosone CB, Amos C, Bandera EV, Berndt SI, et al. The landscape of recombination in African Americans. Nature. 476: 170-5. PMID 21775986 DOI: 10.1038/Nature10336 |
0.641 |
|
| 2011 |
Shah AM, Tamang R, Moorjani P, Rani DS, Govindaraj P, Kulkarni G, Bhattacharya T, Mustak MS, Bhaskar LV, Reddy AG, Gadhvi D, Gai PB, Chaubey G, Patterson N, Reich D, et al. Indian Siddis: African descendants with Indian admixture. American Journal of Human Genetics. 89: 154-61. PMID 21741027 DOI: 10.1016/J.Ajhg.2011.05.030 |
0.806 |
|
| 2011 |
Miller W, Hayes VM, Ratan A, Petersen DC, Wittekindt NE, Miller J, Walenz B, Knight J, Qi J, Zhao F, Wang Q, Bedoya-Reina OC, Katiyar N, Tomsho LP, Kasson LM, ... ... Patterson N, et al. Genetic diversity and population structure of the endangered marsupial Sarcophilus harrisii (Tasmanian devil). Proceedings of the National Academy of Sciences of the United States of America. 108: 12348-53. PMID 21709235 DOI: 10.1073/Pnas.1102838108 |
0.5 |
|
| 2011 |
Pasaniuc B, Zaitlen N, Lettre G, Chen GK, Tandon A, Kao WH, Ruczinski I, Fornage M, Siscovick DS, Zhu X, Larkin E, Lange LA, Cupples LA, Yang Q, Akylbekova EL, ... ... Patterson N, et al. Enhanced statistical tests for GWAS in admixed populations: assessment using African Americans from CARe and a Breast Cancer Consortium. Plos Genetics. 7: e1001371. PMID 21541012 DOI: 10.1371/Journal.Pgen.1001371 |
0.616 |
|
| 2011 |
Moorjani P, Patterson N, Hirschhorn JN, Keinan A, Hao L, Atzmon G, Burns E, Ostrer H, Price AL, Reich D. The history of African gene flow into Southern Europeans, Levantines, and Jews. Plos Genetics. 7: e1001373. PMID 21533020 DOI: 10.1371/Journal.Pgen.1001373 |
0.808 |
|
| 2011 |
Lettre G, Palmer CD, Young T, Ejebe KG, Allayee H, Benjamin EJ, Bennett F, Bowden DW, Chakravarti A, Dreisbach A, Farlow DN, Folsom AR, Fornage M, Forrester T, Fox E, ... ... Patterson N, et al. Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project. Plos Genetics. 7: e1001300. PMID 21347282 DOI: 10.1371/Journal.Pgen.1001300 |
0.447 |
|
| 2011 |
Durand EY, Patterson N, Reich D, Slatkin M. Testing for ancient admixture between closely related populations. Molecular Biology and Evolution. 28: 2239-52. PMID 21325092 DOI: 10.1093/Molbev/Msr048 |
0.609 |
|
| 2011 |
Deo RC, Wilson JG, Xing C, Lawson K, Kao WH, Reich D, Tandon A, Akylbekova E, Patterson N, Mosley TH, Boerwinkle E, Taylor HA. Single-nucleotide polymorphisms in LPA explain most of the ancestry-specific variation in Lp(a) levels in African Americans. Plos One. 6: e14581. PMID 21283670 DOI: 10.1371/Journal.Pone.0014581 |
0.557 |
|
| 2011 |
Tandon A, Patterson N, Reich D. Ancestry informative marker panels for African Americans based on subsets of commercially available SNP arrays. Genetic Epidemiology. 35: 80-3. PMID 21181899 DOI: 10.1002/Gepi.20550 |
0.579 |
|
| 2010 |
Reich D, Green RE, Kircher M, Krause J, Patterson N, Durand EY, Viola B, Briggs AW, Stenzel U, Johnson PL, Maricic T, Good JM, Marques-Bonet T, Alkan C, Fu Q, et al. Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature. 468: 1053-60. PMID 21179161 DOI: 10.1038/Nature09710 |
0.65 |
|
| 2010 |
Price AL, Zaitlen NA, Reich D, Patterson N. New approaches to population stratification in genome-wide association studies. Nature Reviews. Genetics. 11: 459-63. PMID 20548291 DOI: 10.1038/Nrg2813 |
0.638 |
|
| 2010 |
Green RE, Krause J, Briggs AW, Maricic T, Stenzel U, Kircher M, Patterson N, Li H, Zhai W, Fritz MH, Hansen NF, Durand EY, Malaspinas AS, Jensen JD, Marques-Bonet T, et al. A draft sequence of the Neandertal genome. Science (New York, N.Y.). 328: 710-22. PMID 20448178 DOI: 10.1126/Science.1188021 |
0.614 |
|
| 2010 |
Cheng CY, Reich D, Wong TY, Klein R, Klein BE, Patterson N, Tandon A, Li M, Boerwinkle E, Sharrett AR, Kao WH. Admixture mapping scans identify a locus affecting retinal vascular caliber in hypertensive African Americans: the Atherosclerosis Risk in Communities (ARIC) study. Plos Genetics. 6: e1000908. PMID 20419148 DOI: 10.1371/Journal.Pgen.1000908 |
0.571 |
|
| 2010 |
Schuster SC, Miller W, Ratan A, Tomsho LP, Giardine B, Kasson LR, Harris RS, Petersen DC, Zhao F, Qi J, Alkan C, Kidd JM, Sun Y, Drautz DI, Bouffard P, ... ... Patterson N, et al. Complete Khoisan and Bantu genomes from southern Africa. Nature. 463: 943-7. PMID 20164927 DOI: 10.1038/Nature08795 |
0.773 |
|
| 2010 |
Chen H, Patterson N, Reich D. Population differentiation as a test for selective sweeps. Genome Research. 20: 393-402. PMID 20086244 DOI: 10.1101/Gr.100545.109 |
0.59 |
|
| 2010 |
Patterson N, Petersen DC, van der Ross RE, Sudoyo H, Glashoff RH, Marzuki S, Reich D, Hayes VM. Genetic structure of a unique admixed population: implications for medical research. Human Molecular Genetics. 19: 411-9. PMID 19892779 DOI: 10.1093/Hmg/Ddp505 |
0.666 |
|
| 2010 |
Cheng CY, Reich D, Coresh J, Boerwinkle E, Patterson N, Li M, North KE, Tandon A, Bailey-Wilson JE, Wilson JG, Kao WH. Admixture mapping of obesity-related traits in African Americans: the Atherosclerosis Risk in Communities (ARIC) Study. Obesity (Silver Spring, Md.). 18: 563-72. PMID 19696751 DOI: 10.1038/Oby.2009.282 |
0.533 |
|
| 2010 |
Moorjani P, Patterson N, Hirschhorn JN, Price A, Reich D. African gene flow into West Eurasia in the last 3,000 years F1000research. 1. DOI: 10.7490/F1000Research.228.1 |
0.732 |
|
| 2009 |
Reich D, Thangaraj K, Patterson N, Price AL, Singh L. Reconstructing Indian population history. Nature. 461: 489-94. PMID 19779445 DOI: 10.1038/Nature08365 |
0.664 |
|
| 2009 |
Price AL, Tandon A, Patterson N, Barnes KC, Rafaels N, Ruczinski I, Beaty TH, Mathias R, Reich D, Myers S. Sensitive detection of chromosomal segments of distinct ancestry in admixed populations. Plos Genetics. 5: e1000519. PMID 19543370 DOI: 10.1371/Journal.Pgen.1000519 |
0.628 |
|
| 2009 |
Cheng CY, Kao WH, Patterson N, Tandon A, Haiman CA, Harris TB, Xing C, John EM, Ambrosone CB, Brancati FL, Coresh J, Press MF, Parekh RS, Klag MJ, Meoni LA, et al. Admixture mapping of 15,280 African Americans identifies obesity susceptibility loci on chromosomes 5 and X. Plos Genetics. 5: e1000490. PMID 19461885 DOI: 10.1371/Journal.Pgen.1000490 |
0.582 |
|
| 2009 |
De Jager PL, Baecher-Allan C, Maier LM, Arthur AT, Ottoboni L, Barcellos L, McCauley JL, Sawcer S, Goris A, Saarela J, Yelensky R, Price A, Leppa V, Patterson N, de Bakker PI, et al. The role of the CD58 locus in multiple sclerosis. Proceedings of the National Academy of Sciences of the United States of America. 106: 5264-9. PMID 19237575 DOI: 10.1073/Pnas.0813310106 |
0.469 |
|
| 2009 |
Sun JX, Mullikin JC, Patterson N, Reich DE. Microsatellites are molecular clocks that support accurate inferences about history. Molecular Biology and Evolution. 26: 1017-27. PMID 19221007 DOI: 10.1093/Molbev/Msp025 |
0.625 |
|
| 2009 |
Reich D, Nalls MA, Kao WH, Akylbekova EL, Tandon A, Patterson N, Mullikin J, Hsueh WC, Cheng CY, Coresh J, Boerwinkle E, Li M, Waliszewska A, Neubauer J, Li R, et al. Reduced neutrophil count in people of African descent is due to a regulatory variant in the Duffy antigen receptor for chemokines gene. Plos Genetics. 5: e1000360. PMID 19180233 DOI: 10.1371/Journal.Pgen.1000360 |
0.586 |
|
| 2009 |
Dhandapany PS, Sadayappan S, Xue Y, Powell GT, Rani DS, Nallari P, Rai TS, Khullar M, Soares P, Bahl A, Tharkan JM, Vaideeswar P, Rathinavel A, Narasimhan C, Ayapati DR, ... ... Patterson N, et al. A common MYBPC3 (cardiac myosin binding protein C) variant associated with cardiomyopathies in South Asia. Nature Genetics. 41: 187-91. PMID 19151713 DOI: 10.1038/Ng.309 |
0.528 |
|
| 2009 |
Deo RC, Reich D, Tandon A, Akylbekova E, Patterson N, Waliszewska A, Kathiresan S, Sarpong D, Taylor HA, Wilson JG. Genetic differences between the determinants of lipid profile phenotypes in African and European Americans: the Jackson Heart Study. Plos Genetics. 5: e1000342. PMID 19148283 DOI: 10.1371/Journal.Pgen.1000342 |
0.623 |
|
| 2009 |
Keinan A, Mullikin JC, Patterson N, Reich D. Accelerated genetic drift on chromosome X during the human dispersal out of Africa. Nature Genetics. 41: 66-70. PMID 19098910 DOI: 10.1038/Ng.303 |
0.594 |
|
| 2008 |
Price AL, Patterson N, Hancks DC, Myers S, Reich D, Cheung VG, Spielman RS. Effects of cis and trans genetic ancestry on gene expression in African Americans. Plos Genetics. 4: e1000294. PMID 19057673 DOI: 10.1371/Journal.Pgen.1000294 |
0.621 |
|
| 2008 |
Miller W, Drautz DI, Ratan A, Pusey B, Qi J, Lesk AM, Tomsho LP, Packard MD, Zhao F, Sher A, Tikhonov A, Raney B, Patterson N, Lindblad-Toh K, Lander ES, et al. Sequencing the nuclear genome of the extinct woolly mammoth. Nature. 456: 387-90. PMID 19020620 DOI: 10.1038/Nature07446 |
0.429 |
|
| 2008 |
Keating BJ, Tischfield S, Murray SS, Bhangale T, Price TS, Glessner JT, Galver L, Barrett JC, Grant SF, Farlow DN, Chandrupatla HR, Hansen M, Ajmal S, Papanicolaou GJ, Guo Y, ... ... Patterson N, et al. Concept, design and implementation of a cardiovascular gene-centric 50 k SNP array for large-scale genomic association studies. Plos One. 3: e3583. PMID 18974833 DOI: 10.1371/Journal.Pone.0003583 |
0.638 |
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| 2008 |
Kao WH, Klag MJ, Meoni LA, Reich D, Berthier-Schaad Y, Li M, Coresh J, Patterson N, Tandon A, Powe NR, Fink NE, Sadler JH, Weir MR, Abboud HE, Adler SG, et al. MYH9 is associated with nondiabetic end-stage renal disease in African Americans. Nature Genetics. 40: 1185-92. PMID 18794854 DOI: 10.1038/Ng.232 |
0.561 |
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| 2008 |
Price AL, Weale ME, Patterson N, Myers SR, Need AC, Shianna KV, Ge D, Rotter JI, Torres E, Taylor KD, Goldstein DB, Reich D. Long-range LD can confound genome scans in admixed populations. American Journal of Human Genetics. 83: 132-5; author reply . PMID 18606306 DOI: 10.1016/J.Ajhg.2008.06.005 |
0.484 |
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| 2008 |
Reich D, Price AL, Patterson N. Principal component analysis of genetic data. Nature Genetics. 40: 491-2. PMID 18443580 DOI: 10.1038/Ng0508-491 |
0.565 |
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| 2008 |
Myers S, Fefferman C, Patterson N. Can one learn history from the allelic spectrum? Theoretical Population Biology. 73: 342-8. PMID 18321552 DOI: 10.1016/J.Tpb.2008.01.001 |
0.369 |
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| 2008 |
Hughes LB, Morrison D, Kelley JM, Padilla MA, Vaughan LK, Westfall AO, Dwivedi H, Mikuls TR, Holers VM, Parrish LA, Alarcón GS, Conn DL, Jonas BL, Callahan LF, Smith EA, ... ... Patterson N, et al. The HLA-DRB1 shared epitope is associated with susceptibility to rheumatoid arthritis in African Americans through European genetic admixture. Arthritis and Rheumatism. 58: 349-58. PMID 18240241 DOI: 10.1002/Art.23166 |
0.58 |
|
| 2008 |
Price AL, Butler J, Patterson N, Capelli C, Pascali VL, Scarnicci F, Ruiz-Linares A, Groop L, Saetta AA, Korkolopoulou P, Seligsohn U, Waliszewska A, Schirmer C, Ardlie K, Ramos A, et al. Discerning the ancestry of European Americans in genetic association studies. Plos Genetics. 4: e236. PMID 18208327 DOI: 10.1371/Journal.Pgen.0030236 |
0.655 |
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| 2008 |
Nalls MA, Wilson JG, Patterson NJ, Tandon A, Zmuda JM, Huntsman S, Garcia M, Hu D, Li R, Beamer BA, Patel KV, Akylbekova EL, Files JC, Hardy CL, Buxbaum SG, et al. Admixture mapping of white cell count: genetic locus responsible for lower white blood cell count in the Health ABC and Jackson Heart studies. American Journal of Human Genetics. 82: 81-7. PMID 18179887 DOI: 10.1016/J.Ajhg.2007.09.003 |
0.568 |
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| 2008 |
Patterson N, Richter DJ, Gnerre S, Lander ES, Reich D. Patterson et al. reply Nature. 452: E4. DOI: 10.1038/Nature06806 |
0.532 |
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| 2008 |
Nalls MA, Wilson JG, Patterson NJ, Tandon A, Zmuda JM, Huntsman S, Garcia M, Hu D, Li R, Beamer BA, Patel KV, Akylbekova EL, Files JC, Hardy CL, Buxbaum SG, et al. Admixture Mapping of White Cell Count: Genetic Locus Responsible for Lower White Blood Cell Count in the Health ABC and Jackson Heart Studies (DOI:10.1016/j.ajhg.2007.09.003) American Journal of Human Genetics. 82: 532. DOI: 10.1016/J.Ajhg.2008.01.002 |
0.431 |
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| 2007 |
Deo RC, Patterson N, Tandon A, McDonald GJ, Haiman CA, Ardlie K, Henderson BE, Henderson SO, Reich D. A high-density admixture scan in 1,670 African Americans with hypertension. Plos Genetics. 3: e196. PMID 18020707 DOI: 10.1371/Journal.Pgen.0030196 |
0.6 |
|
| 2007 |
Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, Cotsapas C, Xie X, Byrne EH, McCarroll SA, Gaudet R, Schaffner SF, Lander ES, Frazer KA, Ballinger DG, ... ... Patterson N, et al. Genome-wide detection and characterization of positive selection in human populations. Nature. 449: 913-8. PMID 17943131 DOI: 10.1038/Nature06250 |
0.483 |
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| 2007 |
Frazer KA, Ballinger DG, Cox DR, Hinds DA, Stuve LL, Gibbs RA, Belmont JW, Boudreau A, Hardenbol P, Leal SM, Pasternak S, Wheeler DA, Willis TD, Yu F, ... ... Patterson N, et al. A second generation human haplotype map of over 3.1 million SNPs. Nature. 449: 851-61. PMID 17943122 DOI: 10.1038/Nature06258 |
0.492 |
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| 2007 |
Karlsson EK, Baranowska I, Wade CM, Salmon Hillbertz NH, Zody MC, Anderson N, Biagi TM, Patterson N, Pielberg GR, Kulbokas EJ, Comstock KE, Keller ET, Mesirov JP, von Euler H, Kämpe O, et al. Efficient mapping of mendelian traits in dogs through genome-wide association. Nature Genetics. 39: 1321-8. PMID 17906626 DOI: 10.1038/Ng.2007.10 |
0.379 |
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| 2007 |
Keinan A, Mullikin JC, Patterson N, Reich D. Measurement of the human allele frequency spectrum demonstrates greater genetic drift in East Asians than in Europeans. Nature Genetics. 39: 1251-5. PMID 17828266 DOI: 10.1038/Ng2116 |
0.627 |
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| 2007 |
Ayodo G, Price AL, Keinan A, Ajwang A, Otieno MF, Orago AS, Patterson N, Reich D. Combining evidence of natural selection with association analysis increases power to detect malaria-resistance variants. American Journal of Human Genetics. 81: 234-42. PMID 17668374 DOI: 10.1086/519221 |
0.495 |
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| 2007 |
Price AL, Patterson N, Yu F, Cox DR, Waliszewska A, McDonald GJ, Tandon A, Schirmer C, Neubauer J, Bedoya G, Duque C, Villegas A, Bortolini MC, Salzano FM, Gallo C, et al. A genomewide admixture map for Latino populations. American Journal of Human Genetics. 80: 1024-36. PMID 17503322 DOI: 10.1086/518313 |
0.583 |
|
| 2007 |
Becquet C, Patterson N, Stone AC, Przeworski M, Reich D. Genetic structure of chimpanzee populations. Plos Genetics. 3: e66. PMID 17447846 DOI: 10.1371/Journal.Pgen.0030066 |
0.761 |
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| 2007 |
Haiman CA, Patterson N, Freedman ML, Myers SR, Pike MC, Waliszewska A, Neubauer J, Tandon A, Schirmer C, McDonald GJ, Greenway SC, Stram DO, Le Marchand L, Kolonel LN, Frasco M, et al. Multiple regions within 8q24 independently affect risk for prostate cancer. Nature Genetics. 39: 638-44. PMID 17401364 DOI: 10.1038/Ng2015 |
0.511 |
|
| 2007 |
Reich D, Patterson N, Ramesh V, De Jager PL, McDonald GJ, Tandon A, Choy E, Hu D, Tamraz B, Pawlikowska L, Wassel-Fyr C, Huntsman S, Waliszewska A, Rossin E, Li R, et al. Admixture mapping of an allele affecting interleukin 6 soluble receptor and interleukin 6 levels. American Journal of Human Genetics. 80: 716-26. PMID 17357077 DOI: 10.1086/513206 |
0.515 |
|
| 2007 |
Shaffer JR, Kammerer CM, Reich D, McDonald G, Patterson N, Goodpaster B, Bauer DC, Li J, Newman AB, Cauley JA, Harris TB, Tylavsky F, Ferrell RE, Zmuda JM. Genetic markers for ancestry are correlated with body composition traits in older African Americans. Osteoporosis International : a Journal Established as Result of Cooperation Between the European Foundation For Osteoporosis and the National Osteoporosis Foundation of the Usa. 18: 733-41. PMID 17235662 DOI: 10.1007/S00198-006-0316-6 |
0.58 |
|
| 2006 |
Patterson N, Price AL, Reich D. Population structure and eigenanalysis. Plos Genetics. 2: e190. PMID 17194218 DOI: 10.1371/Journal.Pgen.0020190 |
0.6 |
|
| 2006 |
Freedman ML, Haiman CA, Patterson N, McDonald GJ, Tandon A, Waliszewska A, Penney K, Steen RG, Ardlie K, John EM, Oakley-Girvan I, Whittemore AS, Cooney KA, Ingles SA, Altshuler D, et al. Admixture mapping identifies 8q24 as a prostate cancer risk locus in African-American men. Proceedings of the National Academy of Sciences of the United States of America. 103: 14068-73. PMID 16945910 DOI: 10.1073/Pnas.0605832103 |
0.507 |
|
| 2006 |
Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D. Principal components analysis corrects for stratification in genome-wide association studies. Nature Genetics. 38: 904-9. PMID 16862161 DOI: 10.1038/Ng1847 |
0.566 |
|
| 2006 |
Patterson N, Richter DJ, Gnerre S, Lander ES, Reich D. Genetic evidence for complex speciation of humans and chimpanzees. Nature. 441: 1103-8. PMID 16710306 DOI: 10.1038/Nature04789 |
0.625 |
|
| 2006 |
Marchini J, Cutler D, Patterson N, Stephens M, Eskin E, Halperin E, Lin S, Qin ZS, Munro HM, Abecasis GR, Donnelly P. A comparison of phasing algorithms for trios and unrelated individuals. American Journal of Human Genetics. 78: 437-50. PMID 16465620 DOI: 10.1086/500808 |
0.338 |
|
| 2006 |
Jager PD, Patterson N, McDonald G, Waliszewska A, Cree B, Wolfish C, Hauser S, Oksenberg J, Reich D, Hafler D. OR.22. Dissection of the Admixture Multiple Sclerosis Susceptibility Locus On Chromosome 1 in An African-American Population Clinical Immunology. 119. DOI: 10.1016/J.Clim.2006.04.024 |
0.572 |
|
| 2005 |
Sabeti PC, Walsh E, Schaffner SF, Varilly P, Fry B, Hutcheson HB, Cullen M, Mikkelsen TS, Roy J, Patterson N, Cooper R, Reich D, Altshuler D, O'Brien S, Lander ES. The case for selection at CCR5-Delta32. Plos Biology. 3: e378. PMID 16248677 DOI: 10.1371/Journal.Pbio.0030378 |
0.587 |
|
| 2005 |
Reich D, Patterson N, De Jager PL, McDonald GJ, Waliszewska A, Tandon A, Lincoln RR, DeLoa C, Fruhan SA, Cabre P, Bera O, Semana G, Kelly MA, Francis DA, Ardlie K, et al. A whole-genome admixture scan finds a candidate locus for multiple sclerosis susceptibility. Nature Genetics. 37: 1113-8. PMID 16186815 DOI: 10.1038/Ng1646 |
0.546 |
|
| 2005 |
Reich D, Patterson N. Will admixture mapping work to find disease genes? Philosophical Transactions of the Royal Society B: Biological Sciences. 360: 1605-1607. PMID 16096110 DOI: 10.1098/Rstb.2005.1691 |
0.523 |
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| 2005 |
Patterson NJ. How old is the most recent ancestor of two copies of an allele? Genetics. 169: 1093-104. PMID 15520271 DOI: 10.1534/genetics.103.015768 |
0.338 |
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| 2004 |
Cree BA, Khan O, Bourdette D, Goodin DS, Cohen JA, Marrie RA, Glidden D, Weinstock-Guttman B, Reich D, Patterson N, Haines JL, Pericak-Vance M, DeLoa C, Oksenberg JR, Hauser SL. Clinical characteristics of African Americans vs Caucasian Americans with multiple sclerosis. Neurology. 63: 2039-45. PMID 15596747 DOI: 10.1212/01.Wnl.0000145762.60562.5D |
0.424 |
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| 2004 |
Abecasis G, Cox N, Daly MJ, Kruglyak L, Laird N, Markianos K, Patterson N. No bias in linkage analysis. American Journal of Human Genetics. 75: 722-3; author reply . PMID 15338460 DOI: 10.1086/424757 |
0.331 |
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| 2004 |
Kellis M, Patterson N, Birren B, Berger B, Lander ES. Methods in comparative genomics: genome correspondence, gene identification and regulatory motif discovery. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 11: 319-55. PMID 15285895 DOI: 10.1089/1066527041410319 |
0.388 |
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| 2004 |
Sebat J, Lakshmi B, Troge J, Alexander J, Young J, Lundin P, Månér S, Massa H, Walker M, Chi M, Navin N, Lucito R, Healy J, Hicks J, Ye K, ... ... Patterson N, et al. Large-scale copy number polymorphism in the human genome. Science (New York, N.Y.). 305: 525-8. PMID 15273396 DOI: 10.1126/Science.1098918 |
0.426 |
|
| 2004 |
Bersaglieri T, Sabeti PC, Patterson N, Vanderploeg T, Schaffner SF, Drake JA, Rhodes M, Reich DE, Hirschhorn JN. Genetic signatures of strong recent positive selection at the lactase gene. American Journal of Human Genetics. 74: 1111-20. PMID 15114531 DOI: 10.1086/421051 |
0.608 |
|
| 2004 |
Smith MW, Patterson N, Lautenberger JA, Truelove AL, McDonald GJ, Waliszewska A, Kessing BD, Malasky MJ, Scafe C, Le E, De Jager PL, Mignault AA, Yi Z, De The G, Essex M, et al. A high-density admixture map for disease gene discovery in african americans. American Journal of Human Genetics. 74: 1001-13. PMID 15088270 DOI: 10.1086/420856 |
0.561 |
|
| 2004 |
Patterson N, Hattangadi N, Lane B, Lohmueller KE, Hafler DA, Oksenberg JR, Hauser SL, Smith MW, O'Brien SJ, Altshuler D, Daly MJ, Reich D. Methods for high-density admixture mapping of disease genes. American Journal of Human Genetics. 74: 979-1000. PMID 15088269 DOI: 10.1086/420871 |
0.626 |
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| 2004 |
Freedman ML, Reich D, Penney KL, McDonald GJ, Mignault AA, Patterson N, Gabriel SB, Topol EJ, Smoller JW, Pato CN, Pato MT, Petryshen TL, Kolonel LN, Lander ES, Sklar P, et al. Assessing the impact of population stratification on genetic association studies. Nature Genetics. 36: 388-93. PMID 15052270 DOI: 10.1038/Ng1333 |
0.582 |
|
| 2003 |
Walsh EC, Mather KA, Schaffner SF, Farwell L, Daly MJ, Patterson N, Cullen M, Carrington M, Bugawan TL, Erlich H, Campbell J, Barrett J, Miller K, Thomson G, Lander ES, et al. An integrated haplotype map of the human major histocompatibility complex. American Journal of Human Genetics. 73: 580-90. PMID 12920676 DOI: 10.1086/378101 |
0.417 |
|
| 2003 |
Mootha VK, Lindgren CM, Eriksson KF, Subramanian A, Sihag S, Lehar J, Puigserver P, Carlsson E, Ridderstråle M, Laurila E, Houstis N, Daly MJ, Patterson N, Mesirov JP, Golub TR, et al. PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nature Genetics. 34: 267-73. PMID 12808457 DOI: 10.1038/Ng1180 |
0.309 |
|
| 2003 |
Kellis M, Patterson N, Endrizzi M, Birren B, Lander ES. Sequencing and comparison of yeast species to identify genes and regulatory elements. Nature. 423: 241-54. PMID 12748633 DOI: 10.1038/Nature01644 |
0.386 |
|
| 2002 |
Sabeti PC, Reich DE, Higgins JM, Levine HZ, Richter DJ, Schaffner SF, Gabriel SB, Platko JV, Patterson NJ, McDonald GJ, Ackerman HC, Campbell SJ, Altshuler D, Cooper R, Kwiatkowski D, et al. Detecting recent positive selection in the human genome from haplotype structure. Nature. 419: 832-7. PMID 12397357 DOI: 10.1038/Nature01140 |
0.577 |
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