Terry Oakes - Publications

1995 University of Wisconsin, Madison, Madison, WI 

61/125 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Shackman AJ, Fox AS, Oler JA, Shelton SE, Oakes TR, Davidson RJ, Kalin NH. Heightened extended amygdala metabolism following threat characterizes the early phenotypic risk to develop anxiety-related psychopathology. Molecular Psychiatry. PMID 27573879 DOI: 10.1038/Mp.2016.132  0.4
2016 Koay CG, Yeh PH, Ollinger JM, İrfanoğlu MO, Pierpaoli C, Basser PJ, Oakes TR, Riedy G. Tract Orientation and Angular Dispersion Deviation Indicator (TOADDI): A framework for single-subject analysis in diffusion tensor imaging. Neuroimage. 126: 151-63. PMID 26638985 DOI: 10.1016/J.Neuroimage.2015.11.046  0.64
2015 Riedy G, Senseney JS, Liu W, Ollinger J, Sham E, Krapiva P, Patel JB, Smith A, Yeh PH, Graner J, Nathan D, Caban J, French LM, Harper J, Eskay V, ... ... Oakes TR, et al. Findings from Structural MR Imaging in Military Traumatic Brain Injury. Radiology. 150438. PMID 26669604 DOI: 10.1148/Radiol.2015150438  0.64
2015 Liu W, Soderlund K, Senseney JS, Joy D, Yeh PH, Ollinger J, Sham EB, Liu T, Wang Y, Oakes TR, Riedy G. Imaging Cerebral Microhemorrhages in Military Service Members with Chronic Traumatic Brain Injury. Radiology. 150160. PMID 26371749 DOI: 10.1148/radiol.2015150160  0.64
2015 Nathan DE, Oakes TR, Yeh PH, French LM, Harper JF, Liu W, Wolfowitz RD, Wang BQ, Graner JL, Riedy G. Exploring variations in functional connectivity of the resting state default mode network in mild traumatic brain injury. Brain Connectivity. 5: 102-14. PMID 25222050 DOI: 10.1089/Brain.2014.0273  0.64
2014 Byrnes KR, Wilson CM, Brabazon F, von Leden R, Jurgens JS, Oakes TR, Selwyn RG. FDG-PET imaging in mild traumatic brain injury: a critical review. Frontiers in Neuroenergetics. 5: 13. PMID 24409143 DOI: 10.3389/Fnene.2013.00013  0.64
2014 Yeh PH, Wang B, Oakes TR, French LM, Pan H, Graner J, Liu W, Riedy G. Postconcussional disorder and PTSD symptoms of military-related traumatic brain injury associated with compromised neurocircuitry. Human Brain Mapping. 35: 2652-73. PMID 24038816 DOI: 10.1002/hbm.22358  0.64
2013 Graner J, Oakes TR, French LM, Riedy G. Functional MRI in the investigation of blast-related traumatic brain injury. Frontiers in Neurology. 4: 16. PMID 23460082 DOI: 10.3389/fneur.2013.00016  0.64
2013 Liu W, Wang B, Wolfowitz R, Yeh PH, Nathan DE, Graner J, Tang H, Pan H, Harper J, Pham D, Oakes TR, French LM, Riedy G. Perfusion deficits in patients with mild traumatic brain injury characterized by dynamic susceptibility contrast MRI. Nmr in Biomedicine. 26: 651-63. PMID 23456696 DOI: 10.1002/nbm.2910  0.64
2012 Nathan DE, Wang BQ, Wolfowitz RD, Liu W, Yeh PH, Graner JL, Harper J, Pan H, Oakes TR, Riedy G. Examining intrinsic thalamic resting state networks using graph theory analysis: implications for mTBI detection. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2012: 5445-8. PMID 23367161 DOI: 10.1109/EMBC.2012.6347226  0.64
2012 Durning SJ, Graner J, Artino AR, Pangaro LN, Beckman T, Holmboe E, Oakes T, Roy M, Riedy G, Capaldi V, Walter R, van der Vleuten C, Schuwirth L. Using functional neuroimaging combined with a think-aloud protocol to explore clinical reasoning expertise in internal medicine. Military Medicine. 177: 72-8. PMID 23029866  0.64
2011 Gallagher CL, Johnson SC, Bendlin BB, Chung MK, Holden JE, Oakes TR, Brooks BR, Konopacki RA, Dogan S, Abbs JH, Xu G, Nickles RJ, Pyzalski RW, Dejesus OT, Brown WD. A longitudinal study of motor performance and striatal [18F]fluorodopa uptake in Parkinson's disease. Brain Imaging and Behavior. 5: 203-11. PMID 21556744 DOI: 10.1007/S11682-011-9124-5  0.64
2011 Gallagher CL, Oakes TR, Johnson SC, Chung MK, Holden JE, Bendlin BB, McLaren DG, Xu G, Nickles RJ, Pyzalski R, DeJesus O, Brown WD. Rate of 6-[18F]fluorodopa uptake decline in striatal subregions in Parkinson's disease. Movement Disorders : Official Journal of the Movement Disorder Society. 26: 614-20. PMID 21449008 DOI: 10.1002/Mds.23503  0.64
2010 Oler JA, Fox AS, Shelton SE, Rogers J, Dyer TD, Davidson RJ, Shelledy W, Oakes TR, Blangero J, Kalin NH. Amygdalar and hippocampal substrates of anxious temperament differ in their heritability. Nature. 466: 864-8. PMID 20703306 DOI: 10.1038/Nature09282  0.64
2010 Fox AS, Shelton SE, Oakes TR, Converse AK, Davidson RJ, Kalin NH. Orbitofrontal cortex lesions alter anxiety-related activity in the primate bed nucleus of stria terminalis. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 7023-7. PMID 20484644 DOI: 10.1523/Jneurosci.5952-09.2010  0.64
2010 Xu G, Rowley HA, Wu G, Alsop DC, Shankaranarayanan A, Dowling M, Christian BT, Oakes TR, Johnson SC. Reliability and precision of pseudo-continuous arterial spin labeling perfusion MRI on 3.0 T and comparison with 15O-water PET in elderly subjects at risk for Alzheimer's disease. Nmr in Biomedicine. 23: 286-93. PMID 19953503 DOI: 10.1002/Nbm.1462  0.64
2010 Jahn AL, Fox AS, Abercrombie HC, Shelton SE, Oakes TR, Davidson RJ, Kalin NH. Subgenual prefrontal cortex activity predicts individual differences in hypothalamic-pituitary-adrenal activity across different contexts. Biological Psychiatry. 67: 175-81. PMID 19846063 DOI: 10.1016/j.biopsych.2009.07.039  0.64
2010 Schuyler B, Ollinger JM, Oakes TR, Johnstone T, Davidson RJ. Dynamic Causal Modeling applied to fMRI data shows high reliability. Neuroimage. 49: 603-11. PMID 19619665 DOI: 10.1016/J.Neuroimage.2009.07.015  0.64
2009 Han D, Singh V, Lee JE, Zakszewski E, Adluru N, Oakes TR, Alexander A. An experimental evaluation of diffusion tensor image segmentation using graph-cuts. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 5653-6. PMID 19964408 DOI: 10.1109/IEMBS.2009.5333767  0.64
2009 Oler JA, Fox AS, Shelton SE, Christian BT, Murali D, Oakes TR, Davidson RJ, Kalin NH. Serotonin transporter availability in the amygdala and bed nucleus of the stria terminalis predicts anxious temperament and brain glucose metabolic activity. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 9961-6. PMID 19675230 DOI: 10.1523/Jneurosci.0795-09.2009  0.64
2009 Christian BT, Fox AS, Oler JA, Vandehey NT, Murali D, Rogers J, Oakes TR, Shelton SE, Davidson RJ, Kalin NH. Serotonin transporter binding and genotype in the nonhuman primate brain using [C-11]DASB PET. Neuroimage. 47: 1230-6. PMID 19505582 DOI: 10.1016/J.Neuroimage.2009.05.090  0.64
2009 McLaren DG, Kosmatka KJ, Oakes TR, Kroenke CD, Kohama SG, Matochik JA, Ingram DK, Johnson SC. A population-average MRI-based atlas collection of the rhesus macaque. Neuroimage. 45: 52-9. PMID 19059346 DOI: 10.1016/J.Neuroimage.2008.10.058  0.64
2009 Christian BT, Vandehey NT, Fox AS, Murali D, Oakes TR, Converse AK, Nickles RJ, Shelton SE, Davidson RJ, Kalin NH. The distribution of D2/D3 receptor binding in the adolescent rhesus monkey using small animal PET imaging. Neuroimage. 44: 1334-44. PMID 19015034 DOI: 10.1016/J.Neuroimage.2008.10.020  0.64
2008 Fox AS, Shelton SE, Oakes TR, Davidson RJ, Kalin NH. Trait-like brain activity during adolescence predicts anxious temperament in primates. Plos One. 3: e2570. PMID 18596957 DOI: 10.1371/journal.pone.0002570  0.64
2008 Kalin NH, Shelton SE, Fox AS, Rogers J, Oakes TR, Davidson RJ. The serotonin transporter genotype is associated with intermediate brain phenotypes that depend on the context of eliciting stressor. Molecular Psychiatry. 13: 1021-7. PMID 18414408 DOI: 10.1038/mp.2008.37  0.64
2008 Kelley DJ, Oakes TR, Greischar LL, Chung MK, Ollinger JM, Alexander AL, Shelton SE, Kalin NH, Davidson RJ. Automatic physiological waveform processing for FMRI noise correction and analysis. Plos One. 3: e1751. PMID 18347739 DOI: 10.1371/Journal.Pone.0001751  0.64
2008 Kern S, Oakes TR, Stone CK, McAuliff EM, Kirschbaum C, Davidson RJ. Glucose metabolic changes in the prefrontal cortex are associated with HPA axis response to a psychosocial stressor. Psychoneuroendocrinology. 33: 517-29. PMID 18337016 DOI: 10.1016/J.Psyneuen.2008.01.010  0.64
2008 Zhang C, Lu Y, Johnstone T, Oakes T, Davidson RJ. Efficient modeling and inference for event-related fMRI data Computational Statistics and Data Analysis. 52: 4859-4871. DOI: 10.1016/J.Csda.2008.03.033  0.64
2007 Oakes TR, Fox AS, Johnstone T, Chung MK, Kalin N, Davidson RJ. Integrating VBM into the General Linear Model with voxelwise anatomical covariates. Neuroimage. 34: 500-8. PMID 17113790 DOI: 10.1016/J.Neuroimage.2006.10.007  0.64
2007 Alexander AL, Lee JE, Lazar M, Boudos R, DuBray MB, Oakes TR, Miller JN, Lu J, Jeong EK, McMahon WM, Bigler ED, Lainhart JE. Diffusion tensor imaging of the corpus callosum in Autism. Neuroimage. 34: 61-73. PMID 17023185 DOI: 10.1016/J.Neuroimage.2006.08.032  0.64
2006 Johnstone T, van Reekum CM, Oakes TR, Davidson RJ. The voice of emotion: an FMRI study of neural responses to angry and happy vocal expressions. Social Cognitive and Affective Neuroscience. 1: 242-9. PMID 17607327 DOI: 10.1093/scan/nsl027  0.64
2006 Nacewicz BM, Dalton KM, Johnstone T, Long MT, McAuliff EM, Oakes TR, Alexander AL, Davidson RJ. Amygdala volume and nonverbal social impairment in adolescent and adult males with autism. Archives of General Psychiatry. 63: 1417-28. PMID 17146016 DOI: 10.1001/Archpsyc.63.12.1417  0.64
2006 Buchsbaum MS, Christian BT, Lehrer DS, Narayanan TK, Shi B, Mantil J, Kemether E, Oakes TR, Mukherjee J. D2/D3 dopamine receptor binding with [F-18]fallypride in thalamus and cortex of patients with schizophrenia. Schizophrenia Research. 85: 232-44. PMID 16713185 DOI: 10.1016/J.Schres.2006.03.042  0.64
2006 Johnstone T, Ores Walsh KS, Greischar LL, Alexander AL, Fox AS, Davidson RJ, Oakes TR. Motion correction and the use of motion covariates in multiple-subject fMRI analysis. Human Brain Mapping. 27: 779-88. PMID 16456818 DOI: 10.1002/Hbm.20219  0.64
2006 DeJesus OT, Flores LG, Converse AK, Bartlett RM, Murali D, Jeraj R, Oakes TR, Nickles RJ, Jaskowiak CJ. Assessing environmental chemical uptake in fetal brain in utero: A preliminary PET/CT study Journal of Radioanalytical and Nuclear Chemistry. 269: 561-564. DOI: 10.1007/S10967-006-0265-8  0.64
2006 Converse AK, Dejesus OT, Flores LG, Holden JE, Kelley AE, Moirano JM, Nickles RJ, Oakes TR, Roberts AD, Ruth TJ, Vandehey NT, Davidson RJ. Development of a dual tracer pet method for imaging dopaminergic neuromodulation Astroparticle, Particle and Space Physics, Detectors and Medical Physics Applications - Proceedings of the 9th Conference. 682-691.  0.64
2005 Oakes TR, Johnstone T, Ores Walsh KS, Greischar LL, Alexander AL, Fox AS, Davidson RJ. Comparison of fMRI motion correction software tools. Neuroimage. 28: 529-43. PMID 16099178 DOI: 10.1016/J.Neuroimage.2005.05.058  0.64
2005 DeJesus OT, Flores LG, Murali D, Converse AK, Bartlett RM, Barnhart TE, Oakes TR, Nickles RJ. Aromatic L-amino acid decarboxylase turnover in vivo in rhesus macaque striatum: a microPET study. Brain Research. 1054: 55-60. PMID 16055094 DOI: 10.1016/J.Brainres.2005.06.086  0.64
2005 Kalin NH, Shelton SE, Fox AS, Oakes TR, Davidson RJ. Brain regions associated with the expression and contextual regulation of anxiety in primates. Biological Psychiatry. 58: 796-804. PMID 16043132 DOI: 10.1016/j.biopsych.2005.05.021  0.64
2005 Lehrer DS, Christian BT, Mantil J, Murray AC, Buchsbaum BR, Oakes TR, Byne W, Kemether EM, Buchsbaum MS. Thalamic and prefrontal FDG uptake in never medicated patients with schizophrenia. The American Journal of Psychiatry. 162: 931-8. PMID 15863795 DOI: 10.1176/Appi.Ajp.162.5.931  0.64
2005 Johnstone T, Somerville LH, Alexander AL, Oakes TR, Davidson RJ, Kalin NH, Whalen PJ. Stability of amygdala BOLD response to fearful faces over multiple scan sessions. Neuroimage. 25: 1112-23. PMID 15850729 DOI: 10.1016/J.Neuroimage.2004.12.016  0.64
2005 Fox AS, Oakes TR, Shelton SE, Converse AK, Davidson RJ, Kalin NH. Calling for help is independently modulated by brain systems underlying goal-directed behavior and threat perception. Proceedings of the National Academy of Sciences of the United States of America. 102: 4176-9. PMID 15753316 DOI: 10.1073/Pnas.0409470102  0.64
2004 Ferrarelli F, Haraldsson HM, Barnhart TE, Roberts AD, Oakes TR, Massimini M, Stone CK, Kalin NH, Tononi G. A [17F]-fluoromethane PET/TMS study of effective connectivity. Brain Research Bulletin. 64: 103-13. PMID 15342097 DOI: 10.1016/J.Brainresbull.2004.04.020  0.64
2004 Oakes TR, Pizzagalli DA, Hendrick AM, Horras KA, Larson CL, Abercrombie HC, Schaefer SM, Koger JV, Davidson RJ. Functional coupling of simultaneous electrical and metabolic activity in the human brain. Human Brain Mapping. 21: 257-70. PMID 15038007 DOI: 10.1002/Hbm.20004  0.64
2004 Nitschke JB, Nelson EE, Rusch BD, Fox AS, Oakes TR, Davidson RJ. Orbitofrontal cortex tracks positive mood in mothers viewing pictures of their newborn infants. Neuroimage. 21: 583-92. PMID 14980560 DOI: 10.1016/J.Neuroimage.2003.10.005  0.64
2004 Pizzagalli DA, Oakes TR, Fox AS, Chung MK, Larson CL, Abercrombie HC, Schaefer SM, Benca RM, Davidson RJ. Functional but not structural subgenual prefrontal cortex abnormalities in melancholia. Molecular Psychiatry. 9: 325, 393-405. PMID 14699431 DOI: 10.1038/Sj.Mp.4001469  0.64
2003 Pizzagalli DA, Oakes TR, Davidson RJ. Coupling of theta activity and glucose metabolism in the human rostral anterior cingulate cortex: an EEG/PET study of normal and depressed subjects. Psychophysiology. 40: 939-49. PMID 14986847 DOI: 10.1111/1469-8986.00112  0.64
2003 DeJesus OT, Murali D, Flores LG, Converse AK, Dick DW, Oakes TR, Roberts AD, Nickles RJ. Snythesis of [F-18]-ZD1839 as a PET Imaging Agent for Epidermal Growth Factor Receptors Journal of Labelled Compounds and Radiopharmaceuticals. 46. DOI: 10.1002/Jlcr.750  0.64
2002 Pizzagalli DA, Nitschke JB, Oakes TR, Hendrick AM, Horras KA, Larson CL, Abercrombie HC, Schaefer SM, Koger JV, Benca RM, Pascual-Marqui RD, Davidson RJ. Brain electrical tomography in depression: the importance of symptom severity, anxiety, and melancholic features. Biological Psychiatry. 52: 73-85. PMID 12113998 DOI: 10.1016/S0006-3223(02)01313-6  0.64
2001 Rusch BD, Abercrombie HC, Oakes TR, Schaefer SM, Davidson RJ. Hippocampal morphometry in depressed patients and control subjects: relations to anxiety symptoms. Biological Psychiatry. 50: 960-4. PMID 11750892 DOI: 10.1016/S0006-3223(01)01248-3  0.64
2001 Pizzagalli D, Pascual-Marqui RD, Nitschke JB, Oakes TR, Larson CL, Abercrombie HC, Schaefer SM, Koger JV, Benca RM, Davidson RJ. Anterior cingulate activity as a predictor of degree of treatment response in major depression: evidence from brain electrical tomography analysis. The American Journal of Psychiatry. 158: 405-15. PMID 11229981 DOI: 10.1176/Appi.Ajp.158.3.405  0.64
2001 Schueller MJ, Mulnix TL, Christian BT, Jensen M, Holm S, Oakes TR, Roberts AD, Dick DW, Martin CC, Nickles RJ. Addressing the third gamma problem in PET Ieee Nuclear Science Symposium and Medical Imaging Conference. 3: 1286-1289. DOI: 10.1109/TNS.2002.807868  0.64
2001 Schueller MJ, Mulnix TL, Christian BT, Jensen M, Holm S, Oakes TR, Roberts AD, Dick DW, Martin CC, Nickles RJ. Addressing the third gamma problem in PET Ieee Nuclear Science Symposium and Medical Imaging Conference. 3: 1286-1289.  0.64
2001 Oakes TR, Christian BT, Roberts AD, Pyzalski RW, Holden JE, Brown T, Brown WD, Nickles RJ, Davidson RJ. Multi-scanner PET 2D/3D comparison with cerebral FDG Ieee Nuclear Science Symposium and Medical Imaging Conference. 3: 1272-1276.  0.64
2000 Schaefer SM, Abercrombie HC, Lindgren KA, Larson CL, Ward RT, Oakes TR, Holden JE, Perlman SB, Turski PA, Davidson RJ. Six-month test-retest reliability of MRI-defined PET measures of regional cerebral glucose metabolic rate in selected subcortical structures. Human Brain Mapping. 10: 1-9. PMID 10843513 DOI: 10.1002/(Sici)1097-0193(200005)10:1<1::Aid-Hbm10>3.0.Co;2-O  0.64
1999 Brown WD, Taylor MD, Roberts AD, Oakes TR, Schueller MJ, Holden JE, Malischke LM, DeJesus OT, Nickles RJ. FluoroDOPA PET shows the nondopaminergic as well as dopaminergic destinations of levodopa. Neurology. 53: 1212-8. PMID 10522875 DOI: 10.1212/Wnl.53.6.1212  0.64
1999 Lindgren KA, Larson CL, Schaefer SM, Abercrombie HC, Ward RT, Oakes TR, Holden JE, Perlman SB, Benca RM, Davidson RJ. Thalamic metabolic rate predicts EEG alpha power in healthy control subjects but not in depressed patients. Biological Psychiatry. 45: 943-52. PMID 10386175 DOI: 10.1016/S0006-3223(98)00350-3  0.64
1998 Abercrombie HC, Schaefer SM, Larson CL, Oakes TR, Lindgren KA, Holden JE, Perlman SB, Turski PA, Krahn DD, Benca RM, Davidson RJ. Metabolic rate in the right amygdala predicts negative affect in depressed patients. Neuroreport. 9: 3301-7. PMID 9831467 DOI: 10.1097/00001756-199810050-00028  0.64
1998 Brown WD, Oakes TR, DeJesus OT, Taylor MD, Roberts AD, Nickles RJ, Holden JE. Fluorine-18-fluoro-L-DOPA dosimetry with carbidopa pretreatment. Journal of Nuclear Medicine : Official Publication, Society of Nuclear Medicine. 39: 1884-91. PMID 9829576  0.64
1994 DeJesus OT, Murali D, Kitchen R, Endres C, Oakes TR, Shelton SE, Freund L, Houser D, Uno H, Holden JE. Evaluation of 3-[18F]fluoro-alpha-fluoromethyl-p-tyrosine as a tracer for striatal tyrosine hydroxylase activity. Nuclear Medicine and Biology. 21: 663-7. PMID 9234325 DOI: 10.1016/0969-8051(94)90033-7  0.64
1993 De Jesus OT, Murali D, Kitchen R, Oakes TR, Nickles RJ. Direct synthesis of 3-fluoro-α-fluoromethyl-p-tyrosine Journal of Fluorine Chemistry. 65: 73-77. DOI: 10.1016/S0022-1139(00)80476-5  0.64
Low-probability matches
2020 Martin CE, Shadowen C, Thakkar B, Oakes T, Gal TS, Moeller FG. Buprenorphine dosing for the treatment of opioid use disorder through pregnancy and postpartum. Current Treatment Options in Psychiatry. 7: 375-399. PMID 33585165 DOI: 10.1007/S40501-020-00221-Z  0.16
2021 Stauffer VL, Oakes TM, Rettiganti M, Day KA, Camporeale A. Efficacy and safety of galcanezumab for preventive treatment of migraine: a systematic review and meta-analysis. Journal of Neurology. PMID 33590341 DOI: 10.1007/s00415-021-10416-w  0.01
2021 Ronel T, Harries M, Wicks K, Oakes T, Singleton H, Dearman R, Maxwell G, Chain B. The clonal structure and dynamics of the human T cell response to an organic chemical hapten. Elife. 10. PMID 33432924 DOI: 10.7554/eLife.54747  0.01
2020 Kudrow D, Andrews JS, Rettiganti M, Oakes T, Bardos J, Gaul C, Riesenberg R, Wenzel R, Kuruppu D, Martinez J. Treatment Outcomes in Patients Treated With Galcanezumab vs Placebo: Post Hoc Analyses From a Phase 3 Randomized Study in Patients With Episodic Cluster Headache. Headache. PMID 33179263 DOI: 10.1111/head.14011  0.01
2020 Barennes P, Quiniou V, Shugay M, Egorov ES, Davydov AN, Chudakov DM, Uddin I, Ismail M, Oakes T, Chain B, Eugster A, Kashofer K, Rainer PP, Darko S, Ransier A, et al. Benchmarking of T cell receptor repertoire profiling methods reveals large systematic biases. Nature Biotechnology. PMID 32895550 DOI: 10.1038/s41587-020-0656-3  0.01
2020 Sterling RK, Oakes T, Gal TS, Stevens MP, deWit M, Sanyal AJ. The FIB-4 Index Is Associated with Need for Mechanical Ventilation and 30-day Mortality in Patients Admitted with COVID-19. The Journal of Infectious Diseases. PMID 32856702 DOI: 10.1093/infdis/jiaa550  0.01
2020 Joshi K, de Massy MR, Ismail M, Reading JL, Uddin I, Woolston A, Hatipoglu E, Oakes T, Rosenthal R, Peacock T, Ronel T, Noursadeghi M, Turati V, Furness AJS, Georgiou A, et al. Publisher Correction: Spatial heterogeneity of the T cell receptor repertoire reflects the mutational landscape in lung cancer. Nature Medicine. PMID 32494063 DOI: 10.1038/S41591-020-0866-8  0.01
2020 Vasiloiu LM, Oakes THE, Carollo F, Garrahan JP. Trajectory phase transitions in noninteracting spin systems. Physical Review. E. 101: 042115. PMID 32422782 DOI: 10.1103/PhysRevE.101.042115  0.01
2020 de Greef PC, Oakes T, Gerritsen B, Ismail M, Heather JM, Hermsen R, Chain B, de Boer RJ. The naive T-cell receptor repertoire has an extremely broad distribution of clone sizes. Elife. 9. PMID 32187010 DOI: 10.7554/eLife.49900  0.01
2020 Bangs ME, Kudrow D, Wang S, Oakes TM, Terwindt GM, Magis D, Yunes-Medina L, Stauffer VL. Correction to: Safety and tolerability of monthly galcanezumab injections in patients with migraine: integrated results from migraine clinical studies. Bmc Neurology. 20: 90. PMID 32169042 DOI: 10.1186/s12883-020-01675-7  0.01
2020 Dodick DW, Goadsby PJ, Lucas C, Jensen R, Bardos JN, Martinez JM, Zhou C, Aurora SK, Yang JY, Conley RR, Oakes T. Phase 3 randomized, placebo-controlled study of galcanezumab in patients with chronic cluster headache: Results from 3-month double-blind treatment. Cephalalgia : An International Journal of Headache. 333102420905321. PMID 32050782 DOI: 10.1177/0333102420905321  0.01
2020 Bangs ME, Kudrow D, Wang S, Oakes TM, Terwindt GM, Magis D, Yunes-Medina L, Stauffer VL. Safety and tolerability of monthly galcanezumab injections in patients with migraine: integrated results from migraine clinical studies. Bmc Neurology. 20: 25. PMID 31952501 DOI: 10.1186/s12883-020-1609-7  0.01
2020 Patel JB, Wilson SH, Oakes TR, Santhanam P, Weaver LK. Structural and Volumetric Brain MRI Findings in Mild Traumatic Brain Injury. Ajnr. American Journal of Neuroradiology. PMID 31896572 DOI: 10.3174/ajnr.A6346  0.01
2019 Oakes TM, Kovacs R, Rosen N, Doty E, Kemmer P, Aurora SK, Camporeale A. Evaluation of Cardiovascular Outcomes in Adult Patients With Episodic or Chronic Migraine Treated With Galcanezumab: Data From Three Phase 3, Randomized, Double-Blind, Placebo-Controlled EVOLVE-1, EVOLVE-2, and REGAIN Studies. Headache. PMID 31721185 DOI: 10.1111/head.13684  0.01
2019 Joshi K, Robert de Massy M, Ismail M, Reading JL, Uddin I, Woolston A, Hatipoglu E, Oakes T, Rosenthal R, Peacock T, Ronel T, Noursadeghi M, Turati V, Furness AJS, Georgiou A, et al. Spatial heterogeneity of the T cell receptor repertoire reflects the mutational landscape in lung cancer. Nature Medicine. PMID 31591606 DOI: 10.1038/S41591-019-0592-2  0.01
2019 Santhanam P, Meehan A, Orrison WW, Wilson SH, Oakes TR, Weaver LK. Central auditory processing disorders after mild traumatic brain injury. Undersea & Hyperbaric Medicine : Journal of the Undersea and Hyperbaric Medical Society, Inc. 46: 261-269. PMID 31394597  0.01
2019 Goadsby PJ, Dodick DW, Leone M, Bardos JN, Oakes TM, Millen BA, Zhou C, Dowsett SA, Aurora SK, Ahn AH, Yang JY, Conley RR, Martinez JM. Trial of Galcanezumab in Prevention of Episodic Cluster Headache. The New England Journal of Medicine. 381: 132-141. PMID 31291515 DOI: 10.1056/Nejmoa1813440  0.01
2019 Santhanam P, Wilson SH, Mulatya C, Oakes TR, Weaver L. Age-accelerated reduction in cortical surface area in U.S. service members and veterans with mild traumatic brain injury and post-traumatic stress disorder. Journal of Neurotrauma. PMID 31094282 DOI: 10.1089/neu.2018.6242  0.01
2019 Goadsby PJ, Dodick DW, Martinez JM, Ferguson MB, Oakes TM, Zhang Q, Skljarevski V, Aurora SK. Onset of efficacy and duration of response of galcanezumab for the prevention of episodic migraine: a post-hoc analysis. Journal of Neurology, Neurosurgery, and Psychiatry. PMID 31004075 DOI: 10.1136/jnnp-2018-320242  0.01
2019 Santhanam P, Wilson SH, Oakes TR, Weaver LK. Effects of mild traumatic brain injury and post-traumatic stress disorder on resting-state default mode network connectivity. Brain Research. PMID 30641036 DOI: 10.1016/j.brainres.2019.01.015  0.01
2019 Uddin I, Joshi K, Oakes T, Heather JM, Swanton C, Chain B. An Economical, Quantitative, and Robust Protocol for High-Throughput T Cell Receptor Sequencing from Tumor or Blood. Methods in Molecular Biology (Clifton, N.J.). 1884: 15-42. PMID 30465193 DOI: 10.1007/978-1-4939-8885-3_2  0.01
2018 Santhanam P, Wilson SH, Oakes TR, Weaver LK. Accelerated age-related cortical thinning in mild traumatic brain injury. Brain and Behavior. e01161. PMID 30488646 DOI: 10.1002/brb3.1161  0.01
2018 Gkazi AS, Margetts BK, Attenborough T, Mhaldien L, Standing JF, Oakes T, Heather JM, Booth J, Pasquet M, Chiesa R, Veys P, Klein N, Chain B, Callard R, Adams SP. Clinical T Cell Receptor Repertoire Deep Sequencing and Analysis: An Application to Monitor Immune Reconstitution Following Cord Blood Transplantation. Frontiers in Immunology. 9: 2547. PMID 30455696 DOI: 10.3389/fimmu.2018.02547  0.01
2018 Wong YNS, Joshi K, Khetrapal P, Ismail M, Reading JL, Sunderland MW, Georgiou A, Furness AJS, Ben Aissa A, Ghorani E, Oakes T, Uddin I, Tan WS, Feber A, McGovern U, et al. Urine-derived lymphocytes as a non-invasive measure of the bladder tumor immune microenvironment. The Journal of Experimental Medicine. PMID 30257862 DOI: 10.1084/Jem.20181003  0.01
2018 Santhanam P, Teslovich T, Wilson SH, Yeh PH, Oakes TR, Weaver L. Decreases in white matter integrity of ventrolimbic pathway linked to posttraumatic stress disorder in mild traumatic brain injury. Journal of Neurotrauma. PMID 30039740 DOI: 10.1089/Neu.2017.5541  0.01
2018 Oakes TMM, Skljarevsuki V, Zhang Q, Kielbasa W, Hodsdon ME, Detke HC, Camporeale A, Saper JR. Safety of galcanezumab in patients with episodic migraine: A randomized placebo-controlled dose-ranging Phase 2b study. Cephalalgia : An International Journal of Headache. 333102417747230. PMID 29310444 DOI: 10.1177/0333102417747230  0.01
2017 Skljarevski V, Oakes TM, Zhang Q, Ferguson MB, Martinez J, Camporeale A, Johnson KW, Shan Q, Carter J, Schacht A, Goadsby PJ, Dodick DW. Effect of Different Doses of Galcanezumab vs Placebo for Episodic Migraine Prevention: A Randomized Clinical Trial. Jama Neurology. PMID 29255900 DOI: 10.1001/jamaneurol.2017.3859  0.01
2017 Oakes T, Heather JM, Best K, Byng-Maddick R, Husovsky C, Ismail M, Joshi K, Maxwell G, Noursadeghi M, Riddell N, Ruehl T, Turner CT, Uddin I, Chain B. Quantitative Characterization of the T Cell Receptor Repertoire of Naïve and Memory Subsets Using an Integrated Experimental and Computational Pipeline Which Is Robust, Economical, and Versatile. Frontiers in Immunology. 8: 1267. PMID 29075258 DOI: 10.3389/fimmu.2017.01267  0.01
2017 Nathan DE, Bellgowan JF, French LM, Wolf JP, Oakes T, Mielke JB, Sham EB, Liu W, Riedy G. Assessing the Impact of Post Traumatic Stress Symptoms on Resting State Function Networks in a Military Chronic Mild Traumatic Brain Injury Sample. Brain Connectivity. PMID 28316248 DOI: 10.1089/brain.2016.0433  0.01
2017 Oakes T, Popple AL, Williams J, Best K, Heather JM, Ismail M, Maxwell G, Gellatly N, Dearman RJ, Kimber I, Chain B. The T Cell Response to the Contact Sensitizer Paraphenylenediamine Is Characterized by a Polyclonal Diverse Repertoire of Antigen-Specific Receptors. Frontiers in Immunology. 8: 162. PMID 28261218 DOI: 10.3389/fimmu.2017.00162  0.01
2017 Heather JM, Ismail M, Oakes T, Chain B. High-throughput sequencing of the T-cell receptor repertoire: pitfalls and opportunities. Briefings in Bioinformatics. PMID 28077404 DOI: 10.1093/bib/bbw138  0.01
2016 Yeh PH, Guan Koay C, Wang B, Morissette J, Sham E, Senseney J, Joy D, Kubli A, Yeh CH, Eskay V, Liu W, French LM, Oakes TR, Riedy G, Ollinger J. Compromised Neurocircuitry in Chronic Blast-Related Mild Traumatic Brain Injury. Human Brain Mapping. PMID 27629984 DOI: 10.1002/hbm.23365  0.01
2016 Oakes T, Garrahan JP, Powell S. Emergence of cooperative dynamics in fully packed classical dimers. Physical Review. E. 93: 032129. PMID 27078314 DOI: 10.1103/PhysRevE.93.032129  0.01
2016 Nathan DE, Bellgowan JF, Oakes T, French LM, Nadar SR, Sham EB, Liu W, Riedy G. Assessing quantitative changes in intrinsic thalamic networks in blast and non-blast Mild TBI: Implications for mechanisms of injury. Brain Connectivity. PMID 26956452 DOI: 10.1089/brain.2015.0403  0.01
2015 Heather JM, Best K, Oakes T, Gray ER, Roe JK, Thomas N, Friedman N, Noursadeghi M, Chain B. Dynamic Perturbations of the T-Cell Receptor Repertoire in Chronic HIV Infection and following Antiretroviral Therapy. Frontiers in Immunology. 6: 644. PMID 26793190 DOI: 10.3389/fimmu.2015.00644  0.01
2015 Best K, Oakes T, Heather JM, Shawe-Taylor J, Chain B. Computational analysis of stochastic heterogeneity in PCR amplification efficiency revealed by single molecule barcoding. Scientific Reports. 5: 14629. PMID 26459131 DOI: 10.1038/srep14629  0.01
2015 Martinez JM, Ferguson MB, Pangallo BA, Oakes TM, Sparks J, Dellva MA, Zhang Q, Liu P, Bangs M, Ahl J, Goldberger C. Safety and tolerability of edivoxetine as adjunctive treatment to selective serotonin reuptake inhibitor antidepressants for patients with major depressive disorder. Drugs in Context. 4: 212279. PMID 26005493 DOI: 10.7573/dic.212279  0.01
2015 Oakes TM, Dellva MA, Waterman K, Greenbaum M, Poppe C, Goldberger C, Ahl J, Perahia DG. Edivoxetine compared to placebo as adjunctive therapy to selective serotonin reuptake inhibitors in the prevention of symptom re-emergence in major depressive disorder. Current Medical Research and Opinion. 31: 1179-89. PMID 25894953 DOI: 10.1185/03007995.2015.1037732  0.01
2015 Lange R, Yeh P, Oakes T, Riedy G, Ollinger J, French L. A-65Diffusion Tensor Imaging and Postconcussion Symptom Reporting in US Military Service Members Following Mild to Moderate Traumatic Brain Injury Archives of Clinical Neuropsychology. 30: 509.2-509. DOI: 10.1093/ARCLIN/ACV047.65  0.01
2014 Robinson M, Oakes TM, Raskin J, Liu P, Shoemaker S, Nelson JC. Acute and long-term treatment of late-life major depressive disorder: duloxetine versus placebo. The American Journal of Geriatric Psychiatry : Official Journal of the American Association For Geriatric Psychiatry. 22: 34-45. PMID 24314888 DOI: 10.1016/J.Jagp.2013.01.019  0.01
2013 Nelson JC, Oakes TM, Liu P, Ahl J, Bangs ME, Raskin J, Perahia DG, Robinson MJ. Assessment of falls in older patients treated with duloxetine: a secondary analysis of a 24-week randomized, placebo-controlled trial. The Primary Care Companion For Cns Disorders. 15. PMID 23724353 DOI: 10.4088/Pcc.12M01419  0.01
2013 Oakes TM, Katona C, Liu P, Robinson M, Raskin J, Greist JH. Safety and tolerability of duloxetine in elderly patients with major depressive disorder: a pooled analysis of two placebo-controlled studies. International Clinical Psychopharmacology. 28: 1-11. PMID 23138680 DOI: 10.1097/Yic.0B013E32835B09Cd  0.01
2012 Oakes TM, Myers AL, Marangell LB, Ahl J, Prakash A, Thase ME, Kornstein SG. Assessment of depressive symptoms and functional outcomes in patients with major depressive disorder treated with duloxetine versus placebo: primary outcomes from two trials conducted under the same protocol. Human Psychopharmacology. 27: 47-56. PMID 22241678 DOI: 10.1002/hup.1262  0.01
2012 Spahr AJ, Dorman MF, Litvak LM, Van Wie S, Gifford RH, Loizou PC, Loiselle LM, Oakes T, Cook S. Development and validation of the AzBio sentence lists. Ear and Hearing. 33: 112-7. PMID 21829134 DOI: 10.1097/Aud.0B013E31822C2549  0.01
2012 Yeh P, Oakes TR, Riedy G. Diffusion Tensor Imaging and Its Application to Traumatic Brain Injury: Basic Principles and Recent Advances Open Journal of Medical Imaging. 2: 137-161. DOI: 10.4236/OJMI.2012.24025  0.01
2010 Hall JA, Wang F, Oakes TM, Utterback BG, Crucitti A, Acharya N. Safety and tolerability of duloxetine in the acute management of diabetic peripheral neuropathic pain: analysis of pooled data from three placebo-controlled clinical trials. Expert Opinion On Drug Safety. 9: 525-37. PMID 20465525 DOI: 10.1517/14740338.2010.484418  0.01
2010 DEJESUS OT, MURALI D, KITCHEN R, OAKES TR, NICKLES RJ. ChemInform Abstract: Direct Synthesis of 3-Fluoro-α-fluoromethyl-p-tyrosine. Cheminform. 25: no-no. DOI: 10.1002/chin.199410249  0.01
2009 Wohlreich MM, Sullivan MD, Mallinckrodt CH, Chappell AS, Oakes TM, Watkin JG, Raskin J. Duloxetine for the treatment of recurrent major depressive disorder in elderly patients: treatment outcomes in patients with comorbid arthritis. Psychosomatics. 50: 402-12. PMID 19687181 DOI: 10.1176/appi.psy.50.4.402  0.01
2009 Schuyler B, Oakes T, Johnstone T, Ollinger J, Davidson R. Dynamic Causal Modeling is Highly Reliable Across Scans Neuroimage. 47: S169. DOI: 10.1016/S1053-8119(09)71813-0  0.01
2009 Ollinger J, Oakes T, Haeberli F, Alexander A, Davidson R. Path-Length as a Metric for Subject Motion Neuroimage. 47. DOI: 10.1016/S1053-8119(09)71162-0  0.01
2009 Ollinger J, Oakes T, Alexander A, Haeberli F, Dalton K, Davidson R. The Secret Life of Motion Covariates Neuroimage. 47. DOI: 10.1016/S1053-8119(09)71160-7  0.01
2009 Hanson J, Oakes T, Sutterer M, Schaefer S, Nacewicz B, Kirkland J, Pollak S, Davidson R. A comparison of automated volumetric methods and hand-tracing of the hippocampus and amygdala Neuroimage. 47. DOI: 10.1016/S1053-8119(09)71154-1  0.01
2009 Fox A, Shelton S, Alexander A, Oakes T, Shackman A, Davidson R, Kalin N. Diffusion Tensor Imaging (DTI) Demonstrates that Prefrontal-Amygdala White-Matter Tracts Relate to Anxious Temperament and Amygdala Metabolism Neuroimage. 47. DOI: 10.1016/S1053-8119(09)70094-1  0.01
2007 Maletic V, Robinson M, Oakes T, Iyengar S, Ball SG, Russell J. Neurobiology of depression: an integrated view of key findings. International Journal of Clinical Practice. 61: 2030-40. PMID 17944926 DOI: 10.1111/j.1742-1241.2007.01602.x  0.01
2007 Sklan EH, Staschke K, Oakes TM, Elazar M, Winters M, Aroeti B, Danieli T, Glenn JS. A Rab-GAP TBC domain protein binds hepatitis C virus NS5A and mediates viral replication. Journal of Virology. 81: 11096-105. PMID 17686842 DOI: 10.1128/Jvi.01249-07  0.01
2006 Kelley DJ, Bhattacharyya A, Yin JC, Oakes TR, Chung ML, Dalton KM, Christian BT, Davidson RJ. 67 ABNORMAL CYCLIC ADENOSINE MONOPHOSPHATE PRODUCTION IN HUMAN CORTICAL FRAGILE X NEURAL TISSUE: A PROOF OF PRINCIPLE STUDY. Journal of Investigative Medicine. 54: S354.5-S354. DOI: 10.2310/6650.2005.X0015.66  0.01
2005 Zhao Q, Philpott RT, Oakes TD, Conte ED. Determination of polyaromatic hydrocarbons in river water using a sorbent consisting of removable octadecyltrimethylammonium ions attached to cation exchange silica in conjunction with commercial C18 silica. The Analyst. 130: 750-4. PMID 15852147 DOI: 10.1039/b417785a  0.01
2005 Converse AK, Barnhart TE, Dallas CB, Jivan S, Larson JA, Oakes TR, Roberts AD, Ruth TJ, Vandehey NT, Schneider ML. [11C]raclopride imaging of dopamine release in rhesus monkeys Journal of Cerebral Blood Flow & Metabolism. 25: S647-S647. DOI: 10.1038/Sj.Jcbfm.9591524.0647  0.01
2005 Barnhart TE, Converse AK, Oakes TR, Nye JA, Dick DW, Murali D, Ferrarelli F, Massimini M, Tononi G, Schneider ML, Larsen JA, Mukherjee J, Stone CK, DeJesus OT, Nickles RJ, et al. Methodological development of dynamic dopamine release using [18F]desmethoxyfallypride Journal of Cerebral Blood Flow & Metabolism. 25: S612-S612. DOI: 10.1038/Sj.Jcbfm.9591524.0612  0.01
2001 Nelson EE, Nitschke JB, Rusch BD, Oakes TR, Anderle MJ, Ferber KL, Pederson AJ, Davidson RJ. Motherly love: An fMRI study of mothers viewing pictures of their infants Neuroimage. 13: 450. DOI: 10.1016/S1053-8119(01)91793-8  0.01
2001 Oakes TR, Pizzagalli D, Hendrick A, Horras K, Larson C, Abercrombie H, Schaefer S, Koger J, Davidson RJ. Simultaneous FDG-PET and 3D tomographic EEG in resting brain Neuroimage. 13: 36. DOI: 10.1016/S1053-8119(01)91379-5  0.01
2000 Oakes T, Holden J, Pyzalski R, Roberts A, Brown W, Nickles R, Davidson R. Comparison of 2D and 3D PET for cerebral FDG in human subjects Ieee Transactions On Nuclear Science. 47: 1233-1241. DOI: 10.1109/23.856577  0.01
1998 Sossi V, Oakes TR, Ruth TJ. A phantom study evaluating the quantitative aspect of 3D PET imaging of the brain. Physics in Medicine and Biology. 43: 2615-30. PMID 9755949 DOI: 10.1088/0031-9155/43/9/013  0.01
1998 Oakes TR, Sossi V, Ruth TJ. Normalization for 3D PET with a low-scatter planar source and measured geometric factors. Physics in Medicine and Biology. 43: 961-72. PMID 9572519 DOI: 10.1088/0031-9155/43/4/023  0.01
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