Year |
Citation |
Score |
2022 |
Markova DN, Ruma FB, Casola C, Mirsalehi A, Betrán E. Recurrent co-domestication of PIF/Harbinger transposable element proteins in insects. Mobile Dna. 13: 28. PMID 36451208 DOI: 10.1186/s13100-022-00282-2 |
0.512 |
|
2021 |
Li J, West JB, Hart A, Wegrzyn JL, Smith MA, Domec JC, Loopstra CA, Casola C. Extensive Variation in Drought-Induced Gene Expression Changes Between Loblolly Pine Genotypes. Frontiers in Genetics. 12: 661440. PMID 34140968 DOI: 10.3389/fgene.2021.661440 |
0.346 |
|
2019 |
Casola C, Lawing AM. The nonrandom evolution of gene families. American Journal of Botany. 106: 14-17. PMID 30597524 DOI: 10.1002/ajb2.1211 |
0.373 |
|
2018 |
Casola C. From De Novo to "De Nono": The Majority of Novel Protein-Coding Genes Identified with Phylostratigraphy Are Old Genes or Recent Duplicates. Genome Biology and Evolution. 10: 2906-2918. PMID 30346517 DOI: 10.1093/gbe/evy231 |
0.527 |
|
2018 |
Casola C, Koralewski TE. Pinaceae show elevated rates of gene turnover that are robust to incomplete gene annotation. The Plant Journal : For Cell and Molecular Biology. PMID 29901849 DOI: 10.1111/Tpj.13994 |
0.601 |
|
2017 |
Cossu RM, Casola C, Giacomello S, Vidalis A, Scofield DG, Zuccolo A. LTR Retrotransposons Show Low Levels of Unequal Recombination and High Rates of Intraelement Gene Conversion in Large Plant Genomes. Genome Biology and Evolution. 9: 3449-3462. PMID 29228262 DOI: 10.1093/Gbe/Evx260 |
0.554 |
|
2017 |
Neale DB, McGuire PE, Wheeler NC, Stevens KA, Crepeau MW, Cardeno C, Zimin AV, Puiu D, Pertea GM, Sezen UU, Casola C, Koralewski TE, Paul R, Gonzalez-Ibeas D, Zaman S, et al. The Douglas-Fir Genome Sequence Reveals Specialization of the Photosynthetic Apparatus in Pinaceae. G3 (Bethesda, Md.). PMID 28751502 DOI: 10.1534/G3.117.300078 |
0.514 |
|
2017 |
Casola C, Betrán E. The genomic impact of gene retrocopies: what have we learned from comparative genomics, population genomics and transcriptomic analyses? Genome Biology and Evolution. PMID 28605529 DOI: 10.1093/Gbe/Evx081 |
0.591 |
|
2016 |
Lin X, Faridi N, Casola C. An Ancient Transkingdom Horizontal Transfer of Penelope-Like Retroelements from Arthropods to Conifers. Genome Biology and Evolution. 8: 1252-1266. PMID 27190138 DOI: 10.1093/Gbe/Evw076 |
0.449 |
|
2016 |
Casola C. TP53 Gene and Cancer Resistance in Elephants. Jama. 315: 1788-9. PMID 27115383 DOI: 10.1001/Jama.2016.0440 |
0.355 |
|
2014 |
Carbone L, Harris RA, Gnerre S, Veeramah KR, Lorente-Galdos B, Huddleston J, Meyer TJ, Herrero J, Roos C, Aken B, Anaclerio F, Archidiacono N, Baker C, Barrell D, Batzer MA, ... ... Casola C, et al. Gibbon genome and the fast karyotype evolution of small apes. Nature. 513: 195-201. PMID 25209798 DOI: 10.1038/Nature13679 |
0.504 |
|
2012 |
Casola C, Conant GC, Hahn MW. Very low rate of gene conversion in the yeast genome. Molecular Biology and Evolution. 29: 3817-26. PMID 22844073 DOI: 10.1093/molbev/mss192 |
0.515 |
|
2012 |
Casola C, Zekonyte U, Phillips AD, Cooper DN, Hahn MW. IntErlocus gene conversion events introduce deleterious mutations into at least 1% of human genes associated with inherited disease Genome Research. 22: 429-435. PMID 22090377 DOI: 10.1101/Gr.127738.111 |
0.459 |
|
2012 |
Emera D, Casola C, Lynch VJ, Wildman DE, Agnew D, Wagner GP. Convergent evolution of endometrial prolactin expression in primates, mice, and elephants through the independent recruitment of transposable elements. Molecular Biology and Evolution. 29: 239-47. PMID 21813467 DOI: 10.1093/Molbev/Msr189 |
0.442 |
|
2011 |
Marracci S, Michelotti V, Casola C, Giacoma C, Ragghianti M. Daz- and pumilio-like genes are asymmetrically localized in Pelophylax (Rana) oocytes and are expressed during early spermatogenesis. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 316: 330-8. PMID 21344644 DOI: 10.1002/Jez.B.21405 |
0.458 |
|
2011 |
Colbourne JK, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Cáceres CE, Carmel L, Casola C, Choi JH, et al. The ecoresponsive genome of Daphnia pulex. Science (New York, N.Y.). 331: 555-61. PMID 21292972 DOI: 10.1126/Science.1197761 |
0.69 |
|
2011 |
Locke DP, Hillier LW, Warren WC, Worley KC, Nazareth LV, Muzny DM, Yang SP, Wang Z, Chinwalla AT, Minx P, Mitreva M, Cook L, Delehaunty KD, Fronick C, Schmidt H, ... ... Casola C, et al. Comparative and demographic analysis of orang-utan genomes. Nature. 469: 529-33. PMID 21270892 DOI: 10.1038/Nature09687 |
0.474 |
|
2010 |
Arensburger P, Megy K, Waterhouse RM, Abrudan J, Amedeo P, Antelo B, Bartholomay L, Bidwell S, Caler E, Camara F, Campbell CL, Campbell KS, Casola C, Castro MT, Chandramouliswaran I, et al. Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics. Science (New York, N.Y.). 330: 86-8. PMID 20929810 DOI: 10.1126/Science.1191864 |
0.653 |
|
2010 |
Casola C, Ganote CL, Hahn MW. Nonallelic gene conversion in the genus Drosophila. Genetics. 185: 95-103. PMID 20215470 DOI: 10.1534/Genetics.110.115444 |
0.589 |
|
2009 |
Bustos O, Naik S, Ayers G, Casola C, Perez-Lamigueiro MA, Chippindale PT, Pritham EJ, de la Casa-Esperón E. Evolution of the Schlafen genes, a gene family associated with embryonic lethality, meiotic drive, immune processes and orthopoxvirus virulence. Gene. 447: 1-11. PMID 19619625 DOI: 10.1016/J.Gene.2009.07.006 |
0.526 |
|
2009 |
Casola C, Hahn MW. Gene conversion among paralogs results in moderate false detection of positive selection using likelihood methods. Journal of Molecular Evolution. 68: 679-87. PMID 19471989 DOI: 10.1007/S00239-009-9241-6 |
0.467 |
|
2009 |
Han MV, Demuth JP, McGrath CL, Casola C, Hahn MW. Adaptive evolution of young gene duplicates in mammals. Genome Research. 19: 859-67. PMID 19411603 DOI: 10.1101/Gr.085951.108 |
0.586 |
|
2009 |
McGrath CL, Casola C, Hahn MW. Minimal effect of ectopic gene conversion among recent duplicates in four mammalian genomes. Genetics. 182: 615-22. PMID 19307604 DOI: 10.1534/Genetics.109.101428 |
0.597 |
|
2009 |
Bai Y, Casola C, Betrán E. Quality of regulatory elements in Drosophila retrogenes. Genomics. 93: 83-9. PMID 18848618 DOI: 10.1016/J.Ygeno.2008.09.006 |
0.482 |
|
2008 |
Bai Y, Casola C, Betrán E. Evolutionary origin of regulatory regions of retrogenes in Drosophila. Bmc Genomics. 9: 241. PMID 18498650 DOI: 10.1186/1471-2164-9-241 |
0.486 |
|
2008 |
Casola C, Hucks D, Feschotte C. Convergent domestication of pogo-like transposases into centromere-binding proteins in fission yeast and mammals. Molecular Biology and Evolution. 25: 29-41. PMID 17940212 DOI: 10.1093/Molbev/Msm221 |
0.609 |
|
2008 |
Marracci S, Casola C, Bucci S, Mancino G, Ragghianti M. Isolation and expression ofRlYB2, a germ cell‐specificY‐boxgene inRana Italian Journal of Zoology. 75: 1-9. DOI: 10.1080/11250000701690616 |
0.468 |
|
2007 |
Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H. Transposase-derived transcription factors regulate light signaling in Arabidopsis. Science (New York, N.Y.). 318: 1302-5. PMID 18033885 DOI: 10.1126/Science.1146281 |
0.535 |
|
2007 |
Casola C, Lawing AM, Betrán E, Feschotte C. PIF-like transposons are common in drosophila and have been repeatedly domesticated to generate new host genes. Molecular Biology and Evolution. 24: 1872-88. PMID 17556756 DOI: 10.1093/Molbev/Msm116 |
0.701 |
|
2007 |
Ragghianti M, Bucci S, Marracci S, Casola C, Mancino G, Hotz H, Guex GD, Plötner J, Uzzell T. Gametogenesis of intergroup hybrids of hemiclonal frogs Genetical Research. 89: 39-45. PMID 17517158 DOI: 10.1017/S0016672307008610 |
0.329 |
|
2007 |
Marracci S, Casola C, Bucci S, Ragghianti M, Ogielska M, Mancino G. Differential expression of two vasa/PL10-related genes during gametogenesis in the special model system Rana. Development Genes and Evolution. 217: 395-402. PMID 17333258 DOI: 10.1007/s00427-007-0143-6 |
0.375 |
|
2007 |
Bai Y, Casola C, Feschotte C, Betrán E. Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila. Genome Biology. 8: R11. PMID 17233920 DOI: 10.1186/Gb-2007-8-1-R11 |
0.688 |
|
2004 |
Casola C, Marracci S, Bucci S, Ragghianti M, Mancino G, Hotz H, Uzzell T, Guex GD. A hAT-related family of interspersed repetitive elements in genomes of western Palaearctic water frogs Journal of Zoological Systematics and Evolutionary Research. 42: 234-244. DOI: 10.1111/J.1439-0469.2004.00254.X |
0.43 |
|
2004 |
Ragghianti M, Bucci S, Casola C, Marracci S, Mancino G. Molecular investigations in western palearctic water frogs Italian Journal of Zoology. 71: 17-23. DOI: 10.1080/11250000409356601 |
0.311 |
|
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