Bing Zhang - Publications

North Carolina State University, Raleigh, NC 
Condensed matter physics, polymer, computation

331 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Cao L, Huang C, Cui Zhou D, Hu Y, Lih TM, Savage SR, Krug K, Clark DJ, Schnaubelt M, Chen L, da Veiga Leprevost F, Eguez RV, Yang W, Pan J, Wen B, ... ... Zhang B, et al. Proteogenomic characterization of pancreatic ductal adenocarcinoma. Cell. 184: 5031-5052.e26. PMID 34534465 DOI: 10.1016/j.cell.2021.08.023  1
2021 Liang X, Wu S, Geng Z, Liu L, Zhang S, Wang S, Zhang Y, Huang Y, Zhang B. LARP7 Suppresses Endothelial-to-Mesenchymal Transition by Coupling with TRIM28. Circulation Research. PMID 34503347 DOI: 10.1161/CIRCRESAHA.121.319590  1
2021 Xu W, Chen Y, Zhang B, Xu W, Niu J, Liu Y. Supramolecular Assembly of β-Cyclodextrin-Modified Polymer by Electrospinning with Sustained Antibacterial Activity. Biomacromolecules. PMID 34495641 DOI: 10.1021/acs.biomac.1c01007  1
2021 Wu Z, Huang S, Li T, Li N, Han D, Zhang B, Xu ZZ, Zhang S, Pang J, Wang S, Zhang G, Zhao J, Wang J. Gut microbiota from green tea polyphenol-dosed mice improves intestinal epithelial homeostasis and ameliorates experimental colitis. Microbiome. 9: 184. PMID 34493333 DOI: 10.1186/s40168-021-01115-9  1
2021 Zhang B, Wang X, Yang Y, Hu B, Tong L, Zhao L, Lu Q. Novel design strategies for perovskite materials with improved stability and suitable band gaps. Physical Chemistry Chemical Physics : Pccp. PMID 34486002 DOI: 10.1039/d1cp01397a  1
2021 Yao Z, Zhang B, Huang J, Shi L, Cheng B. Publisher Correction: Radiation-induced acute injury of intensity-modulated radiotherapy versus three-dimensional conformal radiotherapy in induction chemotherapy followed by concurrent chemoradiotherapy for locoregionally advanced nasopharyngeal carcinoma: a prospective cohort study. Scientific Reports. 11: 17942. PMID 34480091 DOI: 10.1038/s41598-021-97814-2  1
2021 Zhang C, Wang T, Cui T, Liu S, Zhang B, Li X, Tang J, Wang P, Guo Y, Wang Z. Genome-Wide Phylogenetic Analysis, Expression Pattern, and Transcriptional Regulatory Network of the Pig C/EBP Gene Family. Evolutionary Bioinformatics Online. 17: 11769343211041382. PMID 34471342 DOI: 10.1177/11769343211041382  1
2021 Zhang X, Ouyang Y, Huang F, Zhang J, Su C, Jia X, Du W, Li L, Bai J, Zhang B, Wang Z, Du S, Wang H. Modifiable factors of twenty-year blood pressure trajectories among normotensives and their associations with hypertension: A prospective study. The British Journal of Nutrition. 1-25. PMID 34470677 DOI: 10.1017/S0007114521003378  1
2021 Lin Z, Fang Y, Yan L, Lin Y, Liu M, Zhang B, He Y, Shen Y, Wu D, Zhang L. General versus general anaesthesia combined with caudal block in laparoscopic-assisted Soave pull-through of Hirschsprung disease: a retrospective study. Bmc Anesthesiology. 21: 209. PMID 34461833 DOI: 10.1186/s12871-021-01431-5  1
2021 Zhang J, Wang H, Wang Z, Huang F, Zhang X, Du W, Su C, Ouyang Y, Li L, Bai J, Zhang B, Du S, Ding G. Trajectories of Dietary Patterns and Their Associations with Overweight/Obesity among Chinese Adults: China Health and Nutrition Survey 1991-2018. Nutrients. 13. PMID 34444995 DOI: 10.3390/nu13082835  1
2021 Xiong Y, Luan Y, Zhang B, Zhang S, Wang X. Morphological Study of the Effect of Aerobic Exercise on Organs and Arteries in Spontaneously Hypertensive Rats. Healthcare (Basel, Switzerland). 9. PMID 34442203 DOI: 10.3390/healthcare9081066  1
2021 Douglas RN, Yang H, Zhang B, Chen C, Han F, Cheng J, Birchler JA. De novo centromere formation on chromosome fragments with an inactive centromere in maize (Zea mays). Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. PMID 34406545 DOI: 10.1007/s10577-021-09670-5  1
2021 Yan X, Chen G, Jin Z, Zhang Z, Zhang B, He J, Yin S, Huang J, Fan M, Li Z, Chen F, Zeng Y, Han X, Zhu Y. Anti-SARS-CoV-2 IgG levels in relation to disease severity of COVID-19. Journal of Medical Virology. PMID 34403142 DOI: 10.1002/jmv.27274  1
2021 Zhang H, Li G, Guo X, Zhang K, Zhang B, Guo X, Li Y, Fan J, Wang Z, Ma D, Tang BZ. High-Performance Ultraviolet Organic Light-Emitting Diode Enabled by High-Lying Reverse Intersystem Crossing. Angewandte Chemie (International Ed. in English). PMID 34387938 DOI: 10.1002/anie.202108540  1
2021 Zhang B, Tang H, Chen J, Zhang B, Shen Y, Shi W. New mechanistic insights into the effect of cations on membrane fouling caused by anionic polyacrylamide. Journal of Colloid and Interface Science. 606: 10-21. PMID 34384962 DOI: 10.1016/j.jcis.2021.07.148  1
2021 Li J, Li W, Deng Z, Li H, Yu Y, Zhang B. Comparison of free, conjugated, and insoluble-bound phenolics and their antioxidant activities in oven-drying and freeze-drying bamboo (Phyllostachys edulis) shoot tips. Journal of Food Science. PMID 34383327 DOI: 10.1111/1750-3841.15881  1
2021 Lu Y, Zhang W, Zhang B, Heinemann SH, Hoshi T, Hou S, Zhang G. Bilirubin Oxidation End Products (BOXes) Induce Neuronal Oxidative Stress Involving the Nrf2 Pathway. Oxidative Medicine and Cellular Longevity. 2021: 8869908. PMID 34373769 DOI: 10.1155/2021/8869908  1
2021 Sun L, Guo J, Chen H, Zhang D, Shang L, Zhang B, Zhao Y. Tailoring Materials with Specific Wettability in Biomedical Engineering. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2100126. PMID 34369090 DOI: 10.1002/advs.202100126  1
2021 Satpathy S, Krug K, Jean Beltran PM, Savage SR, Petralia F, Kumar-Sinha C, Dou Y, Reva B, Kane MH, Avanessian SC, Vasaikar SV, Krek A, Lei JT, Jaehnig EJ, Omelchenko T, ... ... Zhang B, et al. A proteogenomic portrait of lung squamous cell carcinoma. Cell. 184: 4348-4371.e40. PMID 34358469 DOI: 10.1016/j.cell.2021.07.016  1
2021 Chen YS, Lu S, Zhang B, Du T, Li WJ, Lei M, Zhou Y, Zhang Y, Liu P, Sun YQ, Zhao YL, Yang Y, Peng X, Yang YG. Comprehensive analysis of RNA-seq and whole genome sequencing data reveals no evidence for SARS-CoV-2 integrating into host genome. Protein & Cell. PMID 34341964 DOI: 10.1007/s13238-021-00861-8  1
2021 Jiang H, Wang S, Wang L, Wu J, Li T, Li W, Niu R, Gong W, Wang Z, Sun J, Zhang B, Ding G. [Current status of nutrition work in Chinese disease control institutions]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 50: 578-585. PMID 34311828 DOI: 10.19813/j.cnki.weishengyanjiu.2021.04.008  1
2021 Li Z, He P, Long Y, Yuan G, Shen W, Chen Z, Zhang B, Wang Y, Yue D, Seidl C, Zhang X. Drug Repurposing of Pantoprazole and Vitamin C Targeting Tumor Microenvironment Conditions Improves Anticancer Effect in Metastatic Castration-Resistant Prostate Cancer. Frontiers in Oncology. 11: 660320. PMID 34307134 DOI: 10.3389/fonc.2021.660320  1
2021 Fan X, Zhu Y, Wang N, Zhang B, Zhang C, Wang Y. Therapeutic Dose of Hydroxyurea-Induced Synaptic Abnormalities on the Mouse Spermatocyte. Frontiers in Physiology. 12: 666339. PMID 34305635 DOI: 10.3389/fphys.2021.666339  1
2021 Xu C, Zhou G, Wang X, Zhang B, Zhao T, Wu L. Correlation analysis of serum miR-21 and miR-210 with hs-CRP, TNF-α, IL-6, and ICAM-1 in patients with sepsis after burns. Burns : Journal of the International Society For Burn Injuries. PMID 34272079 DOI: 10.1016/j.burns.2021.05.026  1
2021 Ni W, Zhang Z, Zhang B, Zhang W, Cheng H, Miao Y, Chen W, Liu J, Zhu D, Bi Y. Connecting Peripheral to Central Neuropathy: Examination of Nerve Conduction Combined with Olfactory Tests in Patients with Type 2 Diabetes. Diabetes, Metabolic Syndrome and Obesity : Targets and Therapy. 14: 3097-3107. PMID 34267530 DOI: 10.2147/DMSO.S312021  1
2021 Xin X, Mo R, Shao M, Yang W, Li D, Zhang Y, Wang H, Liu B, Tian S, Chen W, Wu J, Zhu B, Zhou K, Du C, Zhang B. A human-computer collaboration for COVID-19 differentiation: combining a radiomics model with deep learning and human auditing. Annals of Palliative Medicine. PMID 34263624 DOI: 10.21037/apm-20-2625  1
2021 Liu C, Li L, Ge M, Gu L, Zhang K, Su Y, Zhang Y, Liu C, Lan M, Yu Y, Wang T, Zhang B, Zhou G, Meng Q. MiR-29ab1 Cluster Resists Muscle Atrophy Through Inhibiting MuRF1. Dna and Cell Biology. PMID 34255539 DOI: 10.1089/dna.2021.0267  1
2021 Slough T, Rubenson D, Levy R, Alpizar Rodriguez F, Bernedo Del Carpio M, Buntaine MT, Christensen D, Cooperman A, Eisenbarth S, Ferraro PJ, Graham L, Hartman AC, Kopas J, McLarty S, Rigterink AS, ... ... Zhang B, et al. Adoption of community monitoring improves common pool resource management across contexts. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34253604 DOI: 10.1073/pnas.2015367118  1
2021 Buntaine MT, Zhang B, Hunnicutt P. Citizen monitoring of waterways decreases pollution in China by supporting government action and oversight. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34253602 DOI: 10.1073/pnas.2015175118  0.01
2021 Chen S, Xu X, Ma Z, Liu J, Zhang B. Organ-Specific Transcriptome Analysis Identifies Candidate Genes Involved in the Stem Specialization of Bermudagrass ( L.). Frontiers in Genetics. 12: 678673. PMID 34249097 DOI: 10.3389/fgene.2021.678673  1
2021 Gao S, Zhang B, Yang D. A new species of Dactylolabis subgenus Dactylolabis Osten Sacken, 1860 from China (Diptera, Limoniidae). Zookeys. 1047: 91-100. PMID 34248367 DOI: 10.3897/zookeys.1047.62033  1
2021 Long J, Qiu Z, Wei J, Li D, Song X, Jin B, Zhang B. Liquid-microjet photoelectron imaging spectrometry for liquid aqueous solutions. The Review of Scientific Instruments. 92: 065108. PMID 34243573 DOI: 10.1063/5.0036471  1
2021 Wang J, Li Z, Ma X, Du L, Jia Z, Cui X, Yu L, Yang J, Xiao L, Zhang B, Fan H, Zhao F. Translocation of vaginal microbiota is involved in impairment and protection of uterine health. Nature Communications. 12: 4191. PMID 34234149 DOI: 10.1038/s41467-021-24516-8  1
2021 Wu QJ, Zhu DD, Wang DD, Zhang BB, Ren A, Zhang ZB. Effects of dietary supplementation with glutamine on the lymphocyte proliferation and intestinal immune gene expression in broiler chickens infected with Salmonella Enteritidis. Research in Veterinary Science. 139: 18-24. PMID 34229107 DOI: 10.1016/j.rvsc.2021.06.018  0.04
2021 Cai X, Liu M, Zhang B, Zhao SJ, Jiang SW. Phytoestrogens for the Management of Endometriosis: Findings and Issues. Pharmaceuticals (Basel, Switzerland). 14. PMID 34198709 DOI: 10.3390/ph14060569  1
2021 Long H, Zhang C, Chen C, Tang J, Zhang B, Wang Y, Pang J, Su W, Li K, Di B, Chen YQ, Shu Y, Du X. Assessment of the global circulation and endemicity of dengue. Transboundary and Emerging Diseases. PMID 34197697 DOI: 10.1111/tbed.14211  1
2021 Wang Y, Niu S, Zhang B, Yang C, Zhou Z. The whole genome analysis for the first human infection with H10N3 influenza virus in China. The Journal of Infection. PMID 34192524 DOI: 10.1016/j.jinf.2021.06.021  1
2021 Gao S, Zhang B, Yang D. Two new species of genus Spilolonchoptera Yang, 1998 from China (Diptera, Lonchopteridae). Zootaxa. 4980: 389394. PMID 34186973 DOI: 10.11646/zootaxa.4980.2.10  1
2021 Zhang B, Bai X, Wang S, Li L, Li X, Fan F, Wang T, Zhang L, Zhang X, Li Y, Liu Y, Chen J, Meng F, Fu Y. Preparation of Superhydrophobic Metal-Organic Framework/Polymer Composites as Stable and Efficient Catalysts. Acs Applied Materials & Interfaces. PMID 34184868 DOI: 10.1021/acsami.1c07188  1
2021 Qiu C, Sun Y, Xu Y, Zhang B, Zhang X, Yu L, Su C. Photoredox Catalysed Simultaneous Olefin Hydrogenation and Alcohol Oxidation over Crystalline Porous Polymeric Carbon Nitride. Chemsuschem. PMID 34180144 DOI: 10.1002/cssc.202101041  1
2021 Zhang B, Zhang J, Ainiwaer Y, He B, Geng Q, Lin L, Li X. Dexmedetomidine Attenuates Myocardial Injury Induced by Renal Ischemia/Reperfusion by Inhibiting the HMGB1-TLR4-MyD88-NF-κB Signaling Pathway. Annals of Clinical and Laboratory Science. 51: 376-384. PMID 34162568  1
2021 Bi X, Lou P, Song Y, Sheng X, Liu R, Deng M, Yang X, Li G, Yuan S, Zhang H, Jiao B, Zhang B, Xue L, Liu Z, Plikus MV, et al. Msi1 promotes breast cancer metastasis by regulating invadopodia-mediated extracellular matrix degradation via the Timp3-Mmp9 pathway. Oncogene. PMID 34155343 DOI: 10.1038/s41388-021-01873-8  1
2021 Liu S, Zhang B, Rowan BG, Jazwinski SM, Abdel-Mageed AB, Steele C, Wang AR, Sartor O, Niu T, Zhang Q. A Novel Controlled PTEN-Knockout Mouse Model for Prostate Cancer Study. Frontiers in Molecular Biosciences. 8: 696537. PMID 34150854 DOI: 10.3389/fmolb.2021.696537  1
2021 Li W, Zhao H, Qing Z, Nedelska Z, Wu S, Lu J, Wu W, Yin Z, Hort J, Xu Y, Zhang B. Disrupted Network Topology Contributed to Spatial Navigation Impairment in Patients With Mild Cognitive Impairment. Frontiers in Aging Neuroscience. 13: 630677. PMID 34149391 DOI: 10.3389/fnagi.2021.630677  1
2021 Sun T, Zhang B, Ru QJ, Chen XM, Lv BD. Tocopheryl quinone improves non-alcoholic steatohepatitis (NASH) associated dysmetabolism of glucose and lipids by upregulating the expression of glucagon-like peptide 1 (GLP-1) restoring the balance of intestinal flora in rats. Pharmaceutical Biology. 59: 723-731. PMID 34139927 DOI: 10.1080/13880209.2021.1916542  0.01
2021 Zhu C, Sun B, Zhang B, Zhou Z. An update of genetics, co-morbidities and management of hyperuricemia. Clinical and Experimental Pharmacology & Physiology. PMID 34133780 DOI: 10.1111/1440-1681.13539  1
2021 Zhang B, Chen X, Lu W, Zhang QM, Bernholc J. Morphology-induced dielectric enhancement in polymer nanocomposites. Nanoscale. 13: 10933-10942. PMID 34132304 DOI: 10.1039/d1nr00165e  1
2021 Szeglin BC, Wu C, Marco MR, Park HS, Zhang Z, Zhang B, Garcia-Aguilar J, Beauchamp RD, Chen XS, Smith JJ. A SMAD4-modulated gene profile predicts disease-free survival in stage II and III colorectal cancer. Cancer Reports (Hoboken, N.J.). e1423. PMID 34114372 DOI: 10.1002/cnr2.1423  1
2021 Liu Z, Meng Y, Miao Y, Yu L, Wei Q, Li Y, Zhang B, Yu Q. Propofol ameliorates renal ischemia/reperfusion injury by enhancing macrophage M2 polarization through PPARγ/STAT3 signaling. Aging. 13. PMID 34111028 DOI: 10.18632/aging.203107  1
2021 Abdulkareem NM, Bhat R, Qin L, Vasaikar S, Gopinathan A, Mitchell T, Shea MJ, Nanda S, Thangavel H, Zhang B, De Angelis C, Schiff R, Trivedi MV. A novel role of ADGRF1 (GPR110) in promoting cellular quiescence and chemoresistance in human epidermal growth factor receptor 2-positive breast cancer. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e21719. PMID 34110646 DOI: 10.1096/fj.202100070R  1
2021 Sun C, Zhang B, Ning D, Zhang Y, Dai T, Wu L, Li T, Liu W, Zhou J, Wen X. Seasonal dynamics of the microbial community in two full-scale wastewater treatment plants: Diversity, composition, phylogenetic group based assembly and co-occurrence pattern. Water Research. 200: 117295. PMID 34091223 DOI: 10.1016/j.watres.2021.117295  1
2021 Zhang R, Fang YF, Wu DM, Lin Y, Zhang B, Liu MK, Bai JX, Chen F. Comparison of the Efficacy of Minimally Invasive and Open Surgery on Children with Neuroblastoma: A Meta-Analysis. Journal of Laparoendoscopic & Advanced Surgical Techniques. Part A. PMID 34076504 DOI: 10.1089/lap.2020.0618  1
2021 Wang S, Zhang B, Wang Z, Jiang H, Wang L, Li W, Hao L, Wang H. [Trend of food intake from Chinese 15 provinces (autonomous regions, municipalities) adults aged 18 to 35 in 1989-2015]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 50: 442-447. PMID 34074378 DOI: 10.19813/j.cnki.weishengyanjiu.2021.03.016  1
2021 Li W, Zhang B, Wang H, Wang Z, Wang L, Wang S, Hao L, Jiang H. [Status and trends in dietary vitamin intakes of adults aged 18 to 35 in 15 provinces (autonomous regions, municipalities) of China during 1989-2015]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 50: 448-453. PMID 34074367 DOI: 10.19813/j.cnki.weishengyanjiu.2021.03.017  1
2021 Song X, Wang H, Su C, Ouyang Y, Lyu Z, Wei N, Li Y, Ma Y, Li Q, Zhang B. [Agreement analysis and result calibration by ordinary least product regression between bioelectrical impedance analysis and dual energy X-ray absorptiometry]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 50: 426-431. PMID 34074365 DOI: 10.19813/j.cnki.weishengyanjiu.2021.03.013  1
2021 Zhang B, Tian X, Li G, Zhao H, Wang X, Yin Y, Yu J, Meng C. Methane Inhalation Protects Against Lung Ischemia-Reperfusion Injury in Rats by Regulating Pulmonary Surfactant the Nrf2 Pathway. Frontiers in Physiology. 12: 615974. PMID 34054564 DOI: 10.3389/fphys.2021.615974  1
2021 Long Y, Qiu J, Zhang B, He P, Shi X, He Q, Chen Z, Shen W, Li Z, Zhang X. Pharmacological Vitamin C Treatment Impedes the Growth of Endogenous Glutamine-Dependent Cancers by Targeting Glutamine Synthetase. Frontiers in Pharmacology. 12: 671902. PMID 34054545 DOI: 10.3389/fphar.2021.671902  1
2021 Hong D, Gao L, Yao J, Yokoya N, Chanussot J, Heiden U, Zhang B. Endmember-Guided Unmixing Network (EGU-Net): A General Deep Learning Framework for Self-Supervised Hyperspectral Unmixing. Ieee Transactions On Neural Networks and Learning Systems. PMID 34048352 DOI: 10.1109/TNNLS.2021.3082289  0.01
2021 Ding L, Moser M, Luo Y, Zhang W, Zhang B. Treatment Planning Optimization in Irreversible Electroporation for Complete Ablation of Variously Sized Cervical Tumors: A Numerical Study. Journal of Biomechanical Engineering. 143. PMID 34043747 DOI: 10.1115/1.4047551  1
2021 Yoo S, Shi Z, Wen B, Kho S, Pan R, Feng H, Chen H, Carlsson A, Edén P, Ma W, Raymer M, Maier EJ, Tezak Z, Johanson E, Hinton D, ... Zhang B, et al. A community effort to identify and correct mislabeled samples in proteogenomic studies. Patterns (New York, N.Y.). 2: 100245. PMID 34036290 DOI: 10.1016/j.patter.2021.100245  1
2021 Zhang B, Zhang X, Wan K, Zhu J, Xu J, Zhang C, Liu T. Dense Hydrogen-Bonding Network Boosts Ionic Conductive Hydrogels with Extremely High Toughness, Rapid Self-Recovery, and Autonomous Adhesion for Human-Motion Detection. Research (Washington, D.C.). 2021: 9761625. PMID 33997787 DOI: 10.34133/2021/9761625  1
2021 Wang Y, Zhao Z, Zhuang J, Wu X, Wang Z, Zhang B, Gao G, Zhang Y, Guo C, Xia Q. Prognostic Value of Autophagy, Microsatellite Instability, and Mutations in Colorectal Cancer. Journal of Cancer. 12: 3515-3528. PMID 33995628 DOI: 10.7150/jca.51430  1
2021 Fang Z, Chen L, Moser M, Zhang WJC, Qin Z, Zhang B. Electroporation-based Therapy for Brain Tumors: A Review. Journal of Biomechanical Engineering. PMID 33991087 DOI: 10.1115/1.4051184  1
2021 Huang F, Wang H, Wang Z, Zhang J, Du W, Jia X, Wang L, Zhang B. Is geriatric depression scale a valid instrument to screen depression in Chinese community-dwelling elderly? Bmc Geriatrics. 21: 310. PMID 33985441 DOI: 10.1186/s12877-021-02266-y  1
2021 Qing Z, Chen F, Lu J, Lv P, Li W, Liang X, Wang M, Wang Z, Zhang X, Zhang B. Causal structural covariance network revealing atrophy progression in Alzheimer's disease continuum. Human Brain Mapping. PMID 33978292 DOI: 10.1002/hbm.25531  1
2021 Luo H, Song B, Xiong G, Zhang B, Zuo Z, Zhou Z, Chang X. Cadmium inhibits neural stem/progenitor cells proliferation via MitoROS-dependent AKT/GSK-3β/β-catenin signaling pathway. Journal of Applied Toxicology : Jat. PMID 33977565 DOI: 10.1002/jat.4179  1
2021 Zhang B, Zhang H, Yu Y, Zhang R, Wu Y, Yue M, Yang C. Effects of Bacillus Coagulans on growth performance, antioxidant capacity, immunity function, and gut health in broilers. Poultry Science. 100: 101168. PMID 33975039 DOI: 10.1016/j.psj.2021.101168  1
2021 Tang Y, Liu M, Zhang B. Can public-private partnerships (PPPs) improve the environmental performance of urban sewage treatment? Journal of Environmental Management. 291: 112660. PMID 33971512 DOI: 10.1016/j.jenvman.2021.112660  1
2021 Feng J, Han T, Zhang Y, Zhang B, Huang D, Wang T, Yang J. Molecular characterization and biological function of CXCR1 in Nocardia seriolae-infected largemouth bass (Micropterus salmoides). Tissue & Cell. 72: 101551. PMID 33932879 DOI: 10.1016/j.tice.2021.101551  1
2021 Zhang J, Wang Z, Du W, Huang F, Jiang H, Bai J, Zhang X, Zhang B, Wang H. Twenty-Five-Year Trends in Dietary Patterns among Chinese Adults from 1991 to 2015. Nutrients. 13. PMID 33923855 DOI: 10.3390/nu13041327  1
2021 Ma Z, Pi J, Zhang Y, Qin H, Zhang B, Li N, Li Z, Liu Z. Enhanced Anticancer Efficacy of Dual Drug-Loaded Self-Assembled Nanostructured Lipid Carriers Mediated by pH-Responsive Folic Acid and Human-Derived Cell Penetrating Peptide dNP2. Pharmaceutics. 13. PMID 33921919 DOI: 10.3390/pharmaceutics13050600  1
2021 Huang Q, Jia X, Zhang J, Huang F, Wang H, Zhang B, Wang L, Jiang H, Wang Z. Diet-Cognition Associations Differ in Mild Cognitive Impairment Subtypes. Nutrients. 13. PMID 33920687 DOI: 10.3390/nu13041341  1
2021 Yu Z, Liu W, He Y, Sun M, Yu J, Jiao X, Han Q, Tang H, Zhang B, Xian Y, Qi J, Gong J, Xin W, Shi G, Shan F, et al. HLA-A2.1-restricted ECM1-derived epitope LA through DC cross-activation priming CD8 T and NK cells: a novel therapeutic tumour vaccine. Journal of Hematology & Oncology. 14: 71. PMID 33910591 DOI: 10.1186/s13045-021-01081-7  1
2021 Ma Z, Chen S, Wang Z, Liu J, Zhang B. Proteome analysis of bermudagrass stolons and rhizomes provides new insights into the adaptation of plant stems to aboveground and underground growth. Journal of Proteomics. 104245. PMID 33901681 DOI: 10.1016/j.jprot.2021.104245  1
2021 Lei Y, Zhang B, Zhang Y, Dai X, Duan Y, Mao Q, Gao J, Yang Y, Bao Z, Fu X, Ping K, Yan C, Mou Y, Wang S. Design, synthesis and biological evaluation of novel FXIa inhibitors with 2-phenyl-1H-imidazole-5-carboxamide moiety as P1 fragment. European Journal of Medicinal Chemistry. 220: 113437. PMID 33894565 DOI: 10.1016/j.ejmech.2021.113437  1
2021 Ho CC, Tung JK, Zehnder JL, Zhang BM. Validation of a Next-Generation Sequencing-based T-Cell Receptor Gamma Gene Rearrangement Diagnostic Assay: Transitioning from Capillary Electrophoresis to Next-Generation Sequencing. The Journal of Molecular Diagnostics : Jmd. PMID 33892183 DOI: 10.1016/j.jmoldx.2021.03.008  0.01
2021 Fan Y, Jiang H, Wei Y, Zhang B, Ge J. A Case of Giant Right Atrium Diverticulum with Atrial Septal Defect. The Heart Surgery Forum. 24: E369-E371. PMID 33891537 DOI: 10.1532/hsf.3645  1
2021 Shi Z, Wen B, Gao Q, Zhang B. Feature Selection Methods for Protein Biomarker Discovery from Proteomics or Multi-omics Data. Molecular & Cellular Proteomics : McP. 100083. PMID 33887487 DOI: 10.1016/j.mcpro.2021.100083  1
2021 Wang T, Yang F, Wang Z, Zhang B, Wang W, Liu F. Modularization of grid cells constrained by the pyramidal patch lattice. Iscience. 24: 102301. PMID 33870125 DOI: 10.1016/j.isci.2021.102301  1
2021 Li X, Wang Z, Chen Q, Wang X, Qing Z, Zhang W, Lu J, Wang J, Zhang X, Liu J, Wang Z, Li B, Zhang B. Atrophy in the Left Amygdala Predicted Drug Responses in Idiopathic Generalized Epilepsy Patients With Tonic-Clonic Seizures. Frontiers in Neuroscience. 15: 640016. PMID 33867922 DOI: 10.3389/fnins.2021.640016  1
2021 Chen C, Kong W, Liang J, Lu J, Chen D, Sun Y, Zhang X, Qing Z, Feng X, Sun L, Zhang B. Impaired olfactory neural circuit in patients with SLE at early stages. Lupus. 9612033211005556. PMID 33858264 DOI: 10.1177/09612033211005556  1
2021 Zhang B, Gao S, Yang D. The mitochondrial genome of () (Diptera: Limoniidae). Mitochondrial Dna. Part B, Resources. 6: 1321-1323. PMID 33855189 DOI: 10.1080/23802359.2021.1907808  1
2021 Wu B, Zhou JH, Wang WX, Yang HL, Xia M, Zhang BH, She ZG, Li HL. Association Analysis of Hyperlipidemia with the 28-Day All-Cause Mortality of COVID-19 in Hospitalized Patients. Chinese Medical Sciences Journal = Chung-Kuo I Hsueh K'O Hsueh Tsa Chih. 36: 17-26. PMID 33853705 DOI: 10.24920/003866  0.01
2021 Zhang B, Liu F, Fang Z, Ding L, Moser MAJ, Zhang W. An study of a custom-made high-frequency irreversible electroporation generator on different tissues for clinically relevant ablation zones. International Journal of Hyperthermia : the Official Journal of European Society For Hyperthermic Oncology, North American Hyperthermia Group. 38: 593-603. PMID 33853496 DOI: 10.1080/02656736.2021.1912417  1
2021 Shang J, Liu F, Zhang B, Dong K, Lu M, Jiang R, Xu Y, Diao L, Zhao J, Tang H. Liraglutide-induced structural modulation of the gut microbiota in patients with type 2 diabetes mellitus. Peerj. 9: e11128. PMID 33850659 DOI: 10.7717/peerj.11128  1
2021 He K, Lian C, Zhang B, Zhang X, Cao X, Nie D, Gao Y, Zhang J, Shen D. HF-UNet: Learning Hierarchically Inter-Task Relevance in Multi-Task U-Net for Accurate Prostate Segmentation in CT images. Ieee Transactions On Medical Imaging. PMID 33848243 DOI: 10.1109/TMI.2021.3072956  1
2021 Sun M, Zhao J, Mao Q, Yan C, Zhang B, Yang Y, Dai X, Gao J, Lin F, Duan Y, Zhang T, Wang S. Synthesis and biological evaluation of 2-(4-alkoxy-3-cyano)phenylpyrimidine derivatives with 4-amino or 4-hydroxy as a pharmacophore element binding with xanthine oxidase active site. Bioorganic & Medicinal Chemistry. 38: 116117. PMID 33838610 DOI: 10.1016/j.bmc.2021.116117  1
2021 Yao Z, Zhang B, Huang J, Shi L, Cheng B. Radiation-induced acute injury of intensity-modulated radiotherapy versus three-dimensional conformal radiotherapy in induction chemotherapy followed by concurrent chemoradiotherapy for locoregionally advanced nasopharyngeal carcinoma: a prospective cohort study. Scientific Reports. 11: 7693. PMID 33833301 DOI: 10.1038/s41598-021-87170-6  0.01
2021 He K, Lian C, Adeli E, Huo J, Gao Y, Zhang B, Zhang J, Shen D. MetricUNet: Synergistic image- and voxel-level learning for precise prostate segmentation via online sampling. Medical Image Analysis. 71: 102039. PMID 33831595 DOI: 10.1016/  1
2021 Zhang B, Hou P, Xu HT, Zhao YH, Bai JJ, Liu XL. The Spatiotemporal Evolution Analysis of Ecosystem Pattern in Wenchuan (Magnitude 8.0) Earthquake Disaster Area, China. International Journal of Environmental Research and Public Health. 18. PMID 33802442 DOI: 10.3390/ijerph18052490  0.01
2021 Xiong Y, Peng Q, Cao C, Xu Z, Zhang B. Effect of Different Exercise Methods on Non-Alcoholic Fatty Liver Disease: A Meta-Analysis and Meta-Regression. International Journal of Environmental Research and Public Health. 18. PMID 33801028 DOI: 10.3390/ijerph18063242  1
2021 Zhang T, Shang H, Zhang B, Yan D, Xiang X. Ag/Ultrathin-Layered Double Hydroxide Nanosheets Induced by a Self-Redox Strategy for Highly Selective CO Reduction. Acs Applied Materials & Interfaces. PMID 33793186 DOI: 10.1021/acsami.1c02737  0.01
2021 Ding X, Huang H, Zhong L, Chen M, Peng F, Zhang B, Cui X, Yang XA. Disseminated Infection in a Non-HIV Infant With a Homozygous Private Variant of . Frontiers in Cellular and Infection Microbiology. 11: 605589. PMID 33791233 DOI: 10.3389/fcimb.2021.605589  1
2021 Choi S, Zhang B, Ma S, Gonzalez-Celeiro M, Stein D, Jin X, Kim ST, Kang YL, Besnard A, Rezza A, Grisanti L, Buenrostro JD, Rendl M, Nahrendorf M, Sahay A, et al. Corticosterone inhibits GAS6 to govern hair follicle stem-cell quiescence. Nature. PMID 33790465 DOI: 10.1038/s41586-021-03417-2  1
2021 Liu C, Huang S, Wu Z, Li T, Li N, Zhang B, Han D, Wang S, Zhao J, Wang J. Cohousing-mediated microbiota transfer from milk bioactive components-dosed mice ameliorate colitis by remodeling colonic mucus barrier and lamina propria macrophages. Gut Microbes. 13: 1-23. PMID 33789528 DOI: 10.1080/19490976.2021.1903826  1
2021 Zhang B, Li Y, Hu K, Li P, Gu Z, Xiao N, Yang D. A new species of (Anura, Ranidae) from Hunan Province, China. Zookeys. 1024: 91-115. PMID 33776522 DOI: 10.3897/zookeys.1024.56399  1
2021 Huang H, Zhang L, Moser MAJ, Zhang W, Zhang B. A review of antenna designs for percutaneous microwave ablation. Physica Medica : Pm : An International Journal Devoted to the Applications of Physics to Medicine and Biology : Official Journal of the Italian Association of Biomedical Physics (Aifb). PMID 33773908 DOI: 10.1016/j.ejmp.2021.03.010  1
2021 Chang P, Zhang B, Lin L, Chen R, Chen S, Zhao Y, Qu J. Comparison of the myopic progression before, during and after COVID-19 lockdown. Ophthalmology. PMID 33771516 DOI: 10.1016/j.ophtha.2021.03.029  1
2021 Xie X, Zhang B, Wang Q, Zhao X, Wu D, Wu H, Sun X, Hou C, Yang X, Yu R, Zhang S, Murugadoss V, Du W. Efficient microwave absorber and supercapacitors derived from puffed-rice-based biomass carbon: Effects of activating temperature. Journal of Colloid and Interface Science. 594: 290-303. PMID 33770565 DOI: 10.1016/j.jcis.2021.03.025  1
2021 Lei JT, Zhang B. Proteogenomics drives therapeutic hypothesis generation for precision oncology. British Journal of Cancer. PMID 33767418 DOI: 10.1038/s41416-021-01346-5  1
2021 Lv W, Wang Y, Zhou C, Yuan M, Pang M, Fang X, Zhang Q, Huang C, Li X, Zhou Z, Yu Y, Wang Y, Lu M, Xu Q, Li X, ... Zhang B, et al. Development and validation of a clinically applicable deep learning strategy (HONORS) for pulmonary nodule classification at CT: A retrospective multicentre study. Lung Cancer (Amsterdam, Netherlands). 155: 78-86. PMID 33761380 DOI: 10.1016/j.lungcan.2021.03.008  1
2021 Zhang W, Gao C, Qing Z, Zhang Z, Bi Y, Zeng W, Zhang B. Hippocampal subfields atrophy contribute more to cognitive impairment in middle-aged patients with type 2 diabetes rather than microvascular lesions. Acta Diabetologica. PMID 33751221 DOI: 10.1007/s00592-020-01670-x  1
2021 Zhang W, Ge F, Lian C, Xia R, Zhang B. A Single-Center Observational Clinical Study on Factors Associated with Regional Cerebral Oxygen Saturation in Full-Term Newborn Infants During Birth Transition. Medical Science Monitor : International Medical Journal of Experimental and Clinical Research. 27: e928750. PMID 33746201 DOI: 10.12659/MSM.928750  1
2021 He MX, Zhang B, Xia WX, Cui X, Wang ZL. [Hydrochemical Characteristics and Analysis of the Qilihai Wetland, Tianjin]. Huan Jing Ke Xue= Huanjing Kexue. 42: 776-785. PMID 33742872 DOI: 10.13227/j.hjkx.202005228  1
2021 Zhang M, Yu W, Zhou S, Zhang B, Lo ECM, Xu X, Zhang D. Antibacterial Activity of an FDA-Approved H-ATPase Inhibitor, Bedaquiline, Against in Acidic Milieus. Frontiers in Microbiology. 12: 647611. PMID 33717046 DOI: 10.3389/fmicb.2021.647611  1
2021 Zhang L, Wang X, Zhang H, Feng M, Ding J, Zhang B, Cheng Z, Qian L. Exercise-induced peptide EIP-22 protect myocardial from ischaemia/reperfusion injury via activating JAK2/STAT3 signalling pathway. Journal of Cellular and Molecular Medicine. PMID 33710777 DOI: 10.1111/jcmm.16441  1
2021 Sun W, Zhang B, Deng J, Chen L, Ullah A, Yang X. Genome-wide analysis of and family genes in cotton: conserved structures with divergent interactions and expression. Physiology and Molecular Biology of Plants : An International Journal of Functional Plant Biology. 27: 359-368. PMID 33707874 DOI: 10.1007/s12298-021-00943-1  1
2021 Wang M, Yang Y, Wang Y, Li M, Zhang J, Zhang B. Correction to: Vessel-selective 4D MRA based on ASL might potentially show better performance than 3D TOF MRA for treatment evaluation in patients with intra-extracranial bypass surgery: a prospective study. European Radiology. PMID 33693998 DOI: 10.1007/s00330-021-07767-3  1
2021 Yuan Y, Deng Z, Zhang B, Li G, Zhang J, Liu R, Li H. Quality evaluation and geographical classification of immature rape and acacia honeys in China. Journal of the Science of Food and Agriculture. PMID 33682130 DOI: 10.1002/jsfa.11193  1
2021 Zhu P, Liu C, Li B, Zhao C, Zhou T, Xue X, Zhang B. Mangiferin attenuates IL1βinduced chondrocytes apoptosis. Zhong Nan Da Xue Xue Bao. Yi Xue Ban = Journal of Central South University. Medical Sciences. 46: 25-31. PMID 33678633 DOI: 10.11817/j.issn.1672-7347.2021.190287  1
2021 He P, Zhang B, Zou Y, Zhang Y, Zha Z, Long Y, Qiu J, Shen W, Lin X, Li Z, Zhang X. Ascorbic acid analogue 6-Deoxy-6-[F] fluoro-L-ascorbic acid as a tracer for identifying human colorectal cancer with SVCT2 overexpression. Translational Oncology. 14: 101055. PMID 33677235 DOI: 10.1016/j.tranon.2021.101055  1
2021 Song X, Wang H, Su C, Wang Z, Huang F, Zhang J, Du W, Jia X, Jiang H, Ouyang Y, Wang Y, Li L, Ding G, Zhang B. Association of Time-of-Day Energy Intake Patterns with Nutrient Intakes, Diet Quality, and Insulin Resistance. Nutrients. 13. PMID 33668801 DOI: 10.3390/nu13030725  1
2021 Wu YW, Zhou XY, Mi TG, Hu Z, Xu MX, Zhang B, Zhao L, Lu Q. First-principles insights into the adsorption and interaction mechanism of selenium on selective catalytic reduction catalyst. Chemosphere. 275: 130057. PMID 33667766 DOI: 10.1016/j.chemosphere.2021.130057  0.01
2021 Lou P, Bi X, Tian Y, Li G, Kang Q, Lv C, Song Y, Xu J, Sheng X, Yang X, Liu R, Meng Q, Ren F, Plikus MV, Liang B, Zhang B, et al. MiR-22 modulates brown adipocyte thermogenesis by synergistically activating the glycolytic and mTORC1 signaling pathways. Theranostics. 11: 3607-3623. PMID 33664851 DOI: 10.7150/thno.50900  1
2021 Liu X, Du L, Zhang B, Zhao Z, Gao W, Liu B, Liu J, Chen Y, Wang Y, Yu H, Ma G. Alterations and Associations Between Magnetic Susceptibility of the Basal Ganglia and Diffusion Properties in Alzheimer's Disease. Frontiers in Neuroscience. 15: 616163. PMID 33664645 DOI: 10.3389/fnins.2021.616163  1
2021 Li X, Zheng J, Ma X, Zhang B, Zhang J, Wang W, Sun C, Wang Y, Zheng J, Chen H, Tao J, Wang H, Zhang F, Wang J, Zhang H. The oral microbiome of pregnant women facilitates gestational diabetes discrimination. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 33663937 DOI: 10.1016/j.jgg.2020.11.006  1
2021 Yu H, Zhang F, Yan P, Zhang S, Lou Y, Geng Z, Li Z, Zhang Y, Xu Y, Lu Y, Chen C, Wang D, Zhu W, Hu X, Wang J, ... Zhang B, et al. LARP7 Protects Against Heart Failure by Enhancing Mitochondrial Biogenesis. Circulation. PMID 33663221 DOI: 10.1161/CIRCULATIONAHA.120.050812  1
2021 Fang K, Dong Z, Chen X, Zhu J, Zhang B, You J, Xiao Y, Xia W. Using machine learning to identify clotted specimens in coagulation testing. Clinical Chemistry and Laboratory Medicine. PMID 33660491 DOI: 10.1515/cclm-2021-0081  1
2021 Ma XK, Zhang W, Liu Z, Zhang H, Zhang B, Liu Y. Supramolecular Pins with Ultralong Efficient Phosphorescence. Advanced Materials (Deerfield Beach, Fla.). e2007476. PMID 33660350 DOI: 10.1002/adma.202007476  1
2021 Chen Q, Wu S, Li X, Sun Y, Chen W, Lu J, Zhang W, Liu J, Qing Z, Nedelska Z, Hort J, Zhang X, Zhang B. Basal Forebrain Atrophy Is Associated With Allocentric Navigation Deficits in Subjective Cognitive Decline. Frontiers in Aging Neuroscience. 13: 596025. PMID 33658916 DOI: 10.3389/fnagi.2021.596025  1
2021 Zhang B, Yang JW, Han T, Huang DX, Zhao ZH, Feng JQ, Zhou NM, Xie HQ, Wang TM. Identification and characterization of a novel 5-hydroxytryptamine receptor in the sea cucumber Apostichopus japonicus (Selenka). Journal of Experimental Zoology. Part a, Ecological and Integrative Physiology. PMID 33651924 DOI: 10.1002/jez.2450  1
2021 Wang Y, Qu Z, Ma L, Wei X, Zhang N, Zhang B, Xia C. The Crystal Structure of the MHC Class I (MHC-I) Molecule in the Green Anole Lizard Demonstrates the Unique MHC-I System in Reptiles. Journal of Immunology (Baltimore, Md. : 1950). PMID 33637616 DOI: 10.4049/jimmunol.2000992  1
2021 Chen Q, Lu J, Zhang X, Sun Y, Chen W, Li X, Zhang W, Qing Z, Zhang B. Alterations in Dynamic Functional Connectivity in Individuals With Subjective Cognitive Decline. Frontiers in Aging Neuroscience. 13: 646017. PMID 33613274 DOI: 10.3389/fnagi.2021.646017  1
2021 Chen X, Li H, Zhang B, Deng Z. The synergistic and antagonistic antioxidant interactions of dietary phytochemical combinations. Critical Reviews in Food Science and Nutrition. 1-20. PMID 33612011 DOI: 10.1080/10408398.2021.1888693  1
2021 Zhang B, Yu Q, Liu Y. Polarization of Stem Cells Directed by Magnetic Field-Manipulated Supramolecular Polymeric Nanofibers. Acs Applied Materials & Interfaces. PMID 33599493 DOI: 10.1021/acsami.0c19428  1
2021 Rachmin I, Lee JH, Zhang B, Sefton J, Jung I, Lee YI, Hsu YC, Fisher DE. Stress-associated ectopic differentiation of melanocyte stem cells and ORS amelanotic melanocytes in an ex vivo human hair follicle model. Experimental Dermatology. PMID 33598985 DOI: 10.1111/exd.14309  0.01
2021 Li X, Chen W, Yu Q, Zhang Q, Zhang T, Huang X, Li H, He A, Yu H, Jing W, Du H, Ke X, Zhang B, Tian Q, Liu R, et al. A circuit of mossy cells controls the efficacy of memory retrieval by Gria2I inhibition of Gria2. Cell Reports. 34: 108741. PMID 33596426 DOI: 10.1016/j.celrep.2021.108741  1
2021 Fang Z, Mao H, Moser MAJ, Zhang W, Qian Z, Zhang B. Irreversible Electroporation Enhanced by Radiofrequency Ablation: An In Vitro and Computational Study in a 3D Liver Tumor Model. Annals of Biomedical Engineering. PMID 33594637 DOI: 10.1007/s10439-021-02734-x  1
2021 Chen Q, Qing Z, Jin J, Sun Y, Chen W, Lu J, Lv P, Liu J, Li X, Wang J, Zhang W, Wu S, Yan X, Nedelska Z, Hort J, ... Zhang B, et al. Ego- and allo-network disconnection underlying spatial disorientation in subjective cognitive decline. Cortex; a Journal Devoted to the Study of the Nervous System and Behavior. 137: 35-48. PMID 33588131 DOI: 10.1016/j.cortex.2020.12.022  1
2021 Li T, Chen Y, Hu W, Yuan W, Zhao Q, Yao Y, Zhang B, Qiu C, Li CM. Ionic liquid functionalized carbon nanotubes as metal-free catalyst for efficient electrocatalytic hydrogen evolution reaction. Nanoscale. PMID 33586716 DOI: 10.1039/d0nr08817j  1
2021 Tian Y, Jiang C, Pan Y, Guo Z, Wang W, Luo X, Cao Z, Zhang B, Yang J, Shi Y, Zhou N, He X. Bombyx neuropeptide G protein-coupled receptor A14 and A15 are two functional G protein-coupled receptors for CCHamide neuropeptides. Insect Biochemistry and Molecular Biology. 103553. PMID 33582278 DOI: 10.1016/j.ibmb.2021.103553  1
2021 Wang LB, Karpova A, Gritsenko MA, Kyle JE, Cao S, Li Y, Rykunov D, Colaprico A, Rothstein JH, Hong R, Stathias V, Cornwell M, Petralia F, Wu Y, Reva B, ... Zhang B, et al. Proteogenomic and metabolomic characterization of human glioblastoma. Cancer Cell. PMID 33577785 DOI: 10.1016/j.ccell.2021.01.006  1
2021 Zeng SZ, Xie LY, Yu T, Zhong LL, Li JS, Duan ZJ, Zhang B, Zeng QY. Persistent viral shedding of human adenovirus type 7 in children with severe pneumonia. Journal of Medical Virology. PMID 33565614 DOI: 10.1002/jmv.26864  1
2021 Wang Y, Gu Z, Deng X, Zhang B. Ultraviolet-light-triggered isomerization of Rydberg-excited propanal: Real-time capture of ultrafast structural evolution and dynamics investigation. The Journal of Chemical Physics. 154: 054301. PMID 33557549 DOI: 10.1063/5.0039802  1
2021 Guo Y, Shi W, Zhang B, Li W, Lens PNL. Effect of voltage intensity on the nutrient removal performance and microbial community in the iron electrolysis-integrated aerobic granular sludge system. Environmental Pollution (Barking, Essex : 1987). 274: 116604. PMID 33548671 DOI: 10.1016/j.envpol.2021.116604  1
2021 Zhang W, Wang L, Zhang X, Zhang Q, Liang B, Zhang B. Manual passive rehabilitation program for geriatric distal radius fractures. Medicine. 100: e24074. PMID 33546010 DOI: 10.1097/MD.0000000000024074  1
2021 Zhang B, Hu X, Jia Y, Li J, Zhao Z. Polyaniline@Au organic-inorganic nanohybrids with thermometer readout for photothermal immunoassay of tumor marker. Mikrochimica Acta. 188: 63. PMID 33537897 DOI: 10.1007/s00604-021-04719-y  1
2021 Zhang C, Lu Y, Ai Y, Xu X, Zhu S, Zhang B, Tang M, Zhang L, He T. Glabridin liposome ameliorating UVB-induced erythema and lethery skin by suppressing inflammatory cytokine production. Journal of Microbiology and Biotechnology. PMID 33526759 DOI: 10.4014/jmb.2011.11006  1
2021 Zhang B, Chen G, Zhang H, Lan J, Yang C. Effects of rhamnolipids on growth performance and intestinal health parameters in Linnan yellow broilers. Poultry Science. 100: 810-819. PMID 33518135 DOI: 10.1016/j.psj.2020.10.041  1
2021 Su C, Hu D, Wang X, Chen P, Fu Z, Zhang Z, Wang Z, Wang H, Zhang B. [Association between mild cognitive impairment and serum uric acid levels among people aged 55 and above in 4 provinces of China]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 50: 8-14. PMID 33517955 DOI: 10.19813/j.cnki.weishengyanjiu.2021.01.003  1
2021 Ouyang Y, He M, Zhang L, Chen J, Huang F, Cheng Y, Zhang B. [Relationship between physical activity and cognition function among people aged 55 and above in 4 provinces of China]. Wei Sheng Yan Jiu = Journal of Hygiene Research. 50: 2-7. PMID 33517954 DOI: 10.19813/j.cnki.weishengyanjiu.2021.01.002  1
2021 Ross JE, Zhang BM, Lee K, Mohan S, Branchford BR, Bray P, Dugan SN, Freson K, Heller PG, Kahr WHA, Lambert MP, Luchtman-Jones L, Luo M, Perez Botero J, Rondina MT, et al. Specifications of the variant curation guidelines for ITGA2B/ITGB3: ClinGen Platelet Disorder Variant Curation Panel. Blood Advances. 5: 414-431. PMID 33496739 DOI: 10.1182/bloodadvances.2020003712  0.01
2021 Wang S, Li J, Zhang W, Cao C, Zhang F, Shen Q, Zhang X, Zhang B. A dataset of remote-sensed Forel-Ule Index for global inland waters during 2000-2018. Scientific Data. 8: 26. PMID 33495477 DOI: 10.1038/s41597-021-00807-z  1
2021 Zhang YH, Chen AL, Yu RQ, Jia BB, Ye DN, Wang M, Mei YZ, Fang GD, Jiang SY, Zhou Q, Zhang B. miR-296-5p Inhibits the Secretion of Pulmonary Surfactants in Pulmonary Epithelial Cells via the Downregulation of Wnt7b/-Catenin Signaling. Biomed Research International. 2021: 4051504. PMID 33490270 DOI: 10.1155/2021/4051504  1
2021 Zhang JN, Chen J, Yang L, Zhang M, Yao L, Liu YS, Zhao JL, Zhang B, Ying GG. Occurrence and fate of androgens, progestogens and glucocorticoids in two swine farms with integrated wastewater treatment systems. Water Research. 192: 116836. PMID 33486290 DOI: 10.1016/j.watres.2021.116836  1
2021 Zhang B, Ning D, Van Nostrand JD, Sun C, Yang Y, Zhou J, Wen X. The call for regional design code from the regional discrepancy of microbial communities in activated sludge. Environmental Pollution (Barking, Essex : 1987). 273: 116487. PMID 33482461 DOI: 10.1016/j.envpol.2021.116487  1
2021 Hu X, Dong S, Zhang B, Wang X, Yin Y, Liu C, Yu J, Wu X, Xu F, Meng C. Efficacy of silver needle therapy for the treatment of chronic nonspecific low back pain: a prospective, single-center, randomized, parallel-controlled clinical trial. Trials. 22: 75. PMID 33478570 DOI: 10.1186/s13063-021-05040-y  1
2021 Peng L, Zhong LL, Huang Z, Li Y, Zhang B. [Clinical features of children with pneumonia and peripheral lymphocytopenia]. Zhongguo Dang Dai Er Ke Za Zhi = Chinese Journal of Contemporary Pediatrics. 23: 74-77. PMID 33476541 DOI: 10.7499/j.issn.1008-8830.2009012  1
2021 Blaskovich MAT, Kavanagh AM, Elliott AG, Zhang B, Ramu S, Amado M, Lowe GJ, Hinton AO, Pham DMT, Zuegg J, Beare N, Quach D, Sharp MD, Pogliano J, Rogers AP, et al. The antimicrobial potential of cannabidiol. Communications Biology. 4: 7. PMID 33469147 DOI: 10.1038/s42003-020-01530-y  0.01
2021 Yang M, Liu C, Peng Y, Xiao RZ, Zhang S, Zhang ZL, Zhang B, Pang DW. Surface chemistry tuning the selectivity of carbon nanodots towards Hg recognition. Analytica Chimica Acta. 1146: 33-40. PMID 33461717 DOI: 10.1016/j.aca.2020.12.041  1
2021 Huang G, Li X, Zhang B, Ren J. PM2.5 concentration forecasting at surface monitoring sites using GRU neural network based on empirical mode decomposition. The Science of the Total Environment. 768: 144516. PMID 33453525 DOI: 10.1016/j.scitotenv.2020.144516  1
2021 Zhang BM, Keegan A, Li P, Lindeman NI, Nagarajan R, Routbort MJ, Vasalos P, Kim AS, Merker JD. An Overview of Characteristics of Clinical Next-Generation Sequencing-Based Testing for Hematologic Malignancies. Archives of Pathology & Laboratory Medicine. PMID 33450747 DOI: 10.5858/arpa.2019-0661-CP  1
2021 Bowling EA, Wang JH, Gong F, Wu W, Neill NJ, Kim IS, Tyagi S, Orellana M, Kurley SJ, Dominguez-Vidaña R, Chung HC, Hsu TY, Dubrulle J, Saltzman AB, Li H, ... Zhang B, et al. Spliceosome-targeted therapies trigger an antiviral immune response in triple-negative breast cancer. Cell. PMID 33450205 DOI: 10.1016/j.cell.2020.12.031  1
2021 Ma R, Li L, Zhang B. Impact Assessment of Anthropogenic Activities on the Ecological Systems in the Xiongan New Area in the North China Plain. Integrated Environmental Assessment and Management. PMID 33448634 DOI: 10.1002/ieam.4390  0.01
2021 Zhang D, Dong Y, Lv J, Zhang B, Zhang X, Lin Z. Network pharmacology modeling identifies synergistic interaction of therapeutic and toxicological mechanisms for Tripterygium hypoglaucum Hutch. Bmc Complementary Medicine and Therapies. 21: 38. PMID 33446184 DOI: 10.1186/s12906-021-03210-8  1
2020 Shen FF, Chen Y, Dai X, Zhang HY, Zhang B, Liu Y, Liu Y. Purely organic light-harvesting phosphorescence energy transfer by β-cyclodextrin pseudorotaxane for mitochondria targeted imaging. Chemical Science. 12: 1851-1857. PMID 34163949 DOI: 10.1039/d0sc05343k  1
2020 Liu X, Liu S, Luo D, Huang S, Wang F, Zhang B, Chen Y, Zheng L, Lu J, Li S. Involvement of Circulating Exosomal MicroRNAs in Jian-Pi-Yi-Shen Formula Protection Against Adenine-Induced Chronic Kidney Disease. Frontiers in Pharmacology. 11: 622658. PMID 33603670 DOI: 10.3389/fphar.2020.622658  1
2020 Hu J, Qing Z, Liu R, Zhang X, Lv P, Wang M, Wang Y, He K, Gao Y, Zhang B. Deep Learning-Based Classification and Voxel-Based Visualization of Frontotemporal Dementia and Alzheimer's Disease. Frontiers in Neuroscience. 14: 626154. PMID 33551735 DOI: 10.3389/fnins.2020.626154  1
2020 Mody KT, Zhang B, Li X, Fletcher NL, Akhter DT, Jarrett S, Zhang J, Yu C, Thurecht KJ, Mahony TJ, Mitter N. Characterization of the Biodistribution of a Silica Vesicle Nanovaccine Carrying a Protective Antigen With Live Animal Imaging. Frontiers in Bioengineering and Biotechnology. 8: 606652. PMID 33537291 DOI: 10.3389/fbioe.2020.606652  1
2020 Lan J, Chen G, Cao G, Tang J, Li Q, Zhang B, Yang C. Effects of α-glyceryl monolaurate on growth, immune function, volatile fatty acids, and gut microbiota in broiler chickens. Poultry Science. 100875. PMID 33516466 DOI: 10.1016/j.psj.2020.11.052  1
2020 Huang L, Chen X, Sun W, Chen H, Ye Q, Yang D, Li M, Luo C, Ma J, Shao P, Xu H, Zhang B, Zhu X, Xu Y. Early Segmental White Matter Fascicle Microstructural Damage Predicts the Corresponding Cognitive Domain Impairment in Cerebral Small Vessel Disease Patients by Automated Fiber Quantification. Frontiers in Aging Neuroscience. 12: 598242. PMID 33505302 DOI: 10.3389/fnagi.2020.598242  1
2020 Liu Y, Yang T, Zhang B, Williams T, Lin YT, Li L, Zhou Y, Lu W, Kim SH, Chen LQ, Bernholc J, Wang Q. Structural Insight in the Interfacial Effect in Ferroelectric Polymer Nanocomposites. Advanced Materials (Deerfield Beach, Fla.). e2005431. PMID 33150671 DOI: 10.1002/adma.202005431  1
2020 Wen B, Zeng W, Liao Y, Shi Z, Savage SR, Jiang W, Zhang B. Deep learning in proteomics. Proteomics. e1900335. PMID 32939979 DOI: 10.1002/Pmic.201900335  1
2020 Li K, Jain A, Malovannaya A, Wen B, Zhang B. DeepRescore: Leveraging Deep Learning to Improve Peptide Identification in Immunopeptidomics. Proteomics. e1900334. PMID 32864883 DOI: 10.1002/Pmic.201900334  1
2020 Savage SR, Zhang B. Using phosphoproteomics data to understand cellular signaling: a comprehensive guide to bioinformatics resources. Clinical Proteomics. 17: 27. PMID 32676006 DOI: 10.1186/S12014-020-09290-X  1
2020 Gillette MA, Satpathy S, Cao S, Dhanasekaran SM, Vasaikar SV, Krug K, Petralia F, Li Y, Liang WW, Reva B, Krek A, Ji J, Song X, Liu W, Hong R, ... Zhang B, et al. Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma. Cell. 182: 200-225.e35. PMID 32649874 DOI: 10.1016/J.Cell.2020.06.013  1
2020 Liu Y, Zhang B, Xu W, Haibibu A, Han Z, Lu W, Bernholc J, Wang Q. Chirality-induced relaxor properties in ferroelectric polymers. Nature Materials. PMID 32601482 DOI: 10.1038/S41563-020-0724-6  1
2020 O'Reilly KC, Anacker AMJ, Rogers TD, Forsberg CG, Wang J, Zhang B, Blakely RD, Veenstra-VanderWeele J. A social encounter drives gene expression changes linked to neuronal function, brain development, and related disorders in mice expressing the serotonin transporter Ala56 variant. Neuroscience Letters. 135027. PMID 32437898 DOI: 10.1016/J.Neulet.2020.135027  1
2020 Odom GJ, Ban Y, Colaprico A, Liu L, Silva TC, Sun X, Pico AR, Zhang B, Wang L, Chen X. PathwayPCA: an R/Bioconductor Package for Pathway Based Integrative Analysis of Multi-Omics Data. Proteomics. e1900409. PMID 32430990 DOI: 10.1002/Pmic.201900409  1
2020 Wen B, Li K, Zhang Y, Zhang B. Cancer neoantigen prioritization through sensitive and reliable proteogenomics analysis. Nature Communications. 11: 1759. PMID 32273506 DOI: 10.1038/S41467-020-15456-W  1
2020 Zheng ZY, Anurag M, Lei JT, Cao J, Singh P, Peng J, Kennedy H, Nguyen NC, Chen Y, Lavere P, Li J, Du XH, Cakar B, Song W, Kim BJ, ... Zhang B, et al. Neurofibromin Is an Estrogen Receptor-α Transcriptional Co-repressor in Breast Cancer. Cancer Cell. PMID 32142667 DOI: 10.1016/J.Ccell.2020.02.003  1
2020 Dou Y, Kawaler EA, Cui Zhou D, Gritsenko MA, Huang C, Blumenberg L, Karpova A, Petyuk VA, Savage SR, Satpathy S, Liu W, Wu Y, Tsai CF, Wen B, Li Z, ... Zhang B, et al. Proteogenomic Characterization of Endometrial Carcinoma. Cell. PMID 32059776 DOI: 10.1016/J.Cell.2020.01.026  1
2020 Savage SR, Shi Z, Liao Y, Zhang B. Correction: Graph Algorithms for Condensing and Consolidating Gene Set Analysis Results. Molecular & Cellular Proteomics : McP. 19: 431. PMID 32007940 DOI: 10.1074/Mcp.Aac119.001926  1
2020 Satpathy S, Jaehnig EJ, Krug K, Kim BJ, Saltzman AB, Chan DW, Holloway KR, Anurag M, Huang C, Singh P, Gao A, Namai N, Dou Y, Wen B, Vasaikar SV, ... Zhang B, et al. Microscaled proteogenomic methods for precision oncology. Nature Communications. 11: 532. PMID 31988290 DOI: 10.1038/S41467-020-14381-2  1
2020 Kennedy JJ, Chowdhury S, Savage SR, Hou X, Huntoon CJ, Ivey RG, Yu Q, Lin C, Huang D, Zhao L, Voytovich UJ, Schoenherr RM, Shire Z, Skates SJ, Whiteaker JR, ... ... Zhang B, et al. Abstract PR02: Proteogenomic approach to identify mechanisms of platinum refractoriness in high-grade serous ovarian cancers Clinical Cancer Research. 26. DOI: 10.1158/1557-3265.Ovca19-Pr02  1
2020 Petrosyan V, Huang C, Srinivasan RR, Dobrolecki LE, Sallas C, Lewis AN, Wang T, Zhang B, Milosavljevic A, Lewis MT. Abstract P1-03-02: Histoepigenetic characterization of breast cancer patient derived xenografts (PDX) implicates epithelial-stromal interactions in differential chemotherapy resistance and PDX engraftment Cancer Research. DOI: 10.1158/1538-7445.Sabcs19-P1-03-02  1
2020 Satpathy S, Jaehnig E, Karsten K, Kim B, Saltzman A, Chan D, Holloway K, Anurag M, Huang C, Singh P, Gao A, Namai N, Dou Y, Wen B, Vasaikar S, ... ... Zhang B, et al. Abstract GS2-05: Microscaled proteogenomic methods for precision oncology Cancer Research. 80. DOI: 10.1158/1538-7445.Sabcs19-Gs2-05  1
2020 Kawaler EA, Dou Y, Zhou DC, Gritsenko MA, Rodland KD, Ding L, Zhang B, Liu T, Fenyö D. Abstract 6580: Proteogenomic characterization of endometrial carcinoma Cancer Research. 80: 6580-6580. DOI: 10.1158/1538-7445.Am2020-6580  1
2020 Jaehnig EJ, Anurag M, Lei JT, Zhang B. Abstract 5467: Outlier analysis to identify determinants of therapeutic resistance in breast cancer Cancer Research. 80: 5467-5467. DOI: 10.1158/1538-7445.Am2020-5467  1
2020 Lei JT, Jaehnig E, Zhang B. Abstract 4385: Proteogenomics-driven synthetic lethality discovery to predict targetable protein dependencies induced by somatic deletions Cancer Research. 80: 4385-4385. DOI: 10.1158/1538-7445.Am2020-4385  1
2019 Clark DJ, Dhanasekaran SM, Petralia F, Pan J, Song X, Hu Y, da Veiga Leprevost F, Reva B, Lih TM, Chang HY, Ma W, Huang C, Ricketts CJ, Chen L, Krek A, ... Zhang B, et al. Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma. Cell. 179: 964-983.e31. PMID 31675502 DOI: 10.1016/J.Cell.2019.10.007  1
2019 Anurag M, Zhu M, Huang C, Vasaikar S, Wang J, Hoog J, Burugu S, Gao D, Suman V, Zhang XH, Zhang B, Nielsen T, Ellis MJ. Immune Checkpoint Profiles in Luminal B Breast Cancer (Alliance). Journal of the National Cancer Institute. PMID 31665365 DOI: 10.1093/Jnci/Djz213  1
2019 Sato S, Vasaikar S, Eskaros A, Kim Y, Lewis JS, Zhang B, Zijlstra A, Weaver AM. EPHB2 carried on small extracellular vesicles induces tumor angiogenesis via activation of ephrin reverse signaling. Jci Insight. PMID 31661464 DOI: 10.1172/Jci.Insight.132447  1
2019 Thangavel H, Angelis C, Vasaikar S, Bhat R, Jolly MK, Nagi C, Creighton CJ, Chen F, Dobrolecki LE, George JT, Kumar T, Abdulkareem NM, Mao S, Nardone A, Rimawi M, ... Zhang B, et al. A CTC-Cluster-Specific Signature Derived from OMICS Analysis of Patient-Derived Xenograft Tumors Predicts Outcomes in Basal-Like Breast Cancer. Journal of Clinical Medicine. 8. PMID 31652963 DOI: 10.3390/Jcm8111772  1
2019 Gao Q, Zhu H, Dong L, Shi W, Chen R, Song Z, Huang C, Li J, Dong X, Zhou Y, Liu Q, Ma L, Wang X, Zhou J, Liu Y, ... Zhang B, et al. Integrated Proteogenomic Characterization of HBV-Related Hepatocellular Carcinoma. Cell. 179: 561-577.e22. PMID 31585088 DOI: 10.1016/J.Cell.2019.08.052  1
2019 Zhang B, Kuster B. Proteomics Is Not an Island: Multi-omics Integration Is the Key to Understanding Biological Systems. Molecular & Cellular Proteomics : McP. 18: S1-S4. PMID 31399542 DOI: 10.1074/Mcp.E119.001693  0.01
2019 Gómez-Miragaya J, Díaz-Navarro A, Tonda R, Beltran S, Palomero L, Palafox M, Dobrolecki LE, Huang C, Vasaikar S, Zhang B, Wulf GM, Collado-Solé A, Trinidad EM, Muñoz P, Paré L, et al. Chromosome 12p amplification in triple-negative/BRCA1-mutated breast cancer associates with emergence of docetaxel resistance and carboplatin sensitivity. Cancer Research. PMID 31213465 DOI: 10.1158/0008-5472.Can-18-3835  1
2019 Savage SR, Shi Z, Liao Y, Zhang B. Graph algorithms for condensing and consolidating gene set analysis results. Molecular & Cellular Proteomics : McP. PMID 31142576 DOI: 10.1074/Mcp.Tir118.001263  1
2019 Liao Y, Wang J, Jaehnig EJ, Shi Z, Zhang B. WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs. Nucleic Acids Research. PMID 31114916 DOI: 10.1093/Nar/Gkz401  1
2019 Vasaikar S, Huang C, Wang X, Petyuk VA, Savage SR, Wen B, Dou Y, Zhang Y, Shi Z, Arshad OA, Gritsenko MA, Zimmerman LJ, McDermott JE, Clauss TR, Moore RJ, ... Zhang B, et al. Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities. Cell. PMID 31031003 DOI: 10.1016/J.Cell.2019.03.030  1
2019 Liu HL, Zhang B, Gao T, Wu X, Cui F, Xu W. 3D chiral color prints for anti-counterfeiting. Nanoscale. PMID 30860223 DOI: 10.1039/c8nr09975h  1
2019 Hu Q, Li C, Wang S, Li Y, Wen B, Zhang Y, Liang K, Yao J, Ye Y, Hsiao H, Nguyen TK, Park PK, Egranov SD, Hawke DH, Marks JR, ... Zhang B, et al. LncRNAs-directed PTEN enzymatic switch governs epithelial-mesenchymal transition. Cell Research. PMID 30631154 DOI: 10.1038/S41422-018-0134-3  1
2019 Wen B, Wang X, Zhang B. PepQuery enables fast, accurate, and convenient proteomic validation of novel genomic alterations. Genome Research. PMID 30610011 DOI: 10.1101/Gr.235028.118  1
2019 Bhat R, Qin L, Angelis CD, Sahay D, Bhargava D, Creighton C, Yadav P, Yazdanfard S, Alrawi A, Yadav V, Vasaikar S, Nanda S, Sethunath V, Fu X, Zhang B, et al. Abstract P6-20-10: Role of GPR110 in breast cancer Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-P6-20-10  1
2019 Bhat R, Qin L, Angelis CD, Vasaikar S, Thangavel H, AbdulKareem N, Zhang B, Schiff R, Trivedi MV. Abstract 3044: The role of GPR110 in tumorigenicity, tumor cell dissemination, and cell cycle regulation in HER2+ breast cancer Cancer Research. 79: 3044-3044. DOI: 10.1158/1538-7445.Sabcs18-3044  1
2019 Thangavel H, Angelis CD, Vasaikar S, Bhat R, Jolly MK, Dobrolecki LE, George JT, Giuliano M, Lewis M, Levine H, Zhang B, Schiff R, Trivedi MV. Abstract 2783:OMICSanalysis of breast cancer PDX tumors to determine CTC-cluster-specific signature in predicting breast cancer metastasis Cancer Research. DOI: 10.1158/1538-7445.Sabcs18-2783  1
2019 Cho KC, Hruban R, Zhang H, Huang C, Zhang B, Zhou DC, Ding L, Boja E. Abstract A60: Integrated proteogenomic characterization of pancreatic ductal adenocarcinoma Cancer Research. 79. DOI: 10.1158/1538-7445.Panca19-A60  1
2019 Zhang B, Vasaikar S, Huang C, Wang X, Petyuk VA, Savage SR, Wen B, Dou Y, Zhang Y, Shi Z, Arshad OA, Gritsenko MA, Zimmerman LJ, McDermott JE, Clauss TR, et al. Abstract LB-006: Proteogenomic characterization of human colon cancer reveals new therapeutic opportunities Cancer Research. 79. DOI: 10.1158/1538-7445.Am2019-Lb-006  1
2019 Vasaikar S, Straub P, Wang J, Zhang B. Abstract 5112: LinkedOmics: Analyzing multi-omics data within and across 32 cancer types Cancer Research. 79: 5112-5112. DOI: 10.1158/1538-7445.Am2019-5112  1
2019 Liu Y, Zhang B, Haibibu A, Xu W, Han Z, Lu W, Bernholc J, Wang Q. Insights into the Morphotropic Phase Boundary in Ferroelectric Polymers from the Molecular Perspective Journal of Physical Chemistry C. 123: 8727-8730. DOI: 10.1021/Acs.Jpcc.9B01220  1
2018 Shen J, Vasaikar S, Zhang B. DLAD4U: deriving and prioritizing disease lists from PubMed literature. Bmc Bioinformatics. 19: 495. PMID 30591010 DOI: 10.1186/S12859-018-2463-0  1
2018 Zhang B, Whiteaker JR, Hoofnagle AN, Baird GS, Rodland KD, Paulovich AG. Clinical potential of mass spectrometry-based proteogenomics. Nature Reviews. Clinical Oncology. PMID 30487530 DOI: 10.1038/S41571-018-0135-7  1
2018 Hinger SA, Cha DJ, Franklin JL, Higginbotham JN, Dou Y, Ping J, Shu L, Prasad N, Levy S, Zhang B, Liu Q, Weaver AM, Coffey RJ, Patton JG. Diverse Long RNAs Are Differentially Sorted into Extracellular Vesicles Secreted by Colorectal Cancer Cells. Cell Reports. 25: 715-725.e4. PMID 30332650 DOI: 10.1016/J.Celrep.2018.09.054  1
2018 Liu Y, Aziguli H, Zhang B, Xu W, Lu W, Bernholc J, Wang Q. Ferroelectric polymers exhibiting behaviour reminiscent of a morphotropic phase boundary. Nature. 562: 96-100. PMID 30283102 DOI: 10.1038/S41586-018-0550-Z  1
2018 Boja E, Težak Ž, Zhang B, Wang P, Johanson E, Hinton D, Rodriguez H. Right data for right patient-a precisionFDA NCI-CPTAC Multi-omics Mislabeling Challenge. Nature Medicine. 24: 1301-1302. PMID 30194412 DOI: 10.1038/S41591-018-0180-X  1
2018 Li K, Vaudel M, Zhang B, Ren Y, Wen B. PDV: an integrative proteomics data viewer. Bioinformatics (Oxford, England). PMID 30169737 DOI: 10.1093/Bioinformatics/Bty770  1
2018 Nguyen TM, Kabotyanski EB, Dou Y, Reineke LC, Zhang P, Zhang XH, Malovannaya A, Jung SY, Mo Q, Roarty KP, Chen Y, Zhang B, Neilson JR, Lloyd RE, Perou CM, et al. FGFR1-activated Translation of WNT Pathway Components with Structured 5' UTRs is Vulnerable to Inhibition of EIF4A-dependent Translation Initiation. Cancer Research. PMID 29844125 DOI: 10.1158/0008-5472.Can-18-0631  1
2018 Zhang B, Zhang X, Jia Y, Zhang X, Ma M, Liu R, Jing Q. Novel Anisotropic Ductility of a High Strength Annealed Ti-20Zr-6.5Al-4V Alloy. Materials (Basel, Switzerland). 11. PMID 29601500 DOI: 10.3390/ma11040529  1
2018 Nair A, Chung HC, Sun T, Tyagi S, Dobrolecki LE, Dominguez-Vidana R, Kurley SJ, Orellana M, Renwick A, Henke DM, Katsonis P, Schmitt E, Chan DW, Li H, Mao S, ... Zhang B, et al. Combinatorial inhibition of PTPN12-regulated receptors leads to a broadly effective therapeutic strategy in triple-negative breast cancer. Nature Medicine. PMID 29578538 DOI: 10.1038/Nm.4507  1
2018 Aebersold R, Agar JN, Amster IJ, Baker MS, Bertozzi CR, Boja ES, Costello CE, Cravatt BF, Fenselau C, Garcia BA, Ge Y, Gunawardena J, Hendrickson RC, Hergenrother PJ, Huber CG, ... Zhang B, et al. How many human proteoforms are there? Nature Chemical Biology. 14: 206-214. PMID 29443976 DOI: 10.1038/Nchembio.2576  1
2018 Menschaert G, Wang X, Jones AR, Ghali F, Fenyö D, Olexiouk V, Zhang B, Deutsch EW, Ternent T, Vizcaíno JA. The proBAM and proBed standard formats: enabling a seamless integration of genomics and proteomics data. Genome Biology. 19: 12. PMID 29386051 DOI: 10.1186/S13059-017-1377-X  1
2018 Zhou S, Wang X, Liao Y, Xu Y, Zhou K, Dai S, Zhang B. The Influence of Temperature on Phase Transition of Perovskite Materials Using the First-principles Method Destech Transactions On Engineering and Technology Research. DOI: 10.12783/Dtetr/Apop2017/18783  1
2018 Xu Y, Wang X, Liao Y, Zhou S, Tian J, Dai S, Zhang B. Steered Molecular Dynamics Simulation of Light-harvesting Antenna Protein Complex II Destech Transactions On Engineering and Technology Research. DOI: 10.12783/Dtetr/Apop2017/18771  1
2018 Wang X, Xu Y, Liao Y, Zhou S, Zhang B. The Electron Transfer Path Between Cytochrome C and Single-walled Carbon Manotubes Based on Quantum Mechanics Destech Transactions On Engineering and Technology Research. DOI: 10.12783/Dtetr/Apop2017/18769  1
2017 Wang X, Codreanu SG, Wen B, Li K, Chambers M, Liebler DC, Zhang B. Detection of proteome diversity resulted from alternative splicing is limited by trypsin cleavage specificity. Molecular & Cellular Proteomics : McP. PMID 29222161 DOI: 10.1074/Mcp.Ra117.000155  1
2017 Vasaikar SV, Straub P, Wang J, Zhang B. LinkedOmics: analyzing multi-omics data within and across 32 cancer types. Nucleic Acids Research. PMID 29136207 DOI: 10.1093/Nar/Gkx1090  1
2017 McDonough EM, Barrett CW, Parang B, Mittal MK, Smith JJ, Bradley AM, Choksi YA, Coburn LA, Short SP, Thompson JJ, Zhang B, Poindexter SV, Fischer MA, Chen X, Li J, et al. MTG16 is a tumor suppressor in colitis-associated carcinoma. Jci Insight. 2. PMID 28814670 DOI: 10.1172/Jci.Insight.78210  1
2017 Wang J, Mouradov D, Wang X, Jorissen RN, Chambers MC, Zimmerman LJ, Vasaikar S, Love CG, Li S, Lowes K, Leuchowius KJ, Jousset H, Weinstock J, Yau C, Mariadason J, ... Zhang B, et al. Colorectal cancer cell line proteomes are representative of primary tumors and predict drug sensitivity. Gastroenterology. PMID 28625833 DOI: 10.1053/J.Gastro.2017.06.008  1
2017 Beavers WN, Rose KL, Galligan JJ, Mitchener MM, Rouzer CA, Tallman KA, Lamberson CR, Wang X, Hill S, Ivanova PT, Brown HA, Zhang B, Porter NA, Marnett LJ. Protein Modification by Endogenously Generated Lipid Electrophiles: Mitochondria as the Source and Target. Acs Chemical Biology. PMID 28613820 DOI: 10.1021/Acschembio.7B00480  1
2017 Simmler LD, Anacker AMJ, Levin MH, Vaswani NM, Gresch PJ, Nackenoff AG, Anastasio NC, Stutz SJ, Cunningham KA, Wang J, Zhang B, Keith Henry L, Stewart A, Veenstra-VanderWeele J, Blakely RD. Serotonin Transporter Blockade Contributes to the Behavioral, Neuronal, and Molecular Effects of Cocaine. British Journal of Pharmacology. PMID 28585320 DOI: 10.1111/Bph.13899  1
2017 Zhao J, Zhu X, Shrubsole MJ, Ness RM, Hibler EA, Cai Q, Long J, Chen Z, Jiang M, Kabagambe EK, Zhang B, Hou L, Smalley WE, Edwards TL, Giovannucci EL, et al. Interactions between calcium intake and polymorphisms in genes essential for calcium reabsorption and risk of colorectal neoplasia in a two-phase study. Molecular Carcinogenesis. PMID 28544176 DOI: 10.1002/Mc.22678  1
2017 Wang J, Vasaikar S, Shi Z, Greer M, Zhang B. WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit. Nucleic Acids Research. PMID 28472511 DOI: 10.1093/Nar/Gkx356  1
2017 Ruggles KV, Krug K, Wang X, Clauser KR, Wang J, Payne SH, Fenyö D, Zhang B, Mani DR. Methods, tools and current perspectives in proteogenomics. Molecular & Cellular Proteomics : McP. PMID 28456751 DOI: 10.1074/Mcp.Mr117.000024  1
2017 Castellanos J, Liu Q, Beauchamp RD, Zhang B. Predicting colorectal cancer recurrence by utilizing multiple-view multiple-learner supervised learning. Journal of Clinical Oncology. 35: 635-635. DOI: 10.1200/Jco.2017.35.4_Suppl.635  1
2017 Madar IH, Lee W, Wang X, Ko SI, Kim H, Mun DG, Zhang B, Paek E, Lee S. Comprehensive and sensitive proteogenomics data analysis strategy based on complementary multi-stage database search International Journal of Mass Spectrometry. 427: 11-19. DOI: 10.1016/J.Ijms.2017.08.015  1
2016 Zhang M, Wang B, Xu J, Wang X, Xie L, Zhang B, Li Y, Li J. CanProVar 2.0: An Updated Database of Human Cancer Proteome Variation. Journal of Proteome Research. PMID 27977206 DOI: 10.1021/Acs.Jproteome.6B00505  1
2016 Dou Y, Cha DJ, Franklin JL, Higginbotham JN, Jeppesen DK, Weaver AM, Prasad N, Levy S, Coffey RJ, Patton JG, Zhang B. Circular RNAs are down-regulated in KRAS mutant colon cancer cells and can be transferred to exosomes. Scientific Reports. 6: 37982. PMID 27892494 DOI: 10.1038/Srep37982  1
2016 Wang J, Ma Z, Carr SA, Mertins P, Zhang H, Zhang Z, Chan DW, Ellis MJ, Townsend RR, Smith RD, McDermott JE, Chen X, Paulovich AG, Boja ES, Mesri M, ... Zhang B, et al. Proteome profiling outperforms transcriptome profiling for co-expression based gene function prediction. Molecular & Cellular Proteomics : McP. PMID 27836980 DOI: 10.1074/Mcp.M116.060301  1
2016 Zhang H, Liu T, Zhang Z, Payne SH, Zhang B, McDermott JE, Zhou JY, Petyuk VA, Chen L, Ray D, Sun S, Yang F, Chen L, Wang J, Shah P, ... Zhang B, et al. Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer. Cell. PMID 27372738 DOI: 10.1016/J.Cell.2016.05.069  1
2016 Wen B, Xu S, Zhou R, Zhang B, Wang X, Liu X, Xu X, Liu S. PGA: an R/Bioconductor package for identification of novel peptides using a customized database derived from RNA-Seq. Bmc Bioinformatics. 17: 244. PMID 27316337 DOI: 10.1186/S12859-016-1133-3  1
2016 Mertins P, Mani DR, Ruggles KV, Gillette MA, Clauser KR, Wang P, Wang X, Qiao JW, Cao S, Petralia F, Kawaler E, Mundt F, Krug K, Tu Z, Lei JT, ... Zhang B, et al. Proteogenomics connects somatic mutations to signalling in breast cancer. Nature. 534: 55-62. PMID 27251275 DOI: 10.1038/Nature18003  1
2016 Zhang B, Wang H, Zhang S, Song G, Kure-Chu SZ, Wang X, Kuang J, Tang G. Effect of electropulsing-ultrasonic surface treatment on the surface properties and the corrosion behavior of 45 steel Journal of Materials Research. 31: 2114-2124. DOI: 10.1557/jmr.2016.126  1
2016 Mertins P, Mani, Ruggles K, Gillette M, Clauser K, Wang P, Wang X, Qiao J, Cao S, Petralia F, Mundt F, Tu Z, Lei J, Gatza M, Wilkerson M, ... ... Zhang B, et al. Abstract IA29: Proteogenomic and phosphoproteomic analysis of breast cancer Molecular Cancer Research. 14. DOI: 10.1158/1557-3125.Advbc15-Ia29  1
2016 Qin J, Zhang X, Yang C, Song A, Zhang B, Rajendran S, Ma M, Liu R. Effect of Ag+ and PO43- ratios on the microstructure and photocatalytic activity of Ag3PO4 Functional Materials Letters. 9. DOI: 10.1142/S1793604716500636  1
2016 Huang G, Zhang P, Zhang B, Yin T, Ren J. The optimal community detection of software based on complex networks International Journal of Modern Physics C. DOI: 10.1142/S0129183116500856  1
2016 Jia Y, Liu R, Hu W, Wang Z, Zhang B, Liu Y, Ma M. High strength ductile Ti-Fe alloy by carbon micro-alloying Journal of Alloys and Compounds. 688: 376-379. DOI: 10.1016/j.jallcom.2016.07.147  1
2015 Liu Q, Zhang B. Integrative omics analysis reveals post-transcriptionally enhanced protective host response in colorectal cancers with microsatellite instability. Journal of Proteome Research. PMID 26680540 DOI: 10.1021/Acs.Jproteome.5B00847  1
2015 Wang X, Slebos RJ, Chambers MC, Tabb DL, Liebler DC, Zhang B. proBAMsuite, a bioinformatics framework for genome-based representation and analysis of proteomics data. Molecular & Cellular Proteomics : McP. PMID 26657539 DOI: 10.1074/Mcp.M115.052860  1
2015 Qian J, Zou Y, Wang J, Zhang B, Massion PP. Global gene expression profiling reveals a suppressed immune response pathway associated with 3q amplification in squamous carcinoma of the lung. Genomics Data. 5: 272-4. PMID 26484266 DOI: 10.1016/J.Gdata.2015.06.014  1
2015 Abraham PE, Wang X, Ranjan P, Nookaew I, Zhang B, Tuskan GA, Hettich RL. Integrating mRNA and Protein Sequencing Enables the Detection and Quantitative Profiling of Natural Protein Sequence Variants of Populus trichocarpa. Journal of Proteome Research. PMID 26483142 DOI: 10.1021/Acs.Jproteome.5B00823  1
2015 Zhu X, Shrubsole MJ, Ness RM, Hibler EA, Cai Q, Long J, Chen Z, Li G, Jiang M, Hou L, Kabagambe EK, Zhang B, Smalley WE, Edwards TL, Giovannucci EL, et al. Calcium/magnesium intake ratio, but not magnesium intake, interacts with genetic polymorphism in relation to colorectal neoplasia in a two-phase study. Molecular Carcinogenesis. PMID 26333203 DOI: 10.1002/Mc.22387  1
2015 Patton JG, Franklin JL, Weaver AM, Vickers K, Zhang B, Coffey RJ, Ansel KM, Blelloch R, Goga A, Huang B, L'Etoille N, Raffai RL, Lai CP, Krichevsky AM, Mateescu B, et al. Biogenesis, delivery, and function of extracellular RNA. Journal of Extracellular Vesicles. 4: 27494. PMID 26320939 DOI: 10.3402/Jev.V4.27494  1
2015 Hu Z, Scott HS, Qin G, Zheng G, Chu X, Xie L, Adelson DL, Oftedal BE, Venugopal P, Babic M, Hahn CN, Zhang B, Wang X, Li N, Wei C. Revealing Missing Human Protein Isoforms Based on Ab Initio Prediction, RNA-seq and Proteomics. Scientific Reports. 5: 10940. PMID 26156868 DOI: 10.1038/Srep10940  1
2015 Cha DJ, Franklin JL, Dou Y, Liu Q, Higginbotham JN, Demory Beckler M, Weaver AM, Vickers K, Prasad N, Levy S, Zhang B, Coffey RJ, Patton JG. KRAS-dependent sorting of miRNA to exosomes. Elife. 4. PMID 26132860 DOI: 10.7554/Elife.07197  1
2015 Qi Y, Wang X, Rose KL, MacDonald WH, Zhang B, Schey KL, Luther JM. Activation of the Endogenous Renin-Angiotensin-Aldosterone System or Aldosterone Administration Increases Urinary Exosomal Sodium Channel Excretion. Journal of the American Society of Nephrology : Jasn. PMID 26113616 DOI: 10.1681/Asn.2014111137  1
2015 Slebos RJ, Wang X, Wang X, Zhang B, Tabb DL, Liebler DC. Proteomic analysis of colon and rectal carcinoma using standard and customized databases. Scientific Data. 2: 150022. PMID 26110064 DOI: 10.1038/Sdata.2015.22  1
2015 French CL, Ye F, Revetta F, Zhang B, Coffey RJ, Washington MK, Deane NG, Beauchamp RD, Weaver AM. Linking patient outcome to high throughput protein expression data identifies novel regulators of colorectal adenocarcinoma aggressiveness. F1000research. 4: 99. PMID 26097693 DOI: 10.12688/F1000Research.6388.1  1
2015 Sun H, Chen C, Lian B, Zhang M, Wang X, Zhang B, Li Y, Yang P, Xie L. Identification of HPV integration and gene mutation in HeLa cell line by integrated analysis of RNA-Seq and MS/MS data. Journal of Proteome Research. 14: 1678-86. PMID 25698088 DOI: 10.1021/Pr500944C  1
2015 Zhu J, Shi Z, Wang J, Zhang B. Empowering biologists with multi-omics data: colorectal cancer as a paradigm. Bioinformatics (Oxford, England). 31: 1436-43. PMID 25527095 DOI: 10.1093/Bioinformatics/Btu834  1
2015 Cha DJ, Franklin JL, Dou Y, Liu Q, Higginbotham JN, Beckler MD, Weaver AM, Vickers K, Prasad N, Levy S, Zhang B, Coffey RJ, Patton JG. Author response: KRAS-dependent sorting of miRNA to exosomes Elife. DOI: 10.7554/Elife.07197.027  1
2015 Mertins P, Mani, Clauser K, Gillette M, Wang P, Qiao J, Fenyo D, Ruggles K, Davies S, Zhang B, Gatza M, Wang S, Yan P, Lin C, McLellan M, et al. Abstract SY44-02: Proteogenomic and phosphoproteomic analysis of breast cancer Cancer Research. 75. DOI: 10.1158/1538-7445.Am2015-Sy44-02  1
2015 Zhang X, Qin J, Perasinjaroen T, Aeksen W, Das MK, Hao R, Zhang B, Wangyao P, Boonyongmaneerat Y, Limpanart S, Ma M, Liu R. Preparation and hardness of pulse electrodeposited Ni-W-diamond composite coatings Surface and Coatings Technology. 276: 228-232. DOI: 10.1016/j.surfcoat.2015.06.073  1
2014 Tripathi MK, Deane NG, Zhu J, An H, Mima S, Wang X, Padmanabhan S, Shi Z, Prodduturi N, Ciombor KK, Chen X, Washington MK, Zhang B, Beauchamp RD. Nuclear factor of activated T-cell activity is associated with metastatic capacity in colon cancer. Cancer Research. 74: 6947-57. PMID 25320007 DOI: 10.1158/0008-5472.Can-14-1592  1
2014 Wang X, Liu Q, Zhang B. Leveraging the complementary nature of RNA-Seq and shotgun proteomics data. Proteomics. 14: 2676-87. PMID 25266668 DOI: 10.1002/Pmic.201400184  1
2014 Zhu X, Liang J, Shrubsole MJ, Ness RM, Cai Q, Long J, Chen Z, Li G, Wiese D, Zhang B, Smalley WE, Edwards TL, Giovannucci E, Zheng W, Dai Q. Calcium intake and ion transporter genetic polymorphisms interact in human colorectal neoplasia risk in a 2-phase study. The Journal of Nutrition. 144: 1734-41. PMID 25165391 DOI: 10.3945/Jn.114.196709  1
2014 Zhang B, Wang J, Wang X, Zhu J, Liu Q, Shi Z, Chambers MC, Zimmerman LJ, Shaddox KF, Kim S, Davies SR, Wang S, Wang P, Kinsinger CR, Rivers RC, et al. Proteogenomic characterization of human colon and rectal cancer. Nature. 513: 382-7. PMID 25043054 DOI: 10.1038/Nature13438  1
2014 McDermott JE, Huang Y, Zhang B, Xu H, Zhao Z. Integrative genomics and computational systems medicine. Biomed Research International. 2014: 945253. PMID 25025078 DOI: 10.1155/2014/945253  1
2014 Zhao Z, Zhang B, Huang Y, Xu H, McDermott JE. Computational methods for omics data. International Journal of Computational Biology and Drug Design. 7: 97-101. PMID 24878722 DOI: 10.1504/Ijcbdd.2014  1
2014 Wang X, Zhang B. Integrating genomic, transcriptomic, and interactome data to improve Peptide and protein identification in shotgun proteomics. Journal of Proteome Research. 13: 2715-23. PMID 24792918 DOI: 10.1021/Pr500194T  1
2014 Hardaway JA, Wang J, Fleming PA, Fleming KA, Whitaker SM, Nackenoff A, Snarrenberg CL, Hardie SL, Zhang B, Blakely RD. An open-source analytical platform for analysis of C. elegans swimming-induced paralysis. Journal of Neuroscience Methods. 232: 58-62. PMID 24792527 DOI: 10.1016/J.Jneumeth.2014.04.024  1
2014 Codreanu SG, Ullery JC, Zhu J, Tallman KA, Beavers WN, Porter NA, Marnett LJ, Zhang B, Liebler DC. Alkylation damage by lipid electrophiles targets functional protein systems. Molecular & Cellular Proteomics : McP. 13: 849-59. PMID 24429493 DOI: 10.1074/Mcp.M113.032953  1
2014 Ye R, Carneiro AM, Han Q, Airey D, Sanders-Bush E, Zhang B, Lu L, Williams R, Blakely RD. Quantitative trait loci mapping and gene network analysis implicate protocadherin-15 as a determinant of brain serotonin transporter expression. Genes, Brain, and Behavior. 13: 261-75. PMID 24405699 DOI: 10.1111/Gbb.12119  1
2014 Halvey PJ, Wang X, Wang J, Bhat AA, Dhawan P, Li M, Zhang B, Liebler DC, Slebos RJ. Proteogenomic analysis reveals unanticipated adaptations of colorectal tumor cells to deficiencies in DNA mismatch repair. Cancer Research. 74: 387-97. PMID 24247723 DOI: 10.1158/0008-5472.Can-13-2488  1
2014 Kirov S, Ji R, Wang J, Zhang B. Functional annotation of differentially regulated gene set using WebGestalt: a gene set predictive of response to ipilimumab in tumor biopsies. Methods of Molecular Biology. 1101: 31-42. PMID 24233776 DOI: 10.1007/978-1-62703-721-1_3  1
2014 Ye R, Carneiro AM, Airey D, Sanders-Bush E, Williams RW, Lu L, Wang J, Zhang B, Blakely RD. Evaluation of heritable determinants of blood and brain serotonin homeostasis using recombinant inbred mice. Genes, Brain, and Behavior. 13: 247-60. PMID 24102824 DOI: 10.1111/Gbb.12092  1
2013 Zhang B, Huang Y, McDermott JE, Posey RH, Xu H, Zhao Z. Interdisciplinary dialogue for education, collaboration, and innovation: intelligent Biology and Medicine in and beyond 2013. Bmc Genomics. 14: S1. PMID 24564388 DOI: 10.1186/1471-2164-14-S8-S1  1
2013 Zhu J, Wang J, Shi Z, Franklin JL, Deane NG, Coffey RJ, Beauchamp RD, Zhang B. Deciphering genomic alterations in colorectal cancer through transcriptional subtype-based network analysis. Plos One. 8: e79282. PMID 24260186 DOI: 10.1371/Journal.Pone.0079282  1
2013 Wang X, Zhang B. customProDB: an R package to generate customized protein databases from RNA-Seq data for proteomics search Bioinformatics. 29: 3235-3237. PMID 24058055 DOI: 10.1093/Bioinformatics/Btt543  1
2013 Liu Q, Ullery J, Zhu J, Liebler DC, Marnett LJ, Zhang B. RNA-seq data analysis at the gene and CDS levels provides a comprehensive view of transcriptome responses induced by 4-hydroxynonenal. Molecular Biosystems. 9: 3036-46. PMID 24056865 DOI: 10.1039/C3Mb70114J  1
2013 Franklin JL, Rankin CR, Levy S, Snoddy JR, Zhang B, Washington MK, Thomson JM, Whitehead RH, Coffey RJ. Malignant transformation of colonic epithelial cells by a colon-derived long noncoding RNA. Biochemical and Biophysical Research Communications. 440: 99-104. PMID 24045012 DOI: 10.1016/J.Bbrc.2013.09.040  1
2013 Al-Greene NT, Means AL, Lu P, Jiang A, Schmidt CR, Chakravarthy AB, Merchant NB, Washington MK, Zhang B, Shyr Y, Deane NG, Beauchamp RD. Four jointed box 1 promotes angiogenesis and is associated with poor patient survival in colorectal carcinoma. Plos One. 8: e69660. PMID 23922772 DOI: 10.1371/Journal.Pone.0069660  1
2013 Wang J, Qian J, Hoeksema MD, Zou Y, Espinosa AV, Rahman SM, Zhang B, Massion PP. Integrative genomics analysis identifies candidate drivers at 3q26-29 amplicon in squamous cell carcinoma of the lung. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 19: 5580-90. PMID 23908357 DOI: 10.1158/1078-0432.Ccr-13-0594  1
2013 Chen YY, Chambers MC, Li M, Ham AJ, Turner JL, Zhang B, Tabb DL. IDPQuantify: combining precursor intensity with spectral counts for protein and peptide quantification. Journal of Proteome Research. 12: 4111-21. PMID 23879310 DOI: 10.1021/Pr400438Q  1
2013 Shi Z, Wang J, Zhang B. NetGestalt: integrating multidimensional omics data over biological networks. Nature Methods. 10: 597-8. PMID 23807191 DOI: 10.1038/Nmeth.2517  1
2013 Wang J, Duncan D, Shi Z, Zhang B. WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013. Nucleic Acids Research. 41: W77-83. PMID 23703215 DOI: 10.1093/Nar/Gkt439  1
2013 Liu Q, Halvey PJ, Shyr Y, Slebos RJC, Liebler DC, Zhang B. Integrative omics analysis reveals the importance and scope of translational repression in microRNA-mediated regulation Molecular & Cellular Proteomics. 12: 1900-1911. PMID 23550052 DOI: 10.1074/Mcp.M112.025783  1
2013 Ciombor KK, Deane NG, Lewis KB, Chen X, Zhang B, Washington MK, Shi C, Beauchamp RD. Colorectal cancer gene expression profiling using nanostring nCounter analysis. Journal of Clinical Oncology. 31: 3555-3555. DOI: 10.1200/Jco.2013.31.15_Suppl.3555  1
2013 Tripathi MK, Mima S, Shi Z, Prodduturi N, Jing Z, Ciombor KK, Chen X, Deane N, Beauchamp RD, Zhang B. Abstract B101: NFAT regulates a gene expression program associated with invasiveness and poor prognosis in colorectal cancer Cancer Research. 73. DOI: 10.1158/1538-7445.Tim2013-B101  1
2013 Qian J, Wang J, Hoeksema MD, Zou Y, Espinosa AV, Rahman J, Zhang B, Massion PP. Abstract 1804: Integrative genomics and expression analysis reveals enhanced SENP2-mediated desumoylation and a crosstalk with Neddylation pathway in squamous cell carcinoma of the lung. Cancer Research. 73: 1804-1804. DOI: 10.1158/1538-7445.Am2013-1804  1
2012 Wang L, Chen X, Zhang B. Statistical Analysis of Patient-Specific Pathway Activities via Mixed Models. Journal of Biometrics & Biostatistics. 7313. PMID 24124644 DOI: 10.4172/2155-6180.S8-001  1
2012 Jourquin J, Duncan D, Shi Z, Zhang B. GLAD4U: deriving and prioritizing gene lists from PubMed literature. Bmc Genomics. 13: S20. PMID 23282288 DOI: 10.1186/1471-2164-13-S8-S20  1
2012 Zhao Z, Huang Y, Zhang B, Shyr Y, Xu H. Genomics in 2012: challenges and opportunities in the next generation sequencing era. Bmc Genomics. 13: S1. PMID 23281891 DOI: 10.1186/1471-2164-13-S8-S1  1
2012 Huang Y, Zhao Z, Xu H, Shyr Y, Zhang B. Advances in systems biology: computational algorithms and applications. Bmc Systems Biology. 6: S1. PMID 23281622 DOI: 10.1186/1752-0509-6-S3-S1  1
2012 Hoshino D, Jourquin J, Emmons SW, Miller T, Goldgof M, Costello K, Tyson DR, Brown B, Lu Y, Prasad NK, Zhang B, Mills GB, Yarbrough WG, Quaranta V, Seiki M, et al. Network analysis of the focal adhesion to invadopodia transition identifies a PI3K-PKCα invasive signaling axis. Science Signaling. 5: ra66. PMID 22969158 DOI: 10.1126/Scisignal.2002964  1
2012 Sousa JF, Ham AJ, Whitwell C, Nam KT, Lee HJ, Yang HK, Kim WH, Zhang B, Li M, LaFleur B, Liebler DC, Goldenring JR. Proteomic profiling of paraffin-embedded samples identifies metaplasia-specific and early-stage gastric cancer biomarkers. The American Journal of Pathology. 181: 1560-72. PMID 22944598 DOI: 10.1016/J.Ajpath.2012.07.027  1
2012 Hardaway JA, Hardie SL, Whitaker SM, Baas SR, Zhang B, Bermingham DP, Lichtenstein AJ, Blakely RD. Forward genetic analysis to identify determinants of dopamine signaling in Caenorhabditis elegans using swimming-induced paralysis. G3 (Bethesda, Md.). 2: 961-75. PMID 22908044 DOI: 10.1534/G3.112.003533  1
2012 Shi M, Beauchamp RD, Zhang B. A network-based gene expression signature informs prognosis and treatment for colorectal cancer patients. Plos One. 7: e41292. PMID 22844451 DOI: 10.1371/Journal.Pone.0041292  1
2012 Wang X, Slebos RJ, Wang D, Halvey PJ, Tabb DL, Liebler DC, Zhang B. Protein identification using customized protein sequence databases derived from RNA-Seq data. Journal of Proteome Research. 11: 1009-17. PMID 22103967 DOI: 10.1021/Pr200766Z  1
2012 Halvey PJ, Zhang B, Coffey RJ, Liebler DC, Slebos RJC. Proteomic Consequences of a Single Gene Mutation in a Colorectal Cancer Model Journal of Proteome Research. 11: 1184-1195. PMID 22103262 DOI: 10.1021/Pr2009109  1
2012 Tripathi MK, Mima S, Freeman TJ, Weaver C, Deane NG, Zhang B, Beauchamp RD. Abstract 499: NFATc1 is a novel invasion promoter in colorectal cancer Cancer Research. 72: 499-499. DOI: 10.1158/1538-7445.Am2012-499  1
2012 Shi Z, Wang J, Zhang B. Abstract 3976: NetGestalt: A web application for the integration of multidimensional omics data within a network context Cancer Research. 72: 3976-3976. DOI: 10.1158/1538-7445.Am2012-3976  1
2011 Shi M, Zhang B. Semi-supervised learning improves gene expression-based prediction of cancer recurrence Bioinformatics. 27: 3017-3023. PMID 21893520 DOI: 10.1093/Bioinformatics/Btr502  1
2011 Zhang B, Shi Z, Duncan DT, Prodduturi N, Marnett LJ, Liebler DC. Relating protein adduction to gene expression changes: a systems approach. Molecular Biosystems. 7: 2118-27. PMID 21594272 DOI: 10.1039/C1Mb05014A  1
2011 Shi Z, Zhang B. Fast network centrality analysis using GPUs. Bmc Bioinformatics. 12: 149. PMID 21569426 DOI: 10.1186/1471-2105-12-149  1
2011 Lu H, Wang X, Pullen M, Guan H, Chen H, Sahu S, Zhang B, Chen H, Williams RW, Geisert EE, Lu L, Jablonski MM. Genetic dissection of the Gpnmb network in the eye. Investigative Ophthalmology & Visual Science. 52: 4132-42. PMID 21398278 DOI: 10.1167/Iovs.10-6493  1
2011 Li J, Su Z, Ma ZQ, Slebos RJ, Halvey P, Tabb DL, Liebler DC, Pao W, Zhang B. A bioinformatics workflow for variant peptide detection in shotgun proteomics. Molecular & Cellular Proteomics : McP. 10: M110.006536. PMID 21389108 DOI: 10.1074/Mcp.M110.006536  1
2011 Angel PM, Nusinow D, Brown CB, Violette K, Barnett JV, Zhang B, Baldwin HS, Caprioli RM. Networked-based characterization of extracellular matrix proteins from adult mouse pulmonary and aortic valves. Journal of Proteome Research. 10: 812-23. PMID 21133377 DOI: 10.1021/Pr1009806  1
2010 Shi Z, Derow CK, Zhang B. Co-expression module analysis reveals biological processes, genomic gain, and regulatory mechanisms associated with breast cancer progression. Bmc Systems Biology. 4: 74. PMID 20507583 DOI: 10.1186/1752-0509-4-74  1
2010 Thompson DK, Chourey K, Wickham GS, Thieman SB, VerBerkmoes NC, Zhang B, McCarthy AT, Rudisill MA, Shah M, Hettich RL. Proteomics reveals a core molecular response of Pseudomonas putida F1 to acute chromate challenge. Bmc Genomics. 11: 311. PMID 20482812 DOI: 10.1186/1471-2164-11-311  1
2010 Morabito MV, Ulbricht RJ, O'Neil RT, Airey DC, Lu P, Zhang B, Wang L, Emeson RB. High-throughput multiplexed transcript analysis yields enhanced resolution of 5-hydroxytryptamine 2C receptor mRNA editing profiles. Molecular Pharmacology. 77: 895-902. PMID 20181818 DOI: 10.1124/Mol.109.061903  1
2010 Wylie CJ, Hendricks TJ, Zhang B, Wang L, Lu P, Leahy P, Fox S, Maeno H, Deneris ES. Distinct transcriptomes define rostral and caudal serotonin neurons. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 670-84. PMID 20071532 DOI: 10.1523/Jneurosci.4656-09.2010  1
2010 Li J, Duncan DT, Zhang B. CanProVar: A Human Cancer Proteome Variation Database Human Mutation. 31: 219-228. PMID 20052754 DOI: 10.1002/Humu.21176  1
2010 Smith JJ, Deane NG, Wu F, Merchant NB, Zhang B, Jiang A, Lu P, Johnson JC, Schmidt C, Bailey CE, Eschrich S, Kis C, Levy S, Washington MK, Heslin MJ, et al. Experimentally derived metastasis gene expression profile predicts recurrence and death in patients with colon cancer. Gastroenterology. 138: 958-68. PMID 19914252 DOI: 10.1053/J.Gastro.2009.11.005  1
2010 Li J, Ma Z, Slebos RJC, Tabb DL, Liebler DC, Zhang B. Enabling proteomics-based identification of human cancer variations Bmc Bioinformatics. 11: 29. DOI: 10.1186/1471-2105-11-S4-P29  1
2010 Duncan DT, Prodduturi N, Zhang B. WebGestalt2: an updated and expanded version of the Web-based Gene Set Analysis Toolkit Bmc Bioinformatics. 11: 10. DOI: 10.1186/1471-2105-11-S4-P10  1
2010 Slebos RJc, Zhang B, Halvey PJ, Liebler DC. Abstract 4951: In-depth analysis of gene and protein expression levels in the colorectal adenocarcinoma cell line Caco-2 Cancer Research. 70: 4951-4951. DOI: 10.1158/1538-7445.Am10-4951  1
2010 Zimmerman LJ, Zhang B, Sanders ME, Liebler DC. Abstract 3746: Proteomic analysis of laser capture microdissected cells from basal, Her 2 positive and luminal A human breast tumors Cancer Research. 70: 3746-3746. DOI: 10.1158/1538-7445.Am10-3746  1
2010 Sanders M, Manning S, Arteaga C, Balko J, Zhang B, Liebler D, Zimmerman L. Abstract P6-04-11: Quantitative Differences among Spectral Counts Based on LC-MS/MS Spectra Accurately Cluster Basal, Her2-Overexpressing and Luminal A Breast Carcinomas Cancer Research. 70. DOI: 10.1158/0008-5472.Sabcs10-P6-04-11  0.01
2009 Wang L, Chen X, Wolfinger RD, Franklin JL, Coffey RJ, Zhang B. A unified mixed effects model for gene set analysis of time course microarray experiments. Statistical Applications in Genetics and Molecular Biology. 8: Article 47. PMID 19954419 DOI: 10.2202/1544-6115.1484  1
2009 Unell M, Abraham PE, Shah M, Zhang B, Rückert C, VerBerkmoes NC, Jansson JK. Impact of phenolic substrate and growth temperature on the Arthrobacter chlorophenolicus proteome. Journal of Proteome Research. 8: 1953-64. PMID 19714879 DOI: 10.1021/Pr800897C  1
2009 Li J, Zimmerman LJ, Park BH, Tabb DL, Liebler DC, Zhang B. Network-assisted protein identification and data interpretation in shotgun proteomics. Molecular Systems Biology. 5: 303. PMID 19690572 DOI: 10.1038/Msb.2009.54  1
2009 Ball HL, Zhang B, Riches JJ, Gandhi R, Li J, Rommens JM, Myers JS. Shwachman-Bodian Diamond syndrome is a multi-functional protein implicated in cellular stress responses. Human Molecular Genetics. 18: 3684-95. PMID 19602484 DOI: 10.1093/Hmg/Ddp316  1
2009 Gerlee P, Lundh T, Zhang B, Anderson AR. Gene divergence and pathway duplication in the metabolic network of yeast and digital organisms. Journal of the Royal Society, Interface / the Royal Society. 6: 1233-45. PMID 19324678 DOI: 10.1098/Rsif.2008.0514  0.01
2009 Chourey K, Thompson MR, Shah M, Zhang B, Verberkmoes NC, Thompson DK, Hettich RL. Comparative temporal proteomics of a response regulator (SO2426)-deficient strain and wild-type Shewanella oneidensis MR-1 during chromate transformation. Journal of Proteome Research. 8: 59-71. PMID 19118451 DOI: 10.1021/Pr800776D  1
2009 Codreanu SG, Zhang B, Sobecki SM, Billheimer DD, Liebler DC. Global analysis of protein damage by the lipid electrophile 4-hydroxy-2-nonenal. Molecular & Cellular Proteomics : McP. 8: 670-80. PMID 19054759 DOI: 10.1074/Mcp.M800070-Mcp200  1
2008 Wang L, Zhang B, Wolfinger RD, Chen X. An integrated approach for the analysis of biological pathways using mixed models. Plos Genetics. 4: e1000115. PMID 18852846 DOI: 10.1371/Journal.Pgen.1000115  1
2008 Wilmes P, Andersson AF, Lefsrud MG, Wexler M, Shah M, Zhang B, Hettich RL, Bond PL, VerBerkmoes NC, Banfield JF. Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal. The Isme Journal. 2: 853-64. PMID 18449217 DOI: 10.1038/Ismej.2008.38  1
2008 Zhang B, Park BH, Karpinets T, Samatova NF. From pull-down data to protein interaction networks and complexes with biological relevance. Bioinformatics (Oxford, England). 24: 979-86. PMID 18304937 DOI: 10.1093/Bioinformatics/Btn036  1
2008 Pan C, Oda Y, Lankford PK, Zhang B, Samatova NF, Pelletier DA, Harwood CS, Hettich RL. Characterization of anaerobic catabolism of p-coumarate in Rhodopseudomonas palustris by integrating transcriptomics and quantitative proteomics. Molecular & Cellular Proteomics : McP. 7: 938-48. PMID 18156135 DOI: 10.1074/Mcp.M700147-Mcp200  1
2007 Kirov SA, Zhang B, Snoddy JR. Association analysis for large-scale gene set data. Methods in Molecular Biology (Clifton, N.J.). 408: 19-33. PMID 18314575 DOI: 10.1007/978-1-59745-547-3_2  1
2007 Zhang B, Chambers MC, Tabb DL. Proteomic parsimony through bipartite graph analysis improves accuracy and transparency. Journal of Proteome Research. 6: 3549-57. PMID 17676885 DOI: 10.1021/Pr070230D  1
2007 Zhang B, Yu RJ. Hollow-core optical fiber for terahertz wave propagation Proceedings of Spie - the International Society For Optical Engineering. 6279. DOI: 10.1117/12.725750  1
2006 Zhang B, VerBerkmoes NC, Langston MA, Uberbacher E, Hettich RL, Samatova NF. Detecting differential and correlated protein expression in label-free shotgun proteomics. Journal of Proteome Research. 5: 2909-18. PMID 17081042 DOI: 10.1021/Pr0600273  1
2006 Yu Rj, Zhang B, Chen My, Huo L, Tian Zg, Bai Xz. A new solution of reducing polymer optical fiber losses Optics Communications. 266: 536-540. DOI: 10.1016/j.optcom.2006.05.045  1
2005 Baldwin NE, Chesler EJ, Kirov S, Langston MA, Snoddy JR, Williams RW, Zhang B. Computational, integrative, and comparative methods for the elucidation of genetic coexpression networks. Journal of Biomedicine & Biotechnology. 2005: 172-80. PMID 16046823 DOI: 10.1155/Jbb.2005.172  1
2005 Zhang B, Kirov S, Snoddy J. WebGestalt: an integrated system for exploring gene sets in various biological contexts Nucleic Acids Research. 33: 741-748. PMID 15980575 DOI: 10.1093/Nar/Gki475  1
2005 Kirov SA, Peng X, Baker E, Schmoyer D, Zhang B, Snoddy J. GeneKeyDB: a lightweight, gene-centric, relational database to support data mining environments. Bmc Bioinformatics. 6: 72. PMID 15790402 DOI: 10.1186/1471-2105-6-72  1
2004 Urs S, Smith C, Campbell B, Saxton AM, Taylor J, Zhang B, Snoddy J, Jones Voy B, Moustaid-Moussa N. Gene expression profiling in human preadipocytes and adipocytes by microarray analysis. The Journal of Nutrition. 134: 762-70. PMID 15051823 DOI: 10.1093/Jn/134.4.762  1
2004 Zhang B, Schmoyer D, Kirov S, Snoddy J. GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies. Bmc Bioinformatics. 5: 16-16. PMID 14975175 DOI: 10.1186/1471-2105-5-16  1
2002 Ramonell KM, Zhang B, Ewing RM, Chen Y, Xu D, Stacey G, Somerville S. Microarray analysis of chitin elicitation in Arabidopsis thaliana. Molecular Plant Pathology. 3: 301-11. PMID 20569338 DOI: 10.1046/J.1364-3703.2002.00123.X  1
2002 Zhang B, Ramonell K, Somerville S, Stacey G. Characterization of early, chitin-induced gene expression in Arabidopsis. Molecular Plant-Microbe Interactions : Mpmi. 15: 963-70. PMID 12236603 DOI: 10.1094/Mpmi.2002.15.9.963  1
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