Malvika Sharan - Publications

Affiliations: 
2012- University of Würzburg, Würzburg, Bayern, Germany 

12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Aguilar C, Cruz AR, Rodrigues Lopes I, Maudet C, Sunkavalli U, Silva RJ, Sharan M, Lisowski C, Zaldívar-López S, Garrido JJ, Giacca M, Mano M, Eulalio A. Functional screenings reveal different requirements for host microRNAs in Salmonella and Shigella infection. Nature Microbiology. PMID 31792428 DOI: 10.1038/S41564-019-0614-3  0.333
2017 Tawk C, Sharan M, Eulalio A, Vogel J. A systematic analysis of the RNA-targeting potential of secreted bacterial effector proteins. Scientific Reports. 7: 9328. PMID 28839189 DOI: 10.1038/S41598-017-09527-0  0.351
2017 Michaux C, Holmqvist E, Vasicek E, Sharan M, Barquist L, Westermann AJ, Gunn JS, Vogel J. RNA target profiles direct the discovery of virulence functions for the cold-shock proteins CspC and CspE. Proceedings of the National Academy of Sciences of the United States of America. PMID 28611217 DOI: 10.1073/Pnas.1620772114  0.382
2017 Sunkavalli U, Aguilar C, Silva RJ, Sharan M, Cruz AR, Tawk C, Maudet C, Mano M, Eulalio A. Analysis of host microRNA function uncovers a role for miR-29b-2-5p in Shigella capture by filopodia. Plos Pathogens. 13: e1006327. PMID 28394930 DOI: 10.1371/Journal.Ppat.1006327  0.339
2017 Sharan M, Förstner KU, Eulalio A, Vogel J. APRICOT: an integrated computational pipeline for the sequence-based identification and characterization of RNA-binding proteins. Nucleic Acids Research. PMID 28334975 DOI: 10.1093/Nar/Gkx137  0.55
2016 Jiang Y, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo da CE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, ... ... Sharan M, et al. An expanded evaluation of protein function prediction methods shows an improvement in accuracy. Genome Biology. 17: 184. PMID 27604469 DOI: 10.1186/S13059-016-1037-6  0.313
2015 Budd A, Dinkel H, Corpas M, Fuller JC, Rubinat L, Devos DP, Khoueiry PH, Förstner KU, Georgatos F, Rowland F, Sharan M, Binder JX, Grace T, Traphagen K, Gristwood A, et al. Ten simple rules for organizing an unconference. Plos Computational Biology. 11: e1003905. PMID 25633715 DOI: 10.1371/Journal.Pcbi.1003905  0.516
2015 Sharan M. Computational prediction of poteintial RNA interacting bacterial proteins. F1000research. 4. DOI: 10.7490/F1000Research.1110246.1  0.324
2015 Sharan M. Computational identification and characterization of RNA-binding proteins in Salmonella F1000research. 4. DOI: 10.7490/F1000Research.1110222.1  0.325
2014 Maudet C, Mano M, Sunkavalli U, Sharan M, Giacca M, Förstner KU, Eulalio A. Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection. Nature Communications. 5: 4718. PMID 25146723 DOI: 10.1038/Ncomms5718  0.33
2014 Wagner I, Volkmer M, Sharan M, Villaveces JM, Oswald F, Surendranath V, Habermann BH. morFeus: a web-based program to detect remotely conserved orthologs using symmetrical best hits and orthology network scoring. Bmc Bioinformatics. 15: 263. PMID 25096057 DOI: 10.1186/1471-2105-15-263  0.329
2014 Maudet C, Mano M, Sunkavalli U, Sharan M, Giacca M, Förstner KU, Eulalio A. Functional high-throughput screening identifies the miR-15 microRNA family as cellular restriction factors for Salmonella infection Nature Communications. 5. DOI: 10.1038/ncomms5718  0.519
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