| Year |
Citation |
Score |
| 2016 |
Au L, Green DF. Direct Calculation of Protein Fitness Landscapes through Computational Protein Design. Biophysical Journal. 110: 75-84. PMID 26745411 DOI: 10.1016/J.Bpj.2015.11.029 |
0.665 |
|
| 2013 |
Xiao S, Patsalo V, Shan B, Bi Y, Green DF, Raleigh DP. Rational modification of protein stability by targeting surface sites leads to complicated results. Proceedings of the National Academy of Sciences of the United States of America. 110: 11337-42. PMID 23798426 DOI: 10.1073/Pnas.1222245110 |
0.772 |
|
| 2012 |
Fujimoto YK, Green DF. Carbohydrate recognition by the antiviral lectin cyanovirin-N. Journal of the American Chemical Society. 134: 19639-51. PMID 23057413 DOI: 10.1021/Ja305755B |
0.775 |
|
| 2012 |
Marek PJ, Patsalo V, Green DF, Raleigh DP. Ionic strength effects on amyloid formation by amylin are a complicated interplay among Debye screening, ion selectivity, and Hofmeister effects. Biochemistry. 51: 8478-90. PMID 23016872 DOI: 10.1021/Bi300574R |
0.74 |
|
| 2012 |
Patsalo V, Yondola MA, Luan B, Shoshani I, Kisker C, Green DF, Raleigh DP, Hearing P. Biophysical and functional analyses suggest that adenovirus E4-ORF3 protein requires higher-order multimerization to function against promyelocytic leukemia protein nuclear bodies. The Journal of Biological Chemistry. 287: 22573-83. PMID 22573317 DOI: 10.1074/Jbc.M112.344234 |
0.75 |
|
| 2011 |
Patsalo V, Raleigh DP, Green DF. Rational and computational design of stabilized variants of cyanovirin-N that retain affinity and specificity for glycan ligands. Biochemistry. 50: 10698-712. PMID 22032696 DOI: 10.1021/Bi201411C |
0.797 |
|
| 2010 |
Green DF. A Statistical Framework for Hierarchical Methods in Molecular Simulation and Design. Journal of Chemical Theory and Computation. 6: 1682-97. PMID 26615700 DOI: 10.1021/Ct9004504 |
0.364 |
|
| 2010 |
Carrascal N, Green DF. Energetic decomposition with the generalized-born and Poisson-Boltzmann solvent models: lessons from association of G-protein components. The Journal of Physical Chemistry. B. 114: 5096-116. PMID 20355699 DOI: 10.1021/Jp910540Z |
0.714 |
|
| 2009 |
Taskent-Sezgin H, Chung J, Patsalo V, Miyake-Stoner SJ, Miller AM, Brewer SH, Mehl RA, Green DF, Raleigh DP, Carrico I. Interpretation of p-cyanophenylalanine fluorescence in proteins in terms of solvent exposure and contribution of side-chain quenchers: a combined fluorescence, IR and molecular dynamics study. Biochemistry. 48: 9040-6. PMID 19658436 DOI: 10.1021/Bi900938Z |
0.752 |
|
| 2009 |
Green DF. Molecular recognition in protein/carbohydrate systems: From biophysics to anti-viral therapies Biophysical Journal. 96: 599a. DOI: 10.1016/J.Bpj.2008.12.3137 |
0.465 |
|
| 2008 |
Fujimoto YK, Terbush RN, Patsalo V, Green DF. Computational models explain the oligosaccharide specificity of cyanovirin-N. Protein Science : a Publication of the Protein Society. 17: 2008-14. PMID 18809850 DOI: 10.1110/Ps.034637.108 |
0.714 |
|
| 2008 |
Green DF. Optimized parameters for continuum solvation calculations with carbohydrates. The Journal of Physical Chemistry. B. 112: 5238-49. PMID 18386862 DOI: 10.1021/Jp709725B |
0.365 |
|
| 2006 |
Green DF, Dennis AT, Fam PS, Tidor B, Jasanoff A. Rational design of new binding specificity by simultaneous mutagenesis of calmodulin and a target peptide. Biochemistry. 45: 12547-59. PMID 17029410 DOI: 10.1021/Bi060857U |
0.717 |
|
| 2005 |
Green DF, Tidor B. Design of improved protein inhibitors of HIV-1 cell entry: Optimization of electrostatic interactions at the binding interface. Proteins. 60: 644-57. PMID 16001428 DOI: 10.1002/Prot.20540 |
0.734 |
|
| 2005 |
Joughin BA, Green DF, Tidor B. Action-at-a-distance interactions enhance protein binding affinity. Protein Science : a Publication of the Protein Society. 14: 1363-9. PMID 15802650 DOI: 10.1110/Ps.041283105 |
0.793 |
|
| 2004 |
Green DF, Tidor B. Escherichia coli glutaminyl-tRNA synthetase is electrostatically optimized for binding of its cognate substrates. Journal of Molecular Biology. 342: 435-52. PMID 15327945 DOI: 10.1016/J.Jmb.2004.06.087 |
0.734 |
|
| 2004 |
Mattos C, Cohen JD, Green DF, Tidor B, Karplus M. X-ray structural and simulation analysis of a protein mutant: the value of a combined approach. Proteins. 55: 733-42. PMID 15103635 DOI: 10.1002/Prot.20031 |
0.706 |
|
| 2003 |
Green DF, Tidor B. Evaluation of electrostatic interactions. Current Protocols in Bioinformatics / Editoral Board, Andreas D. Baxevanis ... [Et Al.]. Unit 8.3. PMID 18428710 DOI: 10.1002/0471250953.Bi0803S02 |
0.714 |
|
| 2003 |
Green DF, Tidor B. Evaluation of ab initio charge determination methods for use in continuum solvation calculations Journal of Physical Chemistry B. 107: 10261-10273. DOI: 10.1021/Jp0350971 |
0.497 |
|
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