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Kazunori Koide, Ph.D. - Publications

Affiliations: 
2000- Chemistry University of Pittsburgh, Pittsburgh, PA, United States 
Area:
Organic Chemistry
Website:
http://www.chem.pitt.edu/people/faculty/kazunori-koide
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63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Beard JP, Bressin RK, Markaj PL, Schmitz JC, Koide K. Synthesis and Conformational Analysis of FR901464-Based RNA Splicing Modulators and Their Synergism in Drug-Resistant Cancers. Journal of Medicinal Chemistry. 66: 14497-14512. PMID 37870431 DOI: 10.1021/acs.jmedchem.3c00733  0.762
2022 Beard JP, Emerson JD, Jacobs AS, O'Grady AJ, Burrows J, Koide K. Improved Synthesis of the Amine Fragment of FR901464 and Thailanstatins through the Development of a Convenient -Detosylation Method. The Journal of Organic Chemistry. PMID 36153989 DOI: 10.1021/acs.joc.2c01889  0.747
2021 Burrows J, Kamo S, Koide K. Scalable Birch reduction with lithium and ethylenediamine in tetrahydrofuran. Science (New York, N.Y.). 374: 741-746. PMID 34735232 DOI: 10.1126/science.abk3099  0.712
2020 Pham D, Deter CJ, Reinard MC, Gibson GA, Kiselyov K, Yu W, Sandulache VC, St Croix CM, Koide K. Using Ligand-Accelerated Catalysis to Repurpose Fluorogenic Reactions for Platinum or Copper. Acs Central Science. 6: 1772-1788. PMID 33145414 DOI: 10.1021/Acscentsci.0C00676  0.574
2020 Pham D, Basu U, Pohorilets I, St Croix C, Watkins SC, Koide K. Fluorogenic Probe Using a Mislow-Evans Rearrangement for Real-Time Imaging of Hydrogen Peroxide. Angewandte Chemie (International Ed. in English). PMID 32585075 DOI: 10.1002/Anie.202007104  0.654
2020 Bressin RK, Osman S, Pohorilets I, Basu U, Koide K. Total synthesis of meayamycin B. The Journal of Organic Chemistry. PMID 32162521 DOI: 10.1021/Acs.Joc.9B03370  0.772
2020 Bressin R, Osman S, Pohorilets I, Basu U, Koide K. Total Synthesis of MeayamycinB Journal of Organic Chemistry. DOI: 10.1021/Acs.Joc.9B03370.S001  0.607
2019 Pohorilets I, Tracey MP, LeClaire MJ, Moore EM, Lu G, Liu P, Koide K. Kinetics and Inverse Temperature Dependence of a Tsuji–Trost Reaction in Aqueous Buffer Acs Catalysis. 9: 11720-11733. DOI: 10.1021/Acscatal.9B03011  0.766
2019 Lukomski L, Pohorilets I, Koide K. Third-Generation Method for High-Throughput Quantification of Trace Palladium by Color or Fluorescence Organic Process Research & Development. 24: 85-95. DOI: 10.1021/Acs.Oprd.9B00472  0.356
2019 Bressin RK, Driscoll JL, Wang Y, Koide K. Scalable Preparation of Methylated Ando-Type Horner–Wadsworth–Emmons Reagent Organic Process Research & Development. 23: 274-277. DOI: 10.1021/Acs.Oprd.8B00423  0.766
2018 Chan WC, Koide K. Total Synthesis of the Reported Structure of Stresgenin B Enabled by the Diastereoselective Cyanation of an Oxocarbenium. Organic Letters. PMID 30525686 DOI: 10.1021/Acs.Orglett.8B03219  0.33
2017 Nieberding M, Tracey MP, Koide K. Noneffervescent Method for Catalysis-Based Palladium Detection with Color or Fluorescence. Acs Sensors. PMID 29058887 DOI: 10.1021/Acssensors.7B00697  0.772
2017 Ando S, Burrows J, Koide K. Synthesis of Violaceic Acid and Related Compounds through Aryl Triazene. Organic Letters. PMID 28205442 DOI: 10.1021/Acs.Orglett.7B00141  0.751
2016 Koide K, Tracey MP, Bu X, Jo J, Williams MJ, Welch CJ. A competitive and reversible deactivation approach to catalysis-based quantitative assays. Nature Communications. 7: 10691. PMID 26891765 DOI: 10.1038/Ncomms10691  0.765
2016 Basu U, Koide K. Comment on "Virtues and limitations of Pittsburgh green for ozone detection" by C. C. Beltrán, E. A. Palmer, B. R. Buckley and F. Iza, Chem. Commun., 2015, 51, 1579. Chemical Communications (Cambridge, England). PMID 26883090 DOI: 10.1039/C5Cc08289G  0.526
2016 Pham D, Koide K. Discoveries, target identifications, and biological applications of natural products that inhibit splicing factor 3B subunit 1. Natural Product Reports. PMID 26812544 DOI: 10.1039/C5Np00110B  0.559
2016 Wojtuszkiewicz A, Sciarrillo R, Jansen G, Assaraf YG, Koide K, Bressin RK, Basu U, Sonneveld E, Peters GJ, Kaspers GJL, Cloos J. Abstract 4336: Spliceosome inhibition as a novel therapeutic option in acute leukemia Cancer Research. 76: 4336-4336. DOI: 10.1158/1538-7445.Am2016-4336  0.758
2015 Schreiber CA, Sakuma T, Izumiya Y, Holditch SJ, Hickey RD, Bressin RK, Basu U, Koide K, Asokan A, Ikeda Y. An siRNA Screen Identifies the U2 snRNP Spliceosome as a Host Restriction Factor for Recombinant Adeno-associated Viruses. Plos Pathogens. 11: e1005082. PMID 26244496 DOI: 10.1371/Journal.Ppat.1005082  0.748
2015 Tracey MP, Pham D, Koide K. Fluorometric imaging methods for palladium and platinum and the use of palladium for imaging biomolecules. Chemical Society Reviews. 44: 4769-91. PMID 25705016 DOI: 10.1039/C4Cs00323C  0.754
2015 Schreiber C, Sakuma T, Izumiya Y, Holditch S, Hickey R, Bressin R, Basu U, Koide K, Asokan A, Ikeda Y. 41. U2 snRNP Spliceosome Proteins Block Recombinant AAV Vector Transduction Molecular Therapy. 23: S18. DOI: 10.1016/S1525-0016(16)33646-2  0.745
2014 Gao Y, Osman S, Koide K. Total Synthesis and Biological Studies of TMC-205 and Analogues as Anticancer Agents and Activators of SV40 Promoter. Acs Medicinal Chemistry Letters. 5: 863-7. PMID 25147604 DOI: 10.1021/Ml500025P  0.327
2014 Wojtuszkiewicz A, Assaraf YG, Jansen G, Koide K, Bressin RK, Basu U, Sonneveld E, Giovannetti E, Kaspers G, Cloos J. Spliceosome Inhibitor Meayamycin B As a Novel Potential Chemotherapeutic Agent in ALL and AML Blood. 124: 924-924. DOI: 10.1182/Blood.V124.21.924.924  0.756
2014 Knight S, Bressin RK, Basu U, Koide K, Dancis A. Inhibition of Splicing Factor SF3B1: Evaluating Effects on Iron Metabolism in K562 and CD34+ Cells Blood. 124: 1348-1348. DOI: 10.1182/Blood.V124.21.1348.1348  0.747
2014 Tracey MP, Koide K. Development of a sustainable enrichment strategy for quantification of mercury ions in complex samples at the sub-parts per billion level Industrial and Engineering Chemistry Research. 53: 14565-14570. DOI: 10.1021/Ie502003F  0.76
2013 Gao Y, Vogt A, Forsyth CJ, Koide K. Comparison of splicing factor 3b inhibitors in human cells. Chembiochem : a European Journal of Chemical Biology. 14: 49-52. PMID 23172726 DOI: 10.1002/Cbic.201200558  0.303
2013 Bu X, Koide K, Carder EJ, Welch CJ. Rapid analysis of residual palladium in pharmaceutical development using a catalysis-based fluorometric method Organic Process Research and Development. 17: 108-113. DOI: 10.1021/Op3003008  0.313
2012 Cook MP, Ando S, Koide K. One-step synthesis of a fluorescein derivative and mechanistic studies Tetrahedron Letters. 53: 5284-5286. DOI: 10.1016/J.Tetlet.2012.07.084  0.33
2012 Inamoto K, Campbell LD, Doi T, Koide K. A highly sensitive fluorescence method reveals the presence of palladium in a cross-coupling reaction mixture not treated with transition metals Tetrahedron Letters. 53: 3147-3148. DOI: 10.1016/J.Tetlet.2012.04.043  0.319
2011 Koide K, Osman S, Garner AL, Song F, Dixon T, Greenberger JS, Epperly MW. The Use of 3,5,4'-Tri-O-acetylresveratrol as a Potential Pro-drug for Resveratrol Protects Mice from γ-Irradiation-Induced Death. Acs Medicinal Chemistry Letters. 2: 270-274. PMID 21826253 DOI: 10.1021/Ml100159P  0.588
2011 Ando S, Koide K. Development and applications of fluorogenic probes for mercury(II) based on vinyl ether oxymercuration. Journal of the American Chemical Society. 133: 2556-66. PMID 21294513 DOI: 10.1021/Ja108028M  0.302
2011 Osman S, Albert BJ, Wang Y, Li M, Czaicki NL, Koide K. Structural requirements for the antiproliferative activity of pre-mRNA splicing inhibitor FR901464. Chemistry (Weinheim An Der Bergstrasse, Germany). 17: 895-904. PMID 21226105 DOI: 10.1002/Chem.201002402  0.317
2010 Song F, Carder EJ, Kohler CC, Koide K. Studies toward an ideal fluorescence method to measure palladium in functionalized organic molecules: effects of sodium borohydride, temperature, phosphine ligand, and phosphate ions on kinetics. Chemistry (Weinheim An Der Bergstrasse, Germany). 16: 13500-8. PMID 20938936 DOI: 10.1002/Chem.201001316  0.351
2010 Garner AL, St Croix CM, Pitt BR, Leikauf GD, Ando S, Koide K. Erratum: Specific fluorogenic probes for ozone in biological and atmospheric samples Nature Chemistry. 2: 422-422. DOI: 10.1038/Nchem.621  0.577
2009 Garner AL, St Croix CM, Pitt BR, Leikauf GD, Ando S, Koide K. Specific fluorogenic probes for ozone in biological and atmospheric samples. Nature Chemistry. 1: 316-21. PMID 20634904 DOI: 10.1038/Nchem.240  0.61
2009 Albert BJ, McPherson PA, O'Brien K, Czaicki NL, Destefino V, Osman S, Li M, Day BW, Grabowski PJ, Moore MJ, Vogt A, Koide K. Meayamycin inhibits pre-messenger RNA splicing and exhibits picomolar activity against multidrug-resistant cells. Molecular Cancer Therapeutics. 8: 2308-18. PMID 19671752 DOI: 10.1158/1535-7163.Mct-09-0051  0.313
2009 Uchida T, Mills KL, Kuo CH, Roh W, Tung YC, Garner AL, Koide K, Thouless MD, Takayama S. External compression-induced fracture patterning on the surface of poly(dimethylsiloxane) cubes and microspheres. Langmuir : the Acs Journal of Surfaces and Colloids. 25: 3102-7. PMID 19437776 DOI: 10.1021/La801986K  0.56
2009 Garner AL, Song F, Koide K. Enhancement of a catalysis-based fluorometric detection method for palladium through rational fine-tuning of the palladium species. Journal of the American Chemical Society. 131: 5163-71. PMID 19317401 DOI: 10.1021/Ja808385A  0.631
2009 Garner AL, Koide K. Studies of a fluorogenic probe for palladium and platinum leading to a palladium-specific detection method. Chemical Communications (Cambridge, England). 86-8. PMID 19082007 DOI: 10.1039/B814197E  0.628
2009 Garner AL, Koide K. Fluorescent method for platinum detection in buffers and serums for cancer medicine and occupational hazards. Chemical Communications (Cambridge, England). 83-5. PMID 19082006 DOI: 10.1039/B817220J  0.612
2008 Garner AL, Koide K. Oxidation state-specific fluorescent method for palladium(II) and platinum(IV) based on the catalyzed aromatic claisen rearrangement. Journal of the American Chemical Society. 130: 16472-3. PMID 19554719 DOI: 10.1021/Ja8065539  0.617
2008 Song F, Watanabe S, Floreancig PE, Koide K. Oxidation-resistant fluorogenic probe for mercury based on alkyne oxymercuration. Journal of the American Chemical Society. 130: 16460-1. PMID 19049443 DOI: 10.1021/Ja805678R  0.322
2008 Albert BJ, Koide K. Zirconium-promoted epoxide rearrangement-alkynylation sequence. The Journal of Organic Chemistry. 73: 1093-8. PMID 18179236 DOI: 10.1055/S-2008-1042822  0.303
2008 Koide K, Song F, de Groh ED, Garner AL, Mitchell VD, Davidson LA, Hukriede NA. Scalable and concise synthesis of dichlorofluorescein derivatives displaying tissue permeation in live zebrafish embryos. Chembiochem : a European Journal of Chemical Biology. 9: 214-8. PMID 18161734 DOI: 10.1002/Cbic.200700565  0.606
2007 Garner AL, Koide K. Solid-phase olefin cross-metathesis promoted by a linker. Organic Letters. 9: 5235-8. PMID 18001044 DOI: 10.1021/Ol702415X  0.594
2007 Albert BJ, Koide K. How rapidly do epoxides nonspecifically form covalent bonds with thiols in water? Chembiochem : a European Journal of Chemical Biology. 8: 1912-5. PMID 17907119 DOI: 10.1002/Cbic.200700365  0.355
2007 Song F, Garner AL, Koide K. A highly sensitive fluorescent sensor for palladium based on the allylic oxidative insertion mechanism. Journal of the American Chemical Society. 129: 12354-5. PMID 17887672 DOI: 10.1021/Ja073910Q  0.627
2007 Albert BJ, Sivaramakrishnan A, Naka T, Czaicki NL, Koide K. Total syntheses, fragmentation studies, and antitumor/antiproliferative activities of FR901464 and its low picomolar analogue. Journal of the American Chemical Society. 129: 2648-59. PMID 17279752 DOI: 10.1021/Ja067870M  0.368
2007 Koide K, Albert BJ. Total syntheses of FR901464 Yuki Gosei Kagaku Kyokaishi/Journal of Synthetic Organic Chemistry. 65: 119-125. DOI: 10.5059/Yukigoseikyokaishi.65.119  0.345
2006 Albert BJ, Sivaramakrishnan A, Naka T, Koide K. Total synthesis of FR901464, an antitumor agent that regulates the transcription of oncogenes and tumor suppressor genes. Journal of the American Chemical Society. 128: 2792-3. PMID 16506745 DOI: 10.1021/Ja058216U  0.331
2001 Koide K, Finkelstein JM, Ball Z, Verdine GL. A synthetic library of cell-permeable molecules. Journal of the American Chemical Society. 123: 398-408. PMID 11456541 DOI: 10.1021/Ja0023377  0.721
1999 Setyawan J, Koide K, Diller TC, Bunnage ME, Taylor SS, Nicolaou KC, Brunton LL. Inhibition of protein kinases by balanol: specificity within the serine/threonine protein kinase subfamily. Molecular Pharmacology. 56: 370-6. PMID 10419556 DOI: 10.1124/Mol.56.2.370  0.382
1999 Narayana N, Diller TC, Koide K, Bunnage ME, Nicolaou KC, Brunton LL, Xuong NH, Ten Eyck LF, Taylor SS. Crystal structure of the potent natural product inhibitor balanol in complex with the catalytic subunit of cAMP-dependent protein kinase. Biochemistry. 38: 2367-76. PMID 10029530 DOI: 10.2210/Pdb1Bx6/Pdb  0.401
1997 Nicolaou K, Koide K, Xu J, Izraelewicz MH. Synthetic studies on maduropeptin chromophore 2. Synthesis of the madurosamine aryl amide and the C1′C9′ fragments Tetrahedron Letters. 38: 3671-3674. DOI: 10.1016/S0040-4039(97)00724-7  0.444
1997 Nicolaou K, Koide K. Synthetic studies on maduropeptin chromophore 1. Construction of the aryl ether and attempted synthesis of the [7.3.0] bicyclic system Tetrahedron Letters. 38: 3667-3670. DOI: 10.1016/S0040-4039(97)00723-5  0.42
1996 Koide K, Ohno M, Kobayashi S. Glycosyl Fluoride for Glycosidation Promoted by a Catalytic Amount of Gallium Reagent Synthesis. 1996: 1175-1176. DOI: 10.1055/S-1996-4363  0.532
1995 Koide K, Bunnage ME, Gomez Paloma L, Kanter JR, Taylor SS, Brunton LL, Nicolaou KC. Molecular design and biological activity of potent and selective protein kinase inhibitors related to balanol. Chemistry & Biology. 2: 601-8. PMID 9383464 DOI: 10.1016/1074-5521(95)90124-8  0.413
1995 Nicolaou KC, Koide K, Bunnage ME. Total Synthesis of Balanol and Designed Analogues Chemistry - a European Journal. 1: 454-466. DOI: 10.1002/Chem.19950010711  0.485
1995 Nicolaou KC, Piscopio AD, Bertinato P, Chakraborty TK, Minowa N, Koide K. Total Synthesis of Rapamycin Chemistry - a European Journal. 1: 318-333. DOI: 10.1002/Chem.19950010509  0.619
1994 Nicolaou KC, Tiebes J, Theodorakis EA, Rutjes FPJT, Koide K, Sato M, Untersteller E. Total Synthesis of Truncated Brevetoxin B [AFGHIJK] Journal of the American Chemical Society. 116: 9371-9372. DOI: 10.1021/Ja00099A081  0.607
1994 Nicolaou KC, Bunnage ME, Koide K. Total Synthesis of Balanol Journal of the American Chemical Society. 116: 8402-8403. DOI: 10.1021/Ja00097A072  0.426
1993 Piscopio AD, Minowa N, Chakraborty TK, Koide K, Bertinato P, Nicolaou KC. A highly convergent strategy towards rapamycin. Stereoselective construction of the C8–C18 fragment Journal of the Chemical Society, Chemical Communications. 617-618. DOI: 10.1039/C39930000617  0.591
1991 Koide K, Ohno M, Kobayashi S. A new glycosylation reaction based on a “remote activation concept”: glycosyl 2-pyridinecarboxylate as a novel glycosyl donor Tetrahedron Letters. 32: 7065-7068. DOI: 10.1016/0040-4039(91)85041-3  0.52
1990 Kobayashi S, Koide K, Ohno M. Gallium reagents in organic synthesis: Dimethylgallium chloride and triflate as activators in glycosidation using glycopyranosyl fluorides Tetrahedron Letters. 31: 2435-2438. DOI: 10.1016/S0040-4039(00)97382-9  0.539
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