Xiuwen Zheng, Ph.D. - Publications

Affiliations: 
2013 Biostatistics - Public Health University of Washington, Seattle, Seattle, WA 

26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Karczewski KJ, Solomonson M, Chao KR, Goodrich JK, Tiao G, Lu W, Riley-Gillis BM, Tsai EA, Kim HI, Zheng X, Rahimov F, Esmaeeli S, Grundstad AJ, Reppell M, Waring J, et al. Systematic single-variant and gene-based association testing of thousands of phenotypes in 394,841 UK Biobank exomes. Cell Genomics. 2: 100168. PMID 36778668 DOI: 10.1016/j.xgen.2022.100168  0.344
2022 Zhou H, Arapoglou T, Li X, Li Z, Zheng X, Moore J, Asok A, Kumar S, Blue EE, Buyske S, Cox N, Felsenfeld A, Gerstein M, Kenny E, Li B, et al. FAVOR: functional annotation of variants online resource and annotator for variation across the human genome. Nucleic Acids Research. PMID 36350676 DOI: 10.1093/nar/gkac966  0.327
2021 Sofer T, Zheng X, Laurie CA, Gogarten SM, Brody JA, Conomos MP, Bis JC, Thornton TA, Szpiro A, O'Connell JR, Lange EM, Gao Y, Cupples LA, Psaty BM, et al. Variant-specific inflation factors for assessing population stratification at the phenotypic variance level. Nature Communications. 12: 3506. PMID 34108454 DOI: 10.1038/s41467-021-23655-2  0.672
2021 Hu Y, Stilp AM, McHugh CP, Rao S, Jain D, Zheng X, Lane J, Méric de Bellefon S, Raffield LM, Chen MH, Yanek LR, Wheeler M, Yao Y, Ren C, Broome J, et al. Whole-genome sequencing association analysis of quantitative red blood cell phenotypes: The NHLBI TOPMed program. American Journal of Human Genetics. 108: 1165. PMID 34087167 DOI: 10.1016/j.ajhg.2021.04.015  0.639
2021 Hu Y, Stilp AM, McHugh CP, Rao S, Jai D, Zheng X, Lane J, Méric de Bellefon S, Raffield LM, Chen MH, Yanek LR, Wheeler M, Yao Y, Ren C, Broome J, et al. Whole-genome sequencing association analysis of quantitative red blood cell phenotypes: The NHLBI TOPMed program. American Journal of Human Genetics. PMID 33887194 DOI: 10.1016/j.ajhg.2021.04.003  0.672
2020 Zheng X, Davis JW. SAIGEgds - an efficient statistical tool for large-scale PheWAS with mixed models. Bioinformatics (Oxford, England). PMID 32898220 DOI: 10.1093/bioinformatics/btaa731  0.325
2020 Huang YH, Khor SS, Zheng X, Chen HY, Chang YH, Chu HW, Wu PE, Lin YJ, Liao SF, Shen CY, Tokunaga K, Lee MH. A high-resolution HLA imputation system for the Taiwanese population: a study of the Taiwan Biobank. The Pharmacogenomics Journal. PMID 32042094 DOI: 10.1038/S41397-020-0156-3  0.362
2019 Sarnowski C, Leong A, Raffield LM, Wu P, de Vries PS, DiCorpo D, Guo X, Xu H, Liu Y, Zheng X, Hu Y, Brody JA, Goodarzi MO, Hidalgo BA, Highland HM, et al. Impact of Rare and Common Genetic Variants on Diabetes Diagnosis by Hemoglobin A1c in Multi-Ancestry Cohorts: The Trans-Omics for Precision Medicine Program. American Journal of Human Genetics. PMID 31564435 DOI: 10.1016/J.Ajhg.2019.08.010  0.373
2019 Sofer T, Zheng X, Gogarten SM, Laurie CA, Grinde K, Shaffer JR, Shungin D, O'Connell JR, Durazo-Arvizo RA, Raffield L, Lange L, Musani S, Vasan RS, Cupples LA, Reiner AP, et al. A fully adjusted two-stage procedure for rank-normalization in genetic association studies. Genetic Epidemiology. PMID 30653739 DOI: 10.1002/Gepi.22188  0.395
2018 Zheng X. Imputation-Based HLA Typing with SNPs in GWAS Studies. Methods in Molecular Biology (Clifton, N.J.). 1802: 163-176. PMID 29858808 DOI: 10.1007/978-1-4939-8546-3_11  0.419
2017 Pappas DJ, Lizee A, Paunic V, Beutner KR, Motyer A, Vukcevic D, Leslie S, Biesiada J, Meller J, Taylor KD, Zheng X, Zhao LP, Gourraud PA, Hollenbach JA, Mack SJ, et al. Significant variation between SNP-based HLA imputations in diverse populations: the last mile is the hardest. The Pharmacogenomics Journal. PMID 28440342 DOI: 10.1038/Tpj.2017.7  0.392
2017 Zheng X, Gogarten SM, Lawrence M, Stilp A, Conomos MP, Weir BS, Laurie C, Levine D. SeqArray - A storage-efficient high-performance data format for WGS variant calls. Bioinformatics (Oxford, England). PMID 28334390 DOI: 10.1093/Bioinformatics/Btx145  0.697
2016 Martin PJ, Levine DM, Storer BE, Warren EH, Zheng X, Nelson SC, Smith AG, Mortensen BK, Hansen JA. Genome-wide minor histocompatibility matching as related to the risk of graft-versus-host disease. Blood. PMID 27872059 DOI: 10.1182/Blood-2016-09-737700  0.335
2016 Liu J, Ye Z, Mayer JG, Hoch BA, Green C, Rolak L, Cold C, Khor SS, Zheng X, Miyagawa T, Tokunaga K, Brilliant MH, Hebbring SJ. Phenome-wide association study maps new diseases to the human major histocompatibility complex region. Journal of Medical Genetics. PMID 27287392 DOI: 10.1136/Jmedgenet-2016-103867  0.355
2015 Weir BS, Zheng X. SNPs and SNVs in forensic science. Forensic Science International. Genetics Supplement Series. 5: e267-e268. PMID 28794809 DOI: 10.1016/J.Fsigss.2015.09.106  0.576
2015 Zhu Z, Liang Z, Liany H, Yang C, Wen L, Lin Z, Sheng Y, Lin Y, Ye L, Cheng Y, Chang Y, Liu L, Yang L, Shi Y, Shen C, ... ... Zheng X, et al. Discovery of a novel genetic susceptibility locus on X chromosome for systemic lupus erythematosus. Arthritis Research & Therapy. 17: 349. PMID 26635088 DOI: 10.1186/S13075-015-0857-1  0.407
2015 Nunes K, Zheng X, Torres M, Moraes ME, Piovezan BZ, Pontes GN, Kimura L, Carnavalli JE, Mingroni Netto RC, Meyer D. HLA imputation in an admixed population: An assessment of the 1000 Genomes data as a training set. Human Immunology. PMID 26582005 DOI: 10.1016/J.Humimm.2015.11.004  0.387
2015 Zheng X, Weir BS. Eigenanalysis of SNP data with an identity by descent interpretation. Theoretical Population Biology. PMID 26482676 DOI: 10.1016/J.Tpb.2015.09.004  0.605
2015 Weir BS, Zheng X. SNPs and SNVs in forensic science Forensic Science International: Genetics Supplement Series. DOI: 10.1016/j.fsigss.2015.09.106  0.474
2014 Zheng X, Shen J, Cox C, Wakefield JC, Ehm MG, Nelson MR, Weir BS. HIBAG--HLA genotype imputation with attribute bagging. The Pharmacogenomics Journal. 14: 192-200. PMID 23712092 DOI: 10.1038/Tpj.2013.18  0.594
2013 Crosslin DR, McDavid A, Weston N, Zheng X, Hart E, de Andrade M, Kullo IJ, McCarty CA, Doheny KF, Pugh E, Kho A, Hayes MG, Ritchie MD, Saip A, Crawford DC, et al. Genetic variation associated with circulating monocyte count in the eMERGE Network. Human Molecular Genetics. 22: 2119-27. PMID 23314186 DOI: 10.1093/Hmg/Ddt010  0.377
2012 Zheng X, Levine D, Shen J, Gogarten SM, Laurie C, Weir BS. A high-performance computing toolset for relatedness and principal component analysis of SNP data. Bioinformatics (Oxford, England). 28: 3326-8. PMID 23060615 DOI: 10.1093/Bioinformatics/Bts606  0.599
2012 Gogarten SM, Bhangale T, Conomos MP, Laurie CA, McHugh CP, Painter I, Zheng X, Crosslin DR, Levine D, Lumley T, Nelson SC, Rice K, Shen J, Swarnkar R, Weir BS, et al. GWASTools: an R/Bioconductor package for quality control and analysis of genome-wide association studies. Bioinformatics (Oxford, England). 28: 3329-31. PMID 23052040 DOI: 10.1093/Bioinformatics/Bts610  0.702
2012 Laurie CC, Laurie CA, Rice K, Doheny KF, Zelnick LR, McHugh CP, Ling H, Hetrick KN, Pugh EW, Amos C, Wei Q, Wang LE, Lee JE, Barnes KC, Hansel NN, ... ... Zheng X, et al. Detectable clonal mosaicism from birth to old age and its relationship to cancer. Nature Genetics. 44: 642-50. PMID 22561516 DOI: 10.1038/Ng.2271  0.671
2012 Crosslin DR, McDavid A, Weston N, Nelson SC, Zheng X, Hart E, de Andrade M, Kullo IJ, McCarty CA, Doheny KF, Pugh E, Kho A, Hayes MG, Pretel S, Saip A, et al. Genetic variants associated with the white blood cell count in 13,923 subjects in the eMERGE Network. Human Genetics. 131: 639-52. PMID 22037903 DOI: 10.1007/S00439-011-1103-9  0.426
2010 Laurie CC, Doheny KF, Mirel DB, Pugh EW, Bierut LJ, Bhangale T, Boehm F, Caporaso NE, Cornelis MC, Edenberg HJ, Gabriel SB, Harris EL, Hu FB, Jacobs KB, Kraft P, ... ... Zheng X, et al. Quality control and quality assurance in genotypic data for genome-wide association studies. Genetic Epidemiology. 34: 591-602. PMID 20718045 DOI: 10.1002/Gepi.20516  0.619
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