Brian S. Yandell - Publications

Affiliations: 
University of Wisconsin, Madison, Madison, WI 
Area:
Statistics

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kruijer W, Behrouzi P, Bustos-Korts D, Rodríguez-Álvarez MX, Mahmoudi SM, Yandell B, Wit E, van Eeuwijk FA. Reconstruction of Networks with Direct and Indirect Genetic Effects. Genetics. 214: 781-807. PMID 32015018 DOI: 10.1534/Genetics.119.302949  0.399
2019 Boehm F, Yandell B, Broman KW. qtl2pleio: Testing pleiotropy vs. separate QTL in multiparental populations. Journal of Open Source Software. 4. PMID 32715273 DOI: 10.21105/Joss.01435  0.394
2019 Kemis JH, Linke V, Barrett KL, Boehm FJ, Traeger LL, Keller MP, Rabaglia ME, Schueler KL, Stapleton DS, Gatti DM, Churchill GA, Amador-Noguez D, Russell JD, Yandell BS, Broman KW, et al. Genetic determinants of gut microbiota composition and bile acid profiles in mice. Plos Genetics. 15: e1008073. PMID 31465442 DOI: 10.1371/Journal.Pgen.1008073  0.358
2019 Keller MP, Rabaglia ME, Schueler KL, Stapleton DS, Gatti DM, Vincent M, Mitok KA, Wang Z, Ishimura T, Simonett SP, Emfinger CH, Das R, Beck T, Kendziorski C, Broman KW, ... Yandell BS, et al. Gene loci associated with insulin secretion in islets from non-diabetic mice. The Journal of Clinical Investigation. 130. PMID 31343992 DOI: 10.1172/Jci129143  0.363
2019 Boehm FJ, Chesler EJ, Yandell BS, Broman KW. Testing Pleiotropy Separate QTL in Multiparental Populations. G3 (Bethesda, Md.). PMID 31092608 DOI: 10.1534/G3.119.400098  0.395
2018 Broman KW, Gatti DM, Simecek P, Furlotte NA, Prins P, Sen Ś, Yandell BS, Churchill GA. R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multi-parent Populations. Genetics. PMID 30591514 DOI: 10.1534/Genetics.118.301595  0.333
2018 Keller MP, Gatti DM, Schueler KL, Rabaglia ME, Stapleton DS, Simecek P, Vincent M, Allen S, Broman AT, Bacher R, Kendziorski C, Broman KW, Yandell BS, Churchill GA, Attie AD. Genetic Drivers of Pancreatic Islet Function. Genetics. PMID 29567659 DOI: 10.1534/Genetics.118.300864  0.393
2017 Turner SD, Maurizio PL, Valdar W, Yandell BS, Simon P. Dissecting the Genetic Architecture of Shoot Growth in Carrot (Daucus carota L.) Using a Diallel Mating Design. G3 (Bethesda, Md.). PMID 29187419 DOI: 10.1534/G3.117.300235  0.36
2017 Kreznar JH, Keller MP, Traeger LL, Rabaglia ME, Schueler KL, Stapleton DS, Zhao W, Vivas EI, Yandell BS, Broman AT, Hagenbuch B, Attie AD, Rey FE. Host Genotype and Gut Microbiome Modulate Insulin Secretion and Diet-Induced Metabolic Phenotypes. Cell Reports. 18: 1739-1750. PMID 28199845 DOI: 10.1016/J.Celrep.2017.01.062  0.313
2016 Keller MP, Paul PK, Rabaglia ME, Stapleton DS, Schueler KL, Broman AT, Ye SI, Leng N, Brandon CJ, Neto EC, Plaisier CL, Simonett SP, Kebede MA, Sheynkman GM, Klein MA, ... ... Yandell BS, et al. The Transcription Factor Nfatc2 Regulates β-Cell Proliferation and Genes Associated with Type 2 Diabetes in Mouse and Human Islets. Plos Genetics. 12: e1006466. PMID 27935966 DOI: 10.1371/Journal.Pgen.1006466  0.333
2016 Calderón CI, Yandell BS, Doebley JF. Fine Mapping of a QTL Associated with Kernel Row Number on Chromosome 1 of Maize. Plos One. 11: e0150276. PMID 26930509 DOI: 10.1371/Journal.Pone.0150276  0.341
2016 Tian J, Keller MP, Broman AT, Kendziorski C, Yandell BS, Attie AD, Broman KW. The Dissection of Expression Quantitative Trait Locus Hotspots. Genetics. 202: 1563-74. PMID 26837753 DOI: 10.1534/Genetics.115.183624  0.394
2016 Sinasac DS, Riordan JD, Spiezio SH, Yandell BS, Croniger CM, Nadeau JH. Genetic control of obesity, glucose homeostasis, dyslipidemia and fatty liver in a mouse model of diet-induced metabolic syndrome. International Journal of Obesity (2005). 40: 346-55. PMID 26381349 DOI: 10.1038/Ijo.2015.184  0.337
2015 Tian J, Keller MP, Oler AT, Rabaglia ME, Schueler KL, Stapleton DS, Broman AT, Zhao W, Kendziorski C, Yandell BS, Hagenbuch B, Broman KW, Attie AD. Identification of the Bile Acid Transporter Slco1a6 as a Candidate Gene That Broadly Affects Gene Expression in Mouse Pancreatic Islets. Genetics. 201: 1253-62. PMID 26385979 DOI: 10.1534/Genetics.115.179432  0.367
2015 Broman KW, Keller MP, Broman AT, Kendziorski C, Yandell BS, Sen Ś, Attie AD. Identification and Correction of Sample Mix-Ups in Expression Genetic Data: A Case Study. G3 (Bethesda, Md.). 5: 2177-86. PMID 26290572 DOI: 10.1534/G3.115.019778  0.36
2013 Neto EC, Broman AT, Keller MP, Attie AD, Zhang B, Zhu J, Yandell BS. Modeling causality for pairs of phenotypes in system genetics. Genetics. 193: 1003-13. PMID 23288936 DOI: 10.1534/Genetics.112.147124  0.357
2012 Tu Z, Keller MP, Zhang C, Rabaglia ME, Greenawalt DM, Yang X, Wang IM, Dai H, Bruss MD, Lum PY, Zhou YP, Kemp DM, Kendziorski C, Yandell BS, Attie AD, et al. Integrative analysis of a cross-loci regulation network identifies App as a gene regulating insulin secretion from pancreatic islets. Plos Genetics. 8: e1003107. PMID 23236292 DOI: 10.1371/Journal.Pgen.1003107  0.396
2012 Neto EC, Keller MP, Broman AF, Attie AD, Jansen RC, Broman KW, Yandell BS. Quantile-based permutation thresholds for quantitative trait loci hotspots. Genetics. 191: 1355-65. PMID 22661325 DOI: 10.1534/Genetics.112.139451  0.392
2012 Wang CY, Stapleton DS, Schueler KL, Rabaglia ME, Oler AT, Keller MP, Kendziorski CM, Broman KW, Yandell BS, Schadt EE, Attie AD. Tsc2, a positional candidate gene underlying a quantitative trait locus for hepatic steatosis. Journal of Lipid Research. 53: 1493-501. PMID 22628617 DOI: 10.1194/Jlr.M025239  0.372
2012 Casellas J, Gularte RJ, Farber CR, Varona L, Mehrabian M, Schadt EE, Lusis AJ, Attie AD, Yandell BS, Medrano JF. Genome scans for transmission ratio distortion regions in mice. Genetics. 191: 247-59. PMID 22367040 DOI: 10.1534/Genetics.111.135988  0.383
2011 Bhatnagar S, Oler AT, Rabaglia ME, Stapleton DS, Schueler KL, Truchan NA, Worzella SL, Stoehr JP, Clee SM, Yandell BS, Keller MP, Thurmond DC, Attie AD. Positional cloning of a type 2 diabetes quantitative trait locus; tomosyn-2, a negative regulator of insulin secretion. Plos Genetics. 7: e1002323. PMID 21998599 DOI: 10.1371/Journal.Pgen.1002323  0.327
2011 Wang P, Dawson JA, Keller MP, Yandell BS, Thornberry NA, Zhang BB, Wang IM, Schadt EE, Attie AD, Kendziorski C. A model selection approach for expression quantitative trait loci (eQTL) mapping. Genetics. 187: 611-21. PMID 21115971 DOI: 10.1534/Genetics.110.122796  0.423
2010 Neto EC, Keller MP, Attie AD, Yandell BS. CAUSAL GRAPHICAL MODELS IN SYSTEMS GENETICS: A UNIFIED FRAMEWORK FOR JOINT INFERENCE OF CAUSAL NETWORK AND GENETIC ARCHITECTURE FOR CORRELATED PHENOTYPES. The Annals of Applied Statistics. 4: 320-339. PMID 21218138 DOI: 10.1214/09-Aoas288  0.412
2010 Zhong H, Beaulaurier J, Lum PY, Molony C, Yang X, Macneil DJ, Weingarth DT, Zhang B, Greenawalt D, Dobrin R, Hao K, Woo S, Fabre-Suver C, Qian S, Tota MR, ... ... Yandell BS, et al. Liver and adipose expression associated SNPs are enriched for association to type 2 diabetes. Plos Genetics. 6: e1000932. PMID 20463879 DOI: 10.1371/Journal.Pgen.1000932  0.355
2010 Manichaikul A, Moon JY, Sen S, Yandell BS, Broman KW. A model selection approach for the identification of quantitative trait loci in experimental crosses, allowing epistasis (Genetics 181 (1077-1086)) Genetics. 184: 607. DOI: 10.1534/Genetics.109.112912  0.636
2009 Zhao E, Keller MP, Rabaglia ME, Oler AT, Stapleton DS, Schueler KL, Neto EC, Moon JY, Wang P, Wang IM, Lum PY, Ivanovska I, Cleary M, Greenawalt D, Tsang J, ... ... Yandell BS, et al. Obesity and genetics regulate microRNAs in islets, liver, and adipose of diabetic mice. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 20: 476-85. PMID 19727952 DOI: 10.1007/S00335-009-9217-2  0.593
2009 Just BJ, Santos CA, Yandell BS, Simon PW. Major QTL for carrot color are positionally associated with carotenoid biosynthetic genes and interact epistatically in a domesticated x wild carrot cross. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 119: 1155-69. PMID 19657616 DOI: 10.1007/S00122-009-1117-Z  0.308
2009 Khatib H, Huang W, Wang X, Tran AH, Bindrim AB, Schutzkus V, Monson RL, Yandell BS. Single gene and gene interaction effects on fertilization and embryonic survival rates in cattle Journal of Dairy Science. 92: 2238-2247. PMID 19389983 DOI: 10.3168/Jds.2008-1767  0.32
2009 Manichaikul A, Moon JY, Sen S, Yandell BS, Broman KW. A model selection approach for the identification of quantitative trait loci in experimental crosses, allowing epistasis. Genetics. 181: 1077-86. PMID 19104078 DOI: 10.1534/Genetics.108.094565  0.628
2008 Banerjee S, Yandell BS, Yi N. Bayesian quantitative trait loci mapping for multiple traits. Genetics. 179: 2275-89. PMID 18689903 DOI: 10.1534/Genetics.108.088427  0.414
2008 Dietz JA, Li Y, Chung LM, Yandell BS, Schlamp CL, Nickells RW. Rgcs1, a dominant QTL that affects retinal ganglion cell death after optic nerve crush in mice. Bmc Neuroscience. 9: 74. PMID 18671875 DOI: 10.1186/1471-2202-9-74  0.32
2008 Chaibub Neto E, Ferrara CT, Attie AD, Yandell BS. Inferring causal phenotype networks from segregating populations. Genetics. 179: 1089-100. PMID 18505877 DOI: 10.1534/Genetics.107.085167  0.719
2008 Ferrara CT, Wang P, Neto EC, Stevens RD, Bain JR, Wenner BR, Ilkayeva OR, Keller MP, Blasiole DA, Kendziorski C, Yandell BS, Newgard CB, Attie AD. Genetic networks of liver metabolism revealed by integration of metabolic and transcriptional profiling. Plos Genetics. 4: e1000034. PMID 18369453 DOI: 10.1371/Journal.Pgen.1000034  0.384
2008 Keller MP, Choi Y, Wang P, Davis DB, Rabaglia ME, Oler AT, Stapleton DS, Argmann C, Schueler KL, Edwards S, Steinberg HA, Chaibub Neto E, Kleinhanz R, Turner S, Hellerstein MK, ... ... Yandell BS, et al. A gene expression network model of type 2 diabetes links cell cycle regulation in islets with diabetes susceptibility. Genome Research. 18: 706-16. PMID 18347327 DOI: 10.1101/Gr.074914.107  0.709
2007 Weber A, Clark RM, Vaughn L, Sánchez-Gonzalez Jde J, Yu J, Yandell BS, Bradbury P, Doebley J. Major regulatory genes in maize contribute to standing variation in teosinte (Zea mays ssp. parviglumis). Genetics. 177: 2349-59. PMID 17947410 DOI: 10.1534/Genetics.107.080424  0.345
2007 Stupar RM, Bhaskar PB, Yandell BS, Rensink WA, Hart AL, Ouyang S, Veilleux RE, Busse JS, Erhardt RJ, Buell CR, Jiang J. Phenotypic and transcriptomic changes associated with potato autopolyploidization. Genetics. 176: 2055-67. PMID 17565939 DOI: 10.1534/Genetics.107.074286  0.308
2007 Yi N, Banerjee S, Pomp D, Yandell BS. Bayesian mapping of genomewide interacting quantitative trait loci for ordinal traits. Genetics. 176: 1855-64. PMID 17507680 DOI: 10.1534/Genetics.107.071142  0.399
2007 Yi N, Shriner D, Banerjee S, Mehta T, Pomp D, Yandell BS. An efficient Bayesian model selection approach for interacting quantitative trait loci models with many effects. Genetics. 176: 1865-77. PMID 17483424 DOI: 10.1534/Genetics.107.071365  0.414
2007 Goodarzi MO, Lehman DM, Taylor KD, Guo X, Cui J, Quiñones MJ, Clee SM, Yandell BS, Blangero J, Hsueh WA, Attie AD, Stern MP, Rotter JI. SORCS1: a novel human type 2 diabetes susceptibility gene suggested by the mouse. Diabetes. 56: 1922-9. PMID 17426289 DOI: 10.2337/Db06-1677  0.347
2007 Yandell BS, Mehta T, Banerjee S, Shriner D, Venkataraman R, Moon JY, Neely WW, Wu H, von Smith R, Yi N. R/qtlbim: QTL with Bayesian Interval Mapping in experimental crosses. Bioinformatics (Oxford, England). 23: 641-3. PMID 17237038 DOI: 10.1093/Bioinformatics/Btm011  0.615
2007 Yandell BS. Graphical data presentation, with emphasis on genetic data Hortscience. 42: 1047-1051. DOI: 10.21273/Hortsci.42.5.1047  0.305
2007 Jin C, Fine JP, Yandell BS. A unified semiparametric framework for quantitative trait loci analyses, with application to spike phenotypes Journal of the American Statistical Association. 102: 56-67. DOI: 10.1198/016214506000000834  0.616
2006 Clee SM, Yandell BS, Schueler KM, Rabaglia ME, Richards OC, Raines SM, Kabara EA, Klass DM, Mui ET, Stapleton DS, Gray-Keller MP, Young MB, Stoehr JP, Lan H, Boronenkov I, et al. Positional cloning of Sorcs1, a type 2 diabetes quantitative trait locus. Nature Genetics. 38: 688-93. PMID 16682971 DOI: 10.1038/Ng1796  0.353
2006 Lan H, Chen M, Flowers JB, Yandell BS, Stapleton DS, Mata CM, Mui ET, Flowers MT, Schueler KL, Manly KF, Williams RW, Kendziorski C, Attie AD. Combined expression trait correlations and expression quantitative trait locus mapping. Plos Genetics. 2: e6. PMID 16424919 DOI: 10.1371/Journal.Pgen.0020006  0.406
2005 Yi N, Yandell BS, Churchill GA, Allison DB, Eisen EJ, Pomp D. Bayesian model selection for genome-wide epistatic quantitative trait loci analysis. Genetics. 170: 1333-44. PMID 15911579 DOI: 10.1534/Genetics.104.040386  0.395
2004 Jin C, Lan H, Attie AD, Churchill GA, Bulutuglo D, Yandell BS. Selective phenotyping for increased efficiency in genetic mapping studies. Genetics. 168: 2285-93. PMID 15611192 DOI: 10.1534/Genetics.104.027524  0.6
2004 Fine JP, Zou F, Yandell BS. Nonparametric estimation of the effects of quantitative trait loci. Biostatistics (Oxford, England). 5: 501-13. PMID 15475415 DOI: 10.1093/Biostatistics/Kxh004  0.532
2004 Stoehr JP, Byers JE, Clee SM, Lan H, Boronenkov IV, Schueler KL, Yandell BS, Attie AD. Identification of major quantitative trait loci controlling body weight variation in ob/ob mice. Diabetes. 53: 245-9. PMID 14693723 DOI: 10.2337/Diabetes.53.1.245  0.306
2004 Lan H, Rabaglia ME, Schueler KL, Mata C, Yandell BS, Attie AD. Distinguishing covariation from causation in diabetes: a lesson from the protein disulfide isomerase mRNA abundance trait. Diabetes. 53: 240-4. PMID 14693722 DOI: 10.2337/Diabetes.53.1.240  0.377
2003 Zou F, Yandell BS, Fine JP. Rank-based statistical methodologies for quantitative trait locus mapping. Genetics. 165: 1599-605. PMID 14668406  0.478
2003 Lan H, Rabaglia ME, Stoehr JP, Nadler ST, Schueler KL, Zou F, Yandell BS, Attie AD. Gene expression profiles of nondiabetic and diabetic obese mice suggest a role of hepatic lipogenic capacity in diabetes susceptibility. Diabetes. 52: 688-700. PMID 12606510 DOI: 10.2337/Diabetes.52.3.688  0.49
2002 Balding DJ, Carothers AD, Marchini JL, Cardon LR, Vetta A, Griffiths B, Weir BS, Hill WG, Goldstein D, Strimmer K, Myers S, Beaumont MA, Glasbey CA, Mayer CD, Richardson S, ... ... Yandell BS, et al. Discussion on the meeting on 'statistical modelling and analysis of genetic data' Journal of the Royal Statistical Society. Series B: Statistical Methodology. 64: 737-775. DOI: 10.1111/1467-9868.00359  0.497
2002 Zou F, Fine JP, Yandell BS. On empirical likelihood for a semiparametric mixture model Biometrika. 89: 61-75. DOI: 10.1093/Biomet/89.1.61  0.312
2002 Kole C, Thormann C, Karlsson B, Palta J, Gaffney P, Yandell B, Osborn T. Molecular Breeding. 9: 201-210. DOI: 10.1023/A:1019759512347  0.37
2001 Zou F, Yandell BS, Fine JP. Statistical issues in the analysis of quantitative traits in combined crosses. Genetics. 158: 1339-46. PMID 11454780  0.44
2000 Stoehr JP, Nadler ST, Schueler KL, Rabaglia ME, Yandell BS, Metz SA, Attie AD. Genetic obesity unmasks nonlinear interactions between murine type 2 diabetes susceptibility loci. Diabetes. 49: 1946-54. PMID 11078464 DOI: 10.2337/Diabetes.49.11.1946  0.366
2000 Nadler ST, Stoehr JP, Schueler KL, Tanimoto G, Yandell BS, Attie AD. The expression of adipogenic genes is decreased in obesity and diabetes mellitus. Proceedings of the National Academy of Sciences of the United States of America. 97: 11371-6. PMID 11027337 DOI: 10.1073/Pnas.97.21.11371  0.312
2000 Attie A, Stoehr J, Nadler S, Rabaglia M, Yandell B, Schueler K, Metz S. Obesity and diabetes gene loci in genetically obese mice Atherosclerosis. 151: 86. DOI: 10.1016/S0021-9150(00)80389-5  0.321
1999 Kidwell KK, Hartweck LM, Yandell BS, Crump PM, Brummer JE, Moutray J, Osborn TC. Forage yields of alfalfa populations derived from parents selected on the basis of molecular marker diversity Crop Science. 39: 223-227. DOI: 10.2135/Cropsci1999.0011183X003900010034X  0.3
1999 Young R, Yandell B. Top-Down Versus Bottom-Up Analyses Of Interlanguage Data Studies in Second Language Acquisition. 21: 477-488. DOI: 10.1017/S0272263199003058  0.305
1996 Scott TA, Yandell B, Zepeda L, Shaver RD, Smith TR. Use of Lactation Curves for Analysis of Milk Production Data Journal of Dairy Science. 79: 1885-1894. PMID 8923260 DOI: 10.3168/Jds.S0022-0302(96)76557-8  0.308
1995 Teutonico RA, Yandell B, Satagopan JM, Ferreira ME, Palta JP, Osborn TC. Genetic analysis and mapping of genes controlling freezing tolerance in oilseedBrassica Molecular Breeding. 1: 329-339. DOI: 10.1007/Bf01248410  0.374
1995 Ferreira ME, Satagopan J, Yandell BS, Williams PH, Osborn TC. Mapping loci controlling vernalization requirement and flowering time in Brassica napus Theoretical and Applied Genetics. 90: 727-732. DOI: 10.1007/Bf00222140  0.336
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