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Yan Zhou - Publications

Affiliations: 
Microbiology Fudan university, Shanghai, Shanghai Shi, China 
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32 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Deng X, Zhao X, Liang Y, Zhang L, Jiang J, Zhao G, Zhou Y. Modification of the genome topology network and its application to the comparison of group B Streptococcus genomes. Bmc Genomics. 20: 886. PMID 31752672 DOI: 10.1186/S12864-019-6234-8  0.333
2019 Dai X, Li R, Li X, Liang Y, Gao Y, Xu Y, Shi L, Zhou Y, Wang H. Gene duplication and subsequent functional diversification of sucrose hydrolase in Papilio xuthus. Insect Molecular Biology. PMID 31155808 DOI: 10.1111/Imb.12603  0.304
2017 Dou T, Gao Y, Chen C, Xu M, Fu M, Zhang L, Zhou Y. Optimized Exon-Exon Junction Library and its Application on Rodents' Brain Transcriptome Analysis Brazilian Archives of Biology and Technology. 60. DOI: 10.1590/1678-4324-2016160240  0.33
2016 Tang B, Xie F, Zhao W, Wang J, Dai S, Zheng H, Ding X, Cen X, Liu H, Yu Y, Zhou H, Zhou Y, Zhang L, Goodfellow M, Zhao GP. A systematic study of the whole genome sequence of Amycolatopsis methanolica strain 239(T) provides an insight into its physiological and taxonomic properties which correlate with its position in the genus. Synthetic and Systems Biotechnology. 1: 169-186. PMID 29062941 DOI: 10.1016/J.Synbio.2016.05.001  0.337
2016 He EM, Chen CW, Guo Y, Hsu MH, Zhang L, Chen HL, Zhao GP, Chiu CH, Zhou Y. The genome of serotype VI Streptococcus agalactiae serotype VI and comparative analysis. Gene. PMID 27773726 DOI: 10.1016/J.Gene.2016.10.030  0.348
2015 Chen C, Yao Y, Zhang L, Xu M, Jiang J, Dou T, Lin W, Zhao G, Huang M, Zhou Y. A Comprehensive Analysis of the Transcriptomes of Marssonina brunnea and Infected Poplar Leaves to Capture Vital Events in Host-Pathogen Interactions. Plos One. 10: e0134246. PMID 26222429 DOI: 10.1371/Journal.Pone.0134246  0.326
2015 Jiang J, Gu J, Zhang L, Zhang C, Deng X, Dou T, Zhao G, Zhou Y. Comparing Mycobacterium tuberculosis genomes using genome topology networks. Bmc Genomics. 16: 85. PMID 25766780 DOI: 10.1186/S12864-015-1259-0  0.345
2013 Zheng H, Zhang W, Zhang L, Zhang Z, Li J, Lu G, Zhu Y, Wang Y, Huang Y, Liu J, Kang H, Chen J, Wang L, Chen A, Yu S, ... ... Zhou Y, et al. The genome of the hydatid tapeworm Echinococcus granulosus. Nature Genetics. 45: 1168-75. PMID 24013640 DOI: 10.1038/Ng.2757  0.332
2013 Yang H, Zhou Y, Gu J, Xie S, Xu Y, Zhu G, Wang L, Huang J, Ma H, Yao J. Deep mRNA sequencing analysis to capture the transcriptome landscape of zebrafish embryos and larvae. Plos One. 8: e64058. PMID 23700457 DOI: 10.1371/Journal.Pone.0064058  0.331
2013 Bao D, Gong M, Zheng H, Chen M, Zhang L, Wang H, Jiang J, Wu L, Zhu Y, Zhu G, Zhou Y, Li C, Wang S, Zhao Y, Zhao G, et al. Sequencing and comparative analysis of the straw mushroom (Volvariella volvacea) genome. Plos One. 8: e58294. PMID 23526973 DOI: 10.1371/Journal.Pone.0058294  0.323
2012 Zhu S, Cao YZ, Jiang C, Tan BY, Wang Z, Feng S, Zhang L, Su XH, Brejova B, Vinar T, Xu M, Wang MX, Zhang SG, Huang MR, Wu R, ... Zhou Y, et al. Sequencing the genome of Marssonina brunnea reveals fungus-poplar co-evolution. Bmc Genomics. 13: 382. PMID 22876864 DOI: 10.1186/1471-2164-13-382  0.33
2012 Gu JL, Chen SX, Dou TH, Xu MJ, Xu JX, Zhang L, Hu W, Wang SY, Zhou Y. Hox genes from the parasitic flatworm Schistosoma japonicum. Genomics. 99: 59-65. PMID 22100282 DOI: 10.1016/J.Ygeno.2011.10.008  0.359
2011 Zheng P, Xia Y, Xiao G, Xiong C, Hu X, Zhang S, Zheng H, Huang Y, Zhou Y, Wang S, Zhao GP, Liu X, St Leger RJ, Wang C. Genome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional Chinese medicine. Genome Biology. 12: R116. PMID 22112802 DOI: 10.1186/Gb-2011-12-11-R116  0.334
2010 Dou T, Xu J, Gao Y, Gu J, Ji C, Xie Y, Zhou Y. Evolution of peroxisome proliferator-activated receptor gamma alternative splicing. Frontiers in Bioscience. 2: 1334-1343. PMID 20515805 DOI: 10.2741/E193  0.314
2010 He QL, Cui SJ, Gu JL, Zhang H, Wang MX, Zhou Y, Zhang L, Huang MR. Analysis of floral transcription factors from Lycoris longituba. Genomics. 96: 119-27. PMID 20406677 DOI: 10.1016/J.Ygeno.2010.04.002  0.31
2010 Qin J, Li R, Raes J, Arumugam M, Burgdorf KS, Manichanh C, Nielsen T, Pons N, Levenez F, Yamada T, Mende DR, Li J, Xu J, Li S, Li D, ... ... Zhou Y, et al. A human gut microbial gene catalogue established by metagenomic sequencing. Nature. 464: 59-65. PMID 20203603 DOI: 10.1038/Nature08821  0.346
2010 Li R, Fan W, Tian G, Zhu H, He L, Cai J, Huang Q, Cai Q, Li B, Bai Y, Zhang Z, Zhang Y, Wang W, Li J, Wei F, ... ... Zhou Y, et al. The sequence and de novo assembly of the giant panda genome. Nature. 463: 311-7. PMID 20010809 DOI: 10.1038/Nature08696  0.335
2009 Huang S, Li R, Zhang Z, Li L, Gu X, Fan W, Lucas WJ, Wang X, Xie B, Ni P, Ren Y, Zhu H, Li J, Lin K, Jin W, ... ... Zhou Y, et al. The genome of the cucumber, Cucumis sativus L. Nature Genetics. 41: 1275-81. PMID 19881527 DOI: 10.1038/Ng.475  0.342
2009 Xia Q, Guo Y, Zhang Z, Li D, Xuan Z, Li Z, Dai F, Li Y, Cheng D, Li R, Cheng T, Jiang T, Becquet C, Xu X, Liu C, ... ... Zhou Y, et al. Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx). Science (New York, N.Y.). 326: 433-6. PMID 19713493 DOI: 10.1126/Science.1176620  0.332
2009 Xu T, Gu JL, Zhou Y, Du LF. Improving detection of differentially expressed gene sets by applying cluster enrichment analysis to Gene Ontology Bmc Bioinformatics. 10. PMID 19653916 DOI: 10.1186/1471-2105-10-240  0.307
2009 Brejovńa B, Vinař T, Chen Y, Wang S, Zhao G, Brown DG, Li M, Zhou Y. Finding genes in Schistosoma japonicum: Annotating novel genomes with help of extrinsic evidence Nucleic Acids Research. 37. PMID 19264800 DOI: 10.1093/Nar/Gkp052  0.346
2008 Wang J, Wang W, Li R, Li Y, Tian G, Goodman L, Fan W, Zhang J, Li J, Zhang J, Guo Y, Feng B, Li H, Lu Y, Fang X, ... ... Zhou Y, et al. The diploid genome sequence of an Asian individual. Nature. 456: 60-5. PMID 18987735 DOI: 10.1038/Nature07484  0.322
2008 Xu T, Du LF, Zhou Y. Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data Bmc Bioinformatics. 9. PMID 18986551 DOI: 10.1186/1471-2105-9-472  0.31
2008 Xu Z, Zhou Y, Li L, Zhou R, Xiao S, Wan Y, Zhang S, Wang K, Li W, Li L, Jin H, Kang M, Dalai B, Li T, Liu L, et al. Genome biology of Actinobacillus pleuropneumoniae JL03, an isolate of serotype 3 prevalent in China. Plos One. 3: e1450. PMID 18197260 DOI: 10.1371/Journal.Pone.0001450  0.362
2007 Zhang L, Tao L, Ye L, He L, Zhu YZ, Zhu YD, Zhou Y. Alternative Splicing and Expression Profile Analysis of Expressed Sequence Tags in Domestic Pig Genomics, Proteomics and Bioinformatics. 5: 25-34. PMID 17572361 DOI: 10.1016/S1672-0229(07)60011-4  0.332
2005 Yu J, Wang J, Lin W, Li S, Li H, Zhou J, Ni P, Dong W, Hu S, Zeng C, Zhang J, Zhang Y, Li R, Xu Z, Li S, ... ... Zhou Y, et al. The Genomes of Oryza sativa: a history of duplications. Plos Biology. 3: e38. PMID 15685292 DOI: 10.1371/Journal.Pbio.0030038  0.361
2004 Cui Y, Zhang X, Zhou Y, Yu H, Tao L, Zhang L, Zhou J, Zhuge Q, Cai Y, Huang M. Identification and expression analysis of EST-based genes in the bud of Lycoris longituba. Genomics, Proteomics & Bioinformatics. 2: 43-46. PMID 15629042 DOI: 10.1016/S1672-0229(04)02006-6  0.327
2004 Xia Q, Zhou Z, Lu C, Cheng D, Dai F, Li B, Zhao P, Zha X, Cheng T, Chai C, Pan G, Xu J, Liu C, Lin Y, Qian J, ... ... Zhou Y, et al. A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Science (New York, N.Y.). 306: 1937-40. PMID 15591204 DOI: 10.1126/Science.1102210  0.36
2003 Xu H, He L, Zhu Y, Huang W, Fang L, Tao L, Cai L, Zhang L, Zhou Y. EST pipeline system: detailed and automated EST data processing and mining Genomics Proteomics Bioinformatics. 1: 236-242. PMID 15629036 DOI: 10.1016/S1672-0229(03)01029-5  0.337
2003 Zhou Y, Tang J, Walker MG, Zhang X, Wang J, Hu S, Xu H, Deng Y, Dong J, Ye L, Lin L, Li J, Wang X, Xu H, Pan Y, et al. Gene identification and expression analysis of 86,136 Expressed Sequence Tags (EST) from the rice genome. Genomics, Proteomics & Bioinformatics. 1: 26-42. PMID 15626331 DOI: 10.1016/S1672-0229(03)01005-2  0.363
2003 Zhou Y, Zhou C, Ye L, Dong J, Xu H, Cai L, Zhang L, Wei L. Database and analyses of known alternatively spliced genes in plants. Genomics. 82: 584-95. PMID 14611800 DOI: 10.1016/S0888-7543(03)00204-0  0.321
2002 Yu J, Hu S, Wang J, Wong GK, Li S, Liu B, Deng Y, Dai L, Zhou Y, Zhang X, Cao M, Liu J, Sun J, Tang J, Chen Y, et al. A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science (New York, N.Y.). 296: 79-92. PMID 11935017 DOI: 10.1126/Science.1068037  0.352
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