☰

Zhixi Tian - Publications

Affiliations: 
Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, Beijing, Beijing Shi, China 
Tree Info Similar researchers PubMed Report error

57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Chu L, Yang K, Chen C, Zhao B, Hou Y, Wang W, Zhao P, Wang K, Wang B, Xiao Y, Li Y, Li Y, Song Q, Liu B, Fan R, ... ... Tian Z, et al. Chromosome-level reference genome and resequencing of 322 accessions reveal evolution, genomic imprint and key agronomic traits in adzuki bean. Plant Biotechnology Journal. PMID 38497586 DOI: 10.1111/pbi.14337  0.474
2023 Liu Y, Yi C, Fan C, Liu Q, Liu S, Shen L, Zhang K, Huang Y, Liu C, Wang Y, Tian Z, Han F. Pan-centromere reveals widespread centromere repositioning of soybean genomes. Proceedings of the National Academy of Sciences of the United States of America. 120: e2310177120. PMID 37816061 DOI: 10.1073/pnas.2310177120  0.395
2023 Ni L, Tian Z. Toward -regulation in soybean: a 3D genome scope. Molecular Breeding : New Strategies in Plant Improvement. 43: 28. PMID 37313524 DOI: 10.1007/s11032-023-01374-4  0.367
2023 Ni L, Liu Y, Ma X, Liu T, Yang X, Wang Z, Liang Q, Liu S, Zhang M, Wang Z, Shen Y, Tian Z. Pan-3D genome analysis reveals structural and functional differentiation of soybean genomes. Genome Biology. 24: 12. PMID 36658660 DOI: 10.1186/s13059-023-02854-8  0.411
2022 Shi J, Tian Z, Lai J, Huang X. Plant pan-genomics and its applications. Molecular Plant. PMID 36523157 DOI: 10.1016/j.molp.2022.12.009  0.443
2022 Liang Q, Chen L, Yang X, Yang H, Liu S, Kou K, Fan L, Zhang Z, Duan Z, Yuan Y, Liang S, Liu Y, Lu X, Zhou G, Zhang M, ... ... Tian Z, et al. Natural variation of Dt2 determines branching in soybean. Nature Communications. 13: 6429. PMID 36307423 DOI: 10.1038/s41467-022-34153-4  0.381
2022 Tong X, Han MJ, Lu K, Tai S, Liang S, Liu Y, Hu H, Shen J, Long A, Zhan C, Ding X, Liu S, Gao Q, Zhang B, Zhou L, ... ... Tian Z, et al. High-resolution silkworm pan-genome provides genetic insights into artificial selection and ecological adaptation. Nature Communications. 13: 5619. PMID 36153338 DOI: 10.1038/s41467-022-33366-x  0.472
2022 Liu Y, Tian Z. Super graph-based pan-genome: Bringing rice functional genomic study into a new dawn. Molecular Plant. PMID 35841149 DOI: 10.1016/j.molp.2022.07.005  0.335
2022 Xia Z, Zhai H, Zhang Y, Wang Y, Wang L, Xu K, Wu H, Zhu J, Jiao S, Wan Z, Zhu X, Gao Y, Liu Y, Fan R, Wu S, ... ... Tian Z, et al. QNE1 is a key flowering regulator determining the length of the vegetative period in soybean cultivars. Science China. Life Sciences. PMID 35802303 DOI: 10.1007/s11427-022-2117-x  0.351
2022 Duan Z, Zhang M, Zhang Z, Liang S, Fan L, Yang X, Yuan Y, Pan Y, Zhou G, Liu S, Tian Z. Natural allelic variation of GmST05 controlling seed size and quality in soybean. Plant Biotechnology Journal. PMID 35642379 DOI: 10.1111/pbi.13865  0.336
2022 Hu D, Li X, Yang Z, Liu S, Hao D, Chao M, Zhang J, Yang H, Su X, Jiang M, Lu S, Zhang D, Wang L, Kan G, Wang H, ... ... Tian Z, et al. Downregulation of a gibberellin 3β-hydroxylase enhances photosynthesis and increases seed yield in soybean. The New Phytologist. PMID 35396723 DOI: 10.1111/nph.18153  0.371
2021 Zhang M, Liu S, Wang Z, Yuan Y, Zhang Z, Liang Q, Yang X, Duan Z, Liu Y, Kong F, Liu B, Ren B, Tian Z. Progress in Soybean Functional Genomics over the Past Decade. Plant Biotechnology Journal. PMID 34388296 DOI: 10.1111/pbi.13682  0.61
2021 Yu H, Lin T, Meng X, Du H, Zhang J, Liu G, Chen M, Jing Y, Kou L, Li X, Gao Q, Liang Y, Liu X, Fan Z, Liang Y, ... ... Tian Z, et al. A route to de novo domestication of wild allotetraploid rice. Cell. PMID 33539781 DOI: 10.1016/j.cell.2021.01.013  0.389
2020 Liu Y, Tian Z. From one linear genome to a graph-based pan-genome: a new era for genomics. Science China. Life Sciences. 63: 1938-1941. PMID 32902773 DOI: 10.1007/s11427-020-1808-0  0.33
2020 Qi Z, Song J, Zhang K, Liu S, Tian X, Wang Y, Fang Y, Li X, Wang J, Yang C, Jiang S, Sun X, Tian Z, Li W, Ning H. Identification of QTNs Controlling 100-Seed Weight in Soybean Using Multilocus Genome-Wide Association Studies. Frontiers in Genetics. 11: 689. PMID 32765581 DOI: 10.3389/fgene.2020.00689  0.326
2020 Liu Y, Du H, Li P, Shen Y, Peng H, Liu S, Zhou GA, Zhang H, Liu Z, Shi M, Huang X, Li Y, Zhang M, Wang Z, Zhu B, ... ... Tian Z, et al. Pan-Genome of Wild and Cultivated Soybeans. Cell. PMID 32553274 DOI: 10.1016/j.cell.2020.05.023  0.437
2020 Lu S, Dong L, Fang C, Liu S, Kong L, Cheng Q, Chen L, Su T, Nan H, Zhang D, Zhang L, Wang Z, Yang Y, Yu D, Liu X, ... ... Tian Z, et al. Stepwise selection on homeologous PRR genes controlling flowering and maturity during soybean domestication. Nature Genetics. PMID 32231277 DOI: 10.1038/s41588-020-0604-7  0.366
2020 Fang Y, Liu S, Dong Q, Zhang K, Tian Z, Li X, Li W, Qi Z, Wang Y, Tian X, Song J, Wang J, Yang C, Jiang S, Li WX, et al. Linkage Analysis and Multi-Locus Genome-Wide Association Studies Identify QTNs Controlling Soybean Plant Height. Frontiers in Plant Science. 11: 9. PMID 32117360 DOI: 10.3389/fpls.2020.00009  0.381
2020 Song J, Sun X, Zhang K, Liu S, Wang J, Yang C, Jiang S, Siyal M, Li X, Qi Z, Wang Y, Tian X, Fang Y, Tian Z, Li W, et al. Identification of QTL and genes for pod number in soybean by linkage analysis and genome-wide association studies Molecular Breeding. 40. DOI: 10.1007/s11032-020-01140-w  0.438
2019 Shen Y, Du H, Liu Y, Ni L, Wang Z, Liang C, Tian Z. Update soybean Zhonghuang 13 genome to a golden reference. Science China. Life Sciences. PMID 31444683 DOI: 10.1007/s11427-019-9822-2  0.377
2019 Dong X, Wang Z, Tian L, Zhang Y, Qi D, Huo H, Xu J, Li Z, Liao R, Shi M, Ali WS, Liu C, Zhang S, Tian Z, Cao Y. De novo assembly of a wild pear (Pyrus betuleafolia) genome. Plant Biotechnology Journal. PMID 31368610 DOI: 10.1111/pbi.13226  0.458
2019 Chen E, Huang X, Tian Z, Wing RA, Han B. The Genomics of Species Provides Insights into Rice Domestication and Heterosis. Annual Review of Plant Biology. 70: 639-665. PMID 31035826 DOI: 10.1146/Annurev-Arplant-050718-100320  0.429
2019 Liu W, Chen L, Zhang S, Hu F, Wang Z, Lyu J, Wang B, Xiang H, Zhao R, Tian Z, Ge S, Wang W. Decrease of gene expression diversity during domestication of animals and plants. Bmc Evolutionary Biology. 19: 19. PMID 30634914 DOI: 10.1186/S12862-018-1340-9  0.318
2018 Zhang K, Liu S, Li W, Liu S, Li X, Fang Y, Zhang J, Wang Y, Xu S, Zhang J, Song J, Qi Z, Tian X, Tian Z, Li WX, et al. Identification of QTNs Controlling Seed Protein Content in Soybean Using Multi-Locus Genome-Wide Association Studies. Frontiers in Plant Science. 9: 1690. PMID 30519252 DOI: 10.3389/fpls.2018.01690  0.311
2018 Wang M, Li W, Fang C, Xu F, Liu Y, Wang Z, Yang R, Zhang M, Liu S, Lu S, Lin T, Tang J, Wang Y, Wang H, Lin H, ... ... Tian Z, et al. Parallel selection on a dormancy gene during domestication of crops from multiple families. Nature Genetics. PMID 30250128 DOI: 10.1038/s41588-018-0229-2  0.349
2018 Shen Y, Liu J, Geng H, Zhang J, Liu Y, Zhang H, Xing S, Du J, Ma S, Tian Z. De novo assembly of a Chinese soybean genome. Science China. Life Sciences. PMID 30062469 DOI: 10.1007/S11427-018-9360-0  0.46
2018 Zhang D, Sun L, Li S, Wang W, Ding Y, Swarm SA, Li L, Wang X, Tang X, Zhang Z, Tian Z, Brown PJ, Cai C, Nelson RL, Ma J. Elevation of soybean seed oil content through selection for seed coat shininess. Nature Plants. PMID 29292374 DOI: 10.1038/S41477-017-0084-7  0.575
2017 Fang C, Ma Y, Wu S, Liu Z, Wang Z, Yang R, Hu G, Zhou Z, Yu H, Zhang M, Pan Y, Zhou G, Ren H, Du W, Yan H, ... ... Tian Z, et al. Genome-wide association studies dissect the genetic networks underlying agronomical traits in soybean. Genome Biology. 18: 161. PMID 28838319 DOI: 10.1186/S13059-017-1289-9  0.315
2017 Chu S, Wang J, Zhu Y, Liu S, Zhou X, Zhang H, Wang CE, Yang W, Tian Z, Cheng H, Yu D. An R2R3-type MYB transcription factor, GmMYB29, regulates isoflavone biosynthesis in soybean. Plos Genetics. 13: e1006770. PMID 28489859 DOI: 10.1371/journal.pgen.1006770  0.391
2016 Cao K, Zhou Z, Wang Q, Guo J, Zhao P, Zhu G, Fang W, Chen C, Wang X, Wang X, Tian Z, Wang L. Genome-wide association study of 12 agronomic traits in peach. Nature Communications. 7: 13246. PMID 27824331 DOI: 10.1038/ncomms13246  0.427
2016 Li Q, Fang C, Duan Z, Liu Y, Qin H, Zhang J, Sun P, Li W, Wang G, Tian Z. Functional conservation and divergence of GmCHLI genes in polyploid soybean. The Plant Journal : For Cell and Molecular Biology. PMID 27459730 DOI: 10.1111/Tpj.13282  0.438
2016 Takeshima R, Hayashi T, Zhu J, Zhao C, Xu M, Yamaguchi N, Sayama T, Ishimoto M, Kong L, Shi X, Liu B, Tian Z, Yamada T, Kong F, Abe J. A soybean quantitative trait locus that promotes flowering under long days is identified as FT5a, a FLOWERING LOCUS T ortholog. Journal of Experimental Botany. PMID 27422993 DOI: 10.1093/Jxb/Erw283  0.34
2015 Yang K, Tian Z, Chen C, Luo L, Zhao B, Wang Z, Yu L, Li Y, Sun Y, Li W, Chen Y, Li Y, Zhang Y, Ai D, Zhao J, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proceedings of the National Academy of Sciences of the United States of America. PMID 26460024 DOI: 10.1073/Pnas.1420949112  0.477
2015 Yang K, Tian Z, Chen C, Luo L, Zhao B, Wang Z, Yu L, Li Y, Sun Y, Li W, Chen Y, Li Y, Zhang Y, Ai D, Zhao J, et al. Genome sequencing of adzuki bean (Vigna angularis) provides insight into high starch and low fat accumulation and domestication. Proceedings of the National Academy of Sciences of the United States of America. PMID 26460024 DOI: 10.1073/Pnas.1420949112  0.477
2015 Wang Z, Tian Z. Genomics progress will facilitate molecular breeding in soybean. Science China. Life Sciences. 58: 813-5. PMID 26187410 DOI: 10.1007/s11427-015-4908-2  0.355
2015 Wang Z, Tian Z. Genomics progress will facilitate molecular breeding in soybean. Science China. Life Sciences. 58: 813-5. PMID 26187410 DOI: 10.1007/s11427-015-4908-2  0.355
2015 Wang Z, Zhou Z, Liu Y, Liu T, Li Q, Ji Y, Li C, Fang C, Wang M, Wu M, Shen Y, Tang T, Ma J, Tian Z. Functional evolution of phosphatidylethanolamine binding proteins in soybean and Arabidopsis. The Plant Cell. 27: 323-36. PMID 25663621 DOI: 10.1105/tpc.114.135103  0.639
2015 Zhou Z, Jiang Y, Wang Z, Gou Z, Lyu J, Li W, Yu Y, Shu L, Zhao Y, Ma Y, Fang C, Shen Y, Liu T, Li C, Li Q, ... ... Tian Z, et al. Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean. Nature Biotechnology. 33: 408-14. PMID 25643055 DOI: 10.1038/nbt.3096  0.401
2015 Zhou Z, Jiang Y, Wang Z, Gou Z, Lyu J, Li W, Yu Y, Shu L, Zhao Y, Ma Y, Fang C, Shen Y, Liu T, Li C, Li Q, ... ... Tian Z, et al. Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean. Nature Biotechnology. 33: 408-14. PMID 25643055 DOI: 10.1038/nbt.3096  0.401
2015 Wang Z, Tian ZX. Genomics progress will facilitate molecular breeding in soybean Science China Life Sciences. 58: 813-815. DOI: 10.1007/s11427-015-4908-2  0.355
2014 Ping J, Liu Y, Sun L, Zhao M, Li Y, She M, Sui Y, Lin F, Liu X, Tang Z, Nguyen H, Tian Z, Qiu L, Nelson RL, Clemente TE, et al. Dt2 is a gain-of-function MADS-domain factor gene that specifies semideterminacy in soybean. The Plant Cell. 26: 2831-42. PMID 25005919 DOI: 10.1105/tpc.114.126938  0.639
2014 Shen Y, Zhou Z, Wang Z, Li W, Fang C, Wu M, Ma Y, Liu T, Kong LA, Peng DL, Tian Z. Global dissection of alternative splicing in paleopolyploid soybean. The Plant Cell. 26: 996-1008. PMID 24681622 DOI: 10.1105/tpc.114.122739  0.448
2014 Shen Y, Zhou Z, Wang Z, Li W, Fang C, Wu M, Ma Y, Liu T, Kong LA, Peng DL, Tian Z. Global dissection of alternative splicing in paleopolyploid soybean. The Plant Cell. 26: 996-1008. PMID 24681622 DOI: 10.1105/tpc.114.122739  0.448
2014 Fang C, Li C, Li W, Wang Z, Zhou Z, Shen Y, Wu M, Wu Y, Li G, Kong LA, Liu C, Jackson SA, Tian Z. Concerted evolution of D1 and D2 to regulate chlorophyll degradation in soybean. The Plant Journal : For Cell and Molecular Biology. 77: 700-12. PMID 24372721 DOI: 10.1111/tpj.12419  0.365
2014 Fang C, Li C, Li W, Wang Z, Zhou Z, Shen Y, Wu M, Wu Y, Li G, Kong LA, Liu C, Jackson SA, Tian Z. Concerted evolution of D1 and D2 to regulate chlorophyll degradation in soybean. The Plant Journal : For Cell and Molecular Biology. 77: 700-12. PMID 24372721 DOI: 10.1111/tpj.12419  0.365
2014 Zhang F, Shen Y, Sun S, Guo J, Li C, Wu C, Li Q, Nian H, Huang X, Tian Z, Han T. Genome-wide expression analysis in a dwarf soybean mutant Plant Genetic Resources. 12: S70-S73. DOI: 10.1017/S1479262114000306  0.378
2012 Tian Z, Zhao M, She M, Du J, Cannon SB, Liu X, Xu X, Qi X, Li MW, Lam HM, Ma J. Genome-wide characterization of nonreference transposons reveals evolutionary propensities of transposons in soybean. The Plant Cell. 24: 4422-36. PMID 23175746 DOI: 10.1105/Tpc.112.103630  0.698
2012 Du J, Tian Z, Sui Y, Zhao M, Song Q, Cannon SB, Cregan P, Ma J. Pericentromeric effects shape the patterns of divergence, retention, and expression of duplicated genes in the paleopolyploid soybean. The Plant Cell. 24: 21-32. PMID 22227891 DOI: 10.1105/Tpc.111.092759  0.683
2011 Tian Z, Yu Y, Lin F, Yu Y, Sanmiguel PJ, Wing RA, McCouch SR, Ma J, Jackson SA. Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and intraspecific comparison and population analysis. Bmc Genomics. 12: 142. PMID 21385395 DOI: 10.1186/1471-2164-12-142  0.685
2010 Du J, Tian Z, Hans CS, Laten HM, Cannon SB, Jackson SA, Shoemaker RC, Ma J. Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison. The Plant Journal : For Cell and Molecular Biology. 63: 584-98. PMID 20525006 DOI: 10.1111/J.1365-313X.2010.04263.X  0.691
2010 Tian Z, Wang X, Lee R, Li Y, Specht JE, Nelson RL, McClean PE, Qiu L, Ma J. Artificial selection for determinate growth habit in soybean. Proceedings of the National Academy of Sciences of the United States of America. 107: 8563-8. PMID 20421496 DOI: 10.1073/pnas.1000088107  0.655
2010 Du J, Grant D, Tian Z, Nelson RT, Zhu L, Shoemaker RC, Ma J. SoyTEdb: a comprehensive database of transposable elements in the soybean genome. Bmc Genomics. 11: 113. PMID 20163715 DOI: 10.1186/1471-2164-11-113  0.712
2010 Du J, Tian Z, Bowen NJ, Schmutz J, Shoemaker RC, Ma J. Bifurcation and enhancement of autonomous-nonautonomous retrotransposon partnership through LTR Swapping in soybean. The Plant Cell. 22: 48-61. PMID 20081112 DOI: 10.1105/Tpc.109.068775  0.67
2010 Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, Nelson W, Hyten DL, Song Q, Thelen JJ, Cheng J, Xu D, Hellsten U, May GD, Yu Y, Sakurai T, ... ... Tian Z, et al. Genome sequence of the palaeopolyploid soybean. Nature. 463: 178-83. PMID 20075913 DOI: 10.1038/Nature08670  0.715
2010 Schmutz J, Cannon SB, Schlueter J, Ma J, Mitros T, Nelson W, Hyten DL, Song Q, Thelen JJ, Cheng J, Xu D, Hellsten U, May GD, Yu Y, Sakurai T, ... ... Tian Z, et al. Erratum: Genome sequence of the palaeopolyploid soybean Nature. 465: 120-120. DOI: 10.1038/Nature08957  0.606
2009 Tian Z, Rizzon C, Du J, Zhu L, Bennetzen JL, Jackson SA, Gaut BS, Ma J. Do genetic recombination and gene density shape the pattern of DNA elimination in rice long terminal repeat retrotransposons? Genome Research. 19: 2221-30. PMID 19789376 DOI: 10.1101/Gr.083899.108  0.734
2009 Wu J, Fujisawa M, Tian Z, Yamagata H, Kamiya K, Shibata M, Hosokawa S, Ito Y, Hamada M, Katagiri S, Kurita K, Yamamoto M, Kikuta A, Machita K, Karasawa W, et al. Comparative analysis of complete orthologous centromeres from two subspecies of rice reveals rapid variation of centromere organization and structure. The Plant Journal : For Cell and Molecular Biology. 60: 805-19. PMID 19702669 DOI: 10.1111/j.1365-313X.2009.04002.x  0.691
Show low-probability matches.