Daniel P. Koenig, Ph.D.

2010 Genetics University of California, Davis, Davis, CA 
Genetics, Botany Biology
"Daniel Koenig"
Cross-listing: Evolution Tree


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Neelima Roy Sinha grad student 2010 UC Davis
 (Investigation of the genetic and molecular mechanisms patterning leaf morphogenesis.)
Detlef Weigel post-doc UC Riverside
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Koenig D, Hagmann J, Li R, et al. (2019) Author response: Long-term balancing selection drives evolution of immunity genes in Capsella Elife
Seymour DK, Chae E, Grimm DG, et al. (2016) Genetic architecture of nonadditive inheritance in Arabidopsis thaliana hybrids. Proceedings of the National Academy of Sciences of the United States of America
Rawat V, Abdelsamad A, Pietzenuk B, et al. (2015) Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data. Plos One. 10: e0137391
Koenig D, Weigel D. (2015) Beyond the thale: comparative genomics and genetics of Arabidopsis relatives. Nature Reviews. Genetics. 16: 285-98
Seymour DK, Koenig D, Hagmann J, et al. (2014) Evolution of DNA methylation patterns in the Brassicaceae is driven by differences in genome organization. Plos Genetics. 10: e1004785
Bolger A, Scossa F, Bolger ME, et al. (2014) The genome of the stress-tolerant wild tomato species Solanum pennellii. Nature Genetics. 46: 1034-8
Agren JÃ…, Wang W, Koenig D, et al. (2014) Mating system shifts and transposable element evolution in the plant genus Capsella. Bmc Genomics. 15: 602
Koenig D, Jiménez-Gómez JM, Kimura S, et al. (2013) Comparative transcriptomics reveals patterns of selection in domesticated and wild tomato. Proceedings of the National Academy of Sciences of the United States of America. 110: E2655-62
Grimm D, Hagmann J, Koenig D, et al. (2013) Accurate indel prediction using paired-end short reads. Bmc Genomics. 14: 132
Manavella PA, Koenig D, Rubio-Somoza I, et al. (2013) Tissue-specific silencing of Arabidopsis SU(VAR)3-9 HOMOLOG8 by miR171a. Plant Physiology. 161: 805-12
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