Philip N. Benfey, Ph.D.

Affiliations: 
Duke University, Durham, NC 
Area:
Developmental Biology, Plant Biology
Website:
http://sites.duke.edu/benfey/
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"Philip Benfey"

Parents

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Philip Leder grad student 1986 Harvard (Neurotree)
Nam-Hai Chua post-doc 1987-1990 Rockefeller

Children

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Hongchang Cui grad student Florida State
Sophie Fang grad student Sun Yat-sen University
Hidehiro Fukaki grad student Kobe University
Song Li grad student Virginia Tech
Terri Long grad student NCSU
Jocelyn Malamy grad student Chicago
Molly McGraw grad student Oregon State
Miguel Moreno-Risueno grad student Center for Plant Biotechology and Genomics
Trevor M. Nolan grad student Duke
Jaimie Van Norman grad student UC Riverside
Kenneth D. Birnbaum grad student 2000 NYU
Jun Lim grad student 2001 NYU
Gary C. Schindelman grad student 2001 NYU
Giovanni Sena grad student 2003 NYU
Mitchell P. Levesque grad student 2005 Duke (Computational Biology Tree)
Tal Nawy grad student 2005 NYU
Juliette Colinas grad student 2006 Duke (Computational Biology Tree)
David A. Orlando grad student 2009 (Computational Biology Tree)
Natalie W. Breakfield grad student 2011 (Computational Biology Tree)
Kenneth Birnbaum post-doc NYU (Evolution Tree)
Wolfgang Busch post-doc Duke
José R. Dinneny post-doc Duke
Kim Gallagher post-doc Penn
Yrjo Helariutta post-doc Univ. Helsinki
Anjali Iyer-Pascuzzi post-doc Purdue
Rosangela Sozzani post-doc NCSU
Christopher Topp post-doc Donald Danforth Plant Science Center
Ji-Young Lee post-doc 2003-2007 Seoul National University
Siobhan Brady post-doc 2009 Duke

Collaborators

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Alexander Bucksch collaborator (Computational Biology Tree)
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Publications

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Hsu CW, Shahan R, Nolan TM, et al. (2022) Protocol for fast scRNA-seq raw data processing using scKB and non-arbitrary quality control with COPILOT. Star Protocols. 3: 101729
Zhu M, Taylor IW, Benfey PN. (2022) Single-cell genomics revolutionizes plant development studies across scales. Development (Cambridge, England). 149
Shahan R, Hsu CW, Nolan TM, et al. (2022) A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants. Developmental Cell
Contreras-López O, Vidal EA, Riveras E, et al. (2022) Spatiotemporal analysis identifies ABF2 and ABF3 as key hubs of endodermal response to nitrate. Proceedings of the National Academy of Sciences of the United States of America. 119
Dickinson AJ, Zhang J, Luciano M, et al. (2021) A plant lipocalin promotes retinal-mediated oscillatory lateral root initiation. Science (New York, N.Y.)
Shahan R, Nolan TM, Benfey PN. (2021) Single-cell analysis of cell identity in the Arabidopsis root apical meristem: insights and opportunities. Journal of Experimental Botany
Shao Y, Lehner KR, Zhou H, et al. (2021) VAP-RELATED SUPPRESSORS OF TOO MANY MOUTHS (VST) family proteins are regulators of root system architecture. Plant Physiology. 185: 457-468
Taylor I, Lehner K, McCaskey E, et al. (2021) Mechanism and function of root circumnutation. Proceedings of the National Academy of Sciences of the United States of America. 118
Goldy C, Pedroza-Garcia JA, Breakfield N, et al. (2021) The GRAS-type SCL28 transcription factor controls the mitotic cell cycle and division plane orientation. Proceedings of the National Academy of Sciences of the United States of America. 118
Perianez-Rodriguez J, Rodriguez M, Marconi M, et al. (2021) An auxin-regulable oscillatory circuit drives the root clock in . Science Advances. 7
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