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| Li J, Tietz S, Cruz JA, et al. (2018) Photometric screens identified Arabidopsis peroxisome proteins that impact photosynthesis under dynamic light conditions. The Plant Journal : For Cell and Molecular Biology |
| Peng J, Lu J, Shang X, et al. (2017) Identifying consistent disease subnetworks using DNet. Methods (San Diego, Calif.) |
| Yang Y, Xu L, Feng Z, et al. (2017) PhenoCurve: capturing dynamic phenotype-environment relationships using phenomics data. Bioinformatics (Oxford, England). 33: 1370-1378 |
| Peng J, Bai K, Shang X, et al. (2017) Predicting disease-related genes using integrated biomedical networks. Bmc Genomics. 18: 1043 |
| Penga J, Wang T, Huc J, et al. (2016) Constructing Networks of Organelle Functional Modules in Arabidopsis. Current Genomics. 17: 427-438 |
| Peng J, Wang T, Wang J, et al. (2015) Extending Gene Ontology with Gene Association Networks. Bioinformatics (Oxford, England) |
| Xin XF, Nomura K, Ding X, et al. (2015) Pseudomonas syringae effector AvrE localizes to the host plasma membrane and down-regulates the expression of the NDR/HIN1-like 13 gene required for antibacterial immunity in Arabidopsis. Plant Physiology |
| Peng J, Uygun S, Kim T, et al. (2015) Measuring semantic similarities by combining gene ontology annotations and gene co-function networks. Bmc Bioinformatics. 16: 44 |
| Peng J, Li H, Jiang Q, et al. (2014) An integrative approach for measuring semantic similarities using gene ontology. Bmc Systems Biology. 8: S8 |
| Panchy N, Wu G, Newton L, et al. (2014) Prevalence, evolution, and cis-regulation of diel transcription in Chlamydomonas reinhardtii. G3 (Bethesda, Md.). 4: 2461-71 |