Joseph R. Ecker, Ph.D.
Affiliations: | HHMI-The Salk Institute for Biological Studies |
Area:
epigenetics, molecular geneticsWebsite:
http://www.salk.edu/faculty/ecker.htmlGoogle:
"Joseph Ecker"Bio:
http://www.hhmi.org/research/hhmi-gbmf/ecker_bio.html
Parents
Sign in to add mentor| Richard W. Hyman | grad student | 1978-1982 | Penn State College of Medicine (Chemistry Tree) |
| Ronald W. Davis | post-doc | 1983-1986 | Stanford Medical School (Evolution Tree) |
Children
Sign in to add trainee| Ammar Naqvi | research assistant | 2006-2008 | (Chemistry Tree) |
| José Alonso | grad student | ||
| Justin Borevitz | grad student | ||
| Gregg Roman | grad student | (Neurotree) | |
| Anna Stepanova | grad student | 2001 | Penn |
| Ramlah B. Nehring | grad student | 2007 | UCSD |
| Katherine N. Chang | grad student | 2011 | UCSD |
| Qian Peng | grad student | 2012 | UCSD (Neurotree) |
| Joseph John Kieber | post-doc | ||
| Sarah J. Liljegren | post-doc | ||
| Ryan Lister | post-doc | HHMI-The Salk Institute for Biological Studies | |
| Hong Qiao | post-doc | ||
| Robert J. Schmitz | post-doc | ||
| Mathew G. Lewsey | post-doc | 2010-2016 | Salk Institute |
| Chongyuan Luo | post-doc | 2012-2019 | Salk Institute |
BETA: Related publications
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Publications
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| Lee DS, Luo C, Zhou J, et al. (2019) Simultaneous profiling of 3D genome structure and DNA methylation in single human cells. Nature Methods |
| Zander M, Willige BC, He Y, et al. (2019) Epigenetic silencing of a multifunctional plant stress regulator. Elife. 8 |
| Jupe F, Rivkin AC, Michael TP, et al. (2019) The complex architecture and epigenomic impact of plant T-DNA insertions. Plos Genetics. 15: e1007819 |
| Luo C, Lee QY, Wapinski O, et al. (2019) Global DNA methylation remodeling during direct reprogramming of fibroblasts to neurons. Elife. 8 |
| Hrit J, Goodrich L, Li C, et al. (2018) OGT binds a conserved C-terminal domain of TET1 to regulate TET1 activity and function in development. Elife. 7 |
| Luo C, Hajkova P, Ecker JR. (2018) Dynamic DNA methylation: In the right place at the right time. Science (New York, N.Y.). 361: 1336-1340 |
| Luo C, Rivkin A, Zhou J, et al. (2018) Robust single-cell DNA methylome profiling with snmC-seq2. Nature Communications. 9: 3824 |
| Sabbagh MF, Heng JS, Luo C, et al. (2018) Transcriptional and epigenomic landscapes of CNS and non-CNS vascular endothelial cells. Elife. 7 |
| Yazaki J, Galli M, Kim AY, et al. (2018) Profiling Interactome Networks with the HaloTag-NAPPA In Situ Protein Array. Current Protocols in Plant Biology. e20071 |
| Michael TP, Jupe F, Bemm F, et al. (2018) High contiguity Arabidopsis thaliana genome assembly with a single nanopore flow cell. Nature Communications. 9: 541 |