Thomas D. Niehaus, Ph.D. - Publications

Affiliations: 
2011 Plant and Soil Sciences University of Kentucky, Lexington, KY 
Area:
Botany Biology, Molecular Biology, Biochemistry, Plant Culture Agriculture

27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Zmuda AJ, Kang X, Wissbroecker KB, Freund Saxhaug K, Costa KC, Hegeman AD, Niehaus TD. A universal metabolite repair enzyme removes a strong inhibitor of the TCA cycle. Nature Communications. 15: 846. PMID 38287013 DOI: 10.1038/s41467-024-45134-0  0.348
2022 Zmuda AJ, Niehaus TD. Systems and strategies for plant protein expression. Methods in Enzymology. 680: 3-34. PMID 36710015 DOI: 10.1016/bs.mie.2022.08.002  0.336
2022 Hillmann KB, Goethel ME, Erickson NA, Niehaus TD. Identification of a S-(2-succino)cysteine breakdown pathway that uses a novel S-(2-succino) lyase. The Journal of Biological Chemistry. 102639. PMID 36309089 DOI: 10.1016/j.jbc.2022.102639  0.371
2020 Niehaus TD, Hillmann KB. Enzyme promiscuity, metabolite damage, and metabolite damage control systems of the tricarboxylic acid cycle. The Febs Journal. PMID 32149453 DOI: 10.1111/Febs.15284  0.326
2019 Niehaus TD, Patterson JA, Alexander DC, Folz JS, Pyc M, MacTavish BS, Bruner SD, Mullen RT, Fiehn O, Hanson AD. The metabolite repair enzyme Nit1 is a dual-targeted amidase that disposes of damaged glutathione in . The Biochemical Journal. PMID 30692244 DOI: 10.1042/Bcj20180931  0.399
2018 Hanson AD, Amthor JS, Sun J, Niehaus TD, Gregory JF, Bruner SD, Ding Y. Redesigning thiamin synthesis: Prospects and potential payoffs. Plant Science : An International Journal of Experimental Plant Biology. 273: 92-99. PMID 29907313 DOI: 10.1016/J.Plantsci.2018.01.019  0.346
2018 Paerl RW, Bertrand EM, Rowland E, Schatt P, Mehiri M, Niehaus TD, Hanson AD, Riemann L, Yves-Bouget F. Carboxythiazole is a key microbial nutrient currency and critical component of thiamin biosynthesis. Scientific Reports. 8: 5940. PMID 29654239 DOI: 10.1038/S41598-018-24321-2  0.417
2018 Niehaus TD, Elbadawi-Sidhu M, Huang L, Prunetti L, Gregory JF, de Crécy-Lagard V, Fiehn O, Hanson AD. Evidence that the metabolite repair enzyme NAD(P)HX epimerase has a moonlighting function. Bioscience Reports. PMID 29654173 DOI: 10.1042/Bsr20180223  0.428
2018 Niehaus TD, Folz J, McCarty DR, Cooper AJL, Moraga Amador D, Fiehn O, Hanson AD. Identification of a metabolic disposal route for the oncometabolite-(2-succino)cysteine in. The Journal of Biological Chemistry. PMID 29626092 DOI: 10.1074/Jbc.Ra118.002925  0.379
2017 Niehaus TD, Elbadawi-Sidhu M, de Crécy-Lagard V, Fiehn O, Hanson AD. Discovery of a widespread prokaryotic 5-oxoprolinase that was hiding in plain sight. The Journal of Biological Chemistry. PMID 28830929 DOI: 10.1074/Jbc.M117.805028  0.485
2017 Browne DR, Jenkins J, Schmutz J, Shu S, Barry K, Grimwood J, Chiniquy J, Sharma A, Niehaus TD, Weiss TL, Koppisch AT, Fox DT, Dhungana S, Okada S, Chappell J, et al. Draft Nuclear Genome Sequence of the Liquid Hydrocarbon-Accumulating Green Microalga Botryococcus braunii Race B (Showa). Genome Announcements. 5. PMID 28428306 DOI: 10.1128/Genomea.00215-17  0.641
2016 Mimura M, Zallot R, Niehaus TD, Hasnain G, Gidda SK, Nguyen TN, Anderson EM, Mullen RT, Brown G, Yakunin AF, de Crécy-Lagard V, Gregory JF, McCarty DR, Hanson AD. Arabidopsis TH2 Encodes the Orphan Enzyme Thiamin Monophosphate Phosphatase. The Plant Cell. PMID 27677881 DOI: 10.1105/Tpc.16.00600  0.427
2016 Henry CS, Lerma-Ortiz C, Gerdes SY, Mullen JD, Colasanti R, Zhukov A, Frelin O, Thiaville JJ, Zallot R, Niehaus TD, Hasnain G, Conrad N, Hanson AD, de Crécy-Lagard V. Systematic identification and analysis of frequent gene fusion events in metabolic pathways. Bmc Genomics. 17: 473. PMID 27342196 DOI: 10.1186/S12864-016-2782-3  0.357
2016 Linscott KB, Niehaus TD, Zhuang X, Bell SA, Chappell J. Mapping a Kingdom-Specific Functional Domain of Squalene Synthase. Biochimica Et Biophysica Acta. PMID 27320012 DOI: 10.1016/J.Bbalip.2016.06.008  0.623
2016 Lerma-Ortiz C, Jeffryes JG, Cooper AJ, Niehaus TD, Thamm AM, Frelin O, Aunins T, Fiehn O, de Crécy-Lagard V, Henry CS, Hanson AD. 'Nothing of chemistry disappears in biology': the Top 30 damage-prone endogenous metabolites. Biochemical Society Transactions. 44: 961-71. PMID 27284066 DOI: 10.1042/Bst20160073  0.357
2015 Jeffryes JG, Colastani RL, Elbadawi-Sidhu M, Kind T, Niehaus TD, Broadbelt LJ, Hanson AD, Fiehn O, Tyo KE, Henry CS. MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics. Journal of Cheminformatics. 7: 44. PMID 26322134 DOI: 10.1186/S13321-015-0087-1  0.343
2015 Niehaus TD, Thamm AM, de Crécy-Lagard V, Hanson AD. Proteins of Unknown Biochemical Function: A Persistent Problem and a Roadmap to Help Overcome It. Plant Physiology. 169: 1436-42. PMID 26269542 DOI: 10.1104/Pp.15.00959  0.434
2015 Niehaus TD, Gerdes S, Hodge-Hanson K, Zhukov A, Cooper AJ, ElBadawi-Sidhu M, Fiehn O, Downs DM, Hanson AD. Genomic and experimental evidence for multiple metabolic functions in the RidA/YjgF/YER057c/UK114 (Rid) protein family. Bmc Genomics. 16: 382. PMID 25975565 DOI: 10.1186/S12864-015-1584-3  0.354
2014 Bell SA, Niehaus TD, Nybo SE, Chappell J. Structure-function mapping of key determinants for hydrocarbon biosynthesis by squalene and squalene synthase-like enzymes from the green alga Botryococcus braunii race B. Biochemistry. 53: 7570-81. PMID 25393512 DOI: 10.1021/Bi501264S  0.632
2014 Niehaus TD, Nguyen TN, Gidda SK, ElBadawi-Sidhu M, Lambrecht JA, McCarty DR, Downs DM, Cooper AJ, Fiehn O, Mullen RT, Hanson AD. Arabidopsis and maize RidA proteins preempt reactive enamine/imine damage to branched-chain amino acid biosynthesis in plastids. The Plant Cell. 26: 3010-22. PMID 25070638 DOI: 10.1105/Tpc.114.126854  0.33
2014 Seaver SMD, Gerdes S, Frelin O, Lerma-Ortiz C, Bradbury LMT, Zallot R, Hasnain G, Niehaus TD, El Yacoubi B, Pasternak S, Olson R, Pusch G, Overbeek R, Stevens R, De Crécy-Lagard V, et al. High-throughput comparison, functional annotation, and metabolic modeling of plant genomes using the PlantSEED resource Proceedings of the National Academy of Sciences of the United States of America. 111: 9645-9650. PMID 24927599 DOI: 10.1073/Pnas.1401329111  0.396
2014 Marbaix AY, Tyteca D, Niehaus TD, Hanson AD, Linster CL, Van Schaftingen E. Occurrence and subcellular distribution of the NADPHX repair system in mammals. The Biochemical Journal. 460: 49-58. PMID 24611804 DOI: 10.1042/Bj20131482  0.391
2014 Niehaus TD, Richardson LG, Gidda SK, ElBadawi-Sidhu M, Meissen JK, Mullen RT, Fiehn O, Hanson AD. Plants utilize a highly conserved system for repair of NADH and NADPH hydrates. Plant Physiology. 165: 52-61. PMID 24599492 DOI: 10.1104/Pp.114.236539  0.402
2014 Khatri W, Hendrix R, Niehaus T, Chappell J, Curtis WR. Hydrocarbon production in high density Botryococcus braunii race B continuous culture. Biotechnology and Bioengineering. 111: 493-503. PMID 24122424 DOI: 10.1002/Bit.25126  0.519
2013 Bradbury LMT, Niehaus TD, Hanson AD. Comparative genomics approaches to understanding and manipulating plant metabolism Current Opinion in Biotechnology. 24: 278-284. PMID 22898705 DOI: 10.1016/J.Copbio.2012.07.005  0.436
2012 Niehaus TD, Kinison S, Okada S, Yeo YS, Bell SA, Cui P, Devarenne TP, Chappell J. Functional identification of triterpene methyltransferases from Botryococcus braunii race B. The Journal of Biological Chemistry. 287: 8163-73. PMID 22241476 DOI: 10.1074/Jbc.M111.316059  0.674
2011 Niehaus TD, Okada S, Devarenne TP, Watt DS, Sviripa V, Chappell J. Identification of unique mechanisms for triterpene biosynthesis in Botryococcus braunii. Proceedings of the National Academy of Sciences of the United States of America. 108: 12260-5. PMID 21746901 DOI: 10.1073/Pnas.1106222108  0.689
Show low-probability matches.