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Mario Rivera - Publications

Affiliations: 
Oklahoma State University, Stillwater, OK, United States 
Area:
Analytical Chemistry, Biochemistry
Website:
https://chem.ku.edu/people/faculty/mrivera
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68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Soldano A, Yao H, Chandler JR, Rivera M. Inhibiting iron mobilization from bacterioferritin in impairs biofilm formation irrespective of environmental iron availability. Acs Infectious Diseases. PMID 31898890 DOI: 10.1021/Acsinfecdis.9B00398  0.349
2019 Punchi Hewage A, Yao H, Nammalwar B, Gnanasekaran KK, Lovell S, Bunce RA, Eshelman K, Phaniraj S, Lee M, Peterson BR, Battaile KP, Reitz AB, Rivera M. Small molecule inhibitors of the BfrB-Bfd interaction decrease Pseudomonas aeruginosa fitness and potentiate fluoroquinolone activity. Journal of the American Chemical Society. PMID 31038945 DOI: 10.2210/Pdb6Nli/Pdb  0.36
2018 Wijerathne H, Yao H, Wang Y, Lovell SW, Battaile KP, Rivera M. Bfd a New Class of [2Fe-2S]-Protein that Functions in Bacterial Iron Homeostasis Requires a Structural Anion Binding Site. Biochemistry. PMID 30183257 DOI: 10.2210/Pdb6E6R/Pdb  0.382
2017 Soldano A, Klinke S, Otero LH, Rivera M, Catalano-Dupuy DL, Ceccarelli EA. Structural and mutational analyses of the Leptospira interrogans virulence-related heme oxygenase provide insights into its catalytic mechanism. Plos One. 12: e0182535. PMID 28771589 DOI: 10.1371/Journal.Pone.0182535  0.382
2017 Eshelman K, Yao H, Punchi Hewage AN, Deay JJ, Chandler JR, Rivera M. Inhibiting the BfrB:Bfd interaction in Pseudomonas aeruginosa causes irreversible iron accumulation in bacterioferritin and iron deficiency in the bacterial cytosol. Metallomics : Integrated Biometal Science. PMID 28318006 DOI: 10.1039/C7Mt00042A  0.351
2017 Rivera M. Bacterioferritin: Structure, Dynamics, and Protein-Protein Interactions at Play in Iron Storage and Mobilization. Accounts of Chemical Research. PMID 28177216 DOI: 10.1021/Acs.Accounts.6B00514  0.39
2016 Kumar R, Qi Y, Matsumura H, Lovell SW, Yao H, Battaile KP, Im W, Moënne-Loccoz P, Rivera M. Replacing Arginine 33 for Alanine in the Hemophore HasA from Pseudomonas aeruginosa Causes Closure of the H32 Loop in the Apo-Protein. Biochemistry. PMID 27074415 DOI: 10.1021/Acs.Biochem.6B00239  0.339
2015 Wang Y, Yao H, Cheng Y, Lovell SW, Battaile KP, Middaugh CR, Rivera M. Characterization of the Bacterioferritin/Bacterioferritin Associated Ferredoxin (BfrB:Bfd) Protein-Protein Interaction in Solution and Determination of Binding Energy Hot Spots. Biochemistry. PMID 26368531 DOI: 10.1021/Acs.Biochem.5B00937  0.371
2015 Yao H, Rui H, Kumar R, Eshelman K, Lovell S, Battaile KP, Im W, Rivera M. Concerted motions networking pores and distant ferroxidase centers enable bacterioferritin function and iron traffic. Biochemistry. 54: 1611-27. PMID 25640193 DOI: 10.1021/Bi501255R  0.411
2014 Soldano A, Yao H, Rivera M, Ceccarelli EA, Catalano-Dupuy DL. Heme-iron utilization by Leptospira interrogans requires a heme oxygenase and a plastidic-type ferredoxin-NADP(+) reductase. Biochimica Et Biophysica Acta. 1840: 3208-17. PMID 25092651 DOI: 10.1016/J.Bbagen.2014.07.021  0.378
2014 Ruvinsky AM, Vakser IA, Rivera M. Local packing modulates diversity of iron pathways and cooperative behavior in eukaryotic and prokaryotic ferritins. The Journal of Chemical Physics. 140: 115104. PMID 24655206 DOI: 10.1063/1.4868229  0.31
2014 Kumar R, Matsumura H, Lovell S, Yao H, Rodríguez JC, Battaile KP, Moënne-Loccoz P, Rivera M. Replacing the axial ligand tyrosine 75 or its hydrogen bond partner histidine 83 minimally affects hemin acquisition by the hemophore HasAp from Pseudomonas aeruginosa. Biochemistry. 53: 2112-25. PMID 24625274 DOI: 10.1021/Bi500030P  0.383
2013 Benson DR, Rivera M. Heme uptake and metabolism in bacteria. Metal Ions in Life Sciences. 12: 279-332. PMID 23595676 DOI: 10.1007/978-94-007-5561-1_9  0.349
2013 Kumar R, Lovell S, Matsumura H, Battaile KP, Moënne-Loccoz P, Rivera M. The hemophore HasA from Yersinia pestis (HasAyp) coordinates hemin with a single residue, Tyr75, and with minimal conformational change. Biochemistry. 52: 2705-7. PMID 23578210 DOI: 10.1021/Bi400280Z  0.313
2012 Rui H, Rivera M, Im W. Protein dynamics and ion traffic in bacterioferritin. Biochemistry. 51: 9900-10. PMID 23167635 DOI: 10.1021/Bi3013388  0.379
2012 Yao H, Wang Y, Lovell S, Kumar R, Ruvinsky AM, Battaile KP, Vakser IA, Rivera M. The structure of the BfrB-Bfd complex reveals protein-protein interactions enabling iron release from bacterioferritin. Journal of the American Chemical Society. 134: 13470-81. PMID 22812654 DOI: 10.1021/Ja305180N  0.397
2011 Parthasarathy S, Altuve A, Terzyan S, Zhang X, Kuczera K, Rivera M, Benson DR. Accommodating a nonconservative internal mutation by water-mediated hydrogen bonding between β-sheet strands: a comparison of human and rat type B (mitochondrial) cytochrome b5. Biochemistry. 50: 5544-54. PMID 21574570 DOI: 10.1021/Bi2004729  0.318
2011 Yao H, Jepkorir G, Lovell S, Nama PV, Weeratunga S, Battaile KP, Rivera M. Two distinct ferritin-like molecules in Pseudomonas aeruginosa: the product of the bfrA gene is a bacterial ferritin (FtnA) and not a bacterioferritin (Bfr). Biochemistry. 50: 5236-48. PMID 21574546 DOI: 10.1021/Bi2004119  0.34
2010 Yukl ET, Jepkorir G, Alontaga AY, Pautsch L, Rodriguez JC, Rivera M, Moënne-Loccoz P. Kinetic and spectroscopic studies of hemin acquisition in the hemophore HasAp from Pseudomonas aeruginosa. Biochemistry. 49: 6646-54. PMID 20586423 DOI: 10.1021/Bi100692F  0.414
2010 Jepkorir G, Rodríguez JC, Rui H, Im W, Lovell S, Battaile KP, Alontaga AY, Yukl ET, Moënne-Loccoz P, Rivera M. Structural, NMR spectroscopic, and computational investigation of hemin loading in the hemophore HasAp from Pseudomonas aeruginosa. Journal of the American Chemical Society. 132: 9857-72. PMID 20572666 DOI: 10.1021/Ja103498Z  0.368
2010 Weeratunga SK, Lovell S, Yao H, Battaile KP, Fischer CJ, Gee CE, Rivera M. Structural studies of bacterioferritin B from Pseudomonas aeruginosa suggest a gating mechanism for iron uptake via the ferroxidase center . Biochemistry. 49: 1160-75. PMID 20067302 DOI: 10.1021/Bi9015204  0.397
2009 Rivera M, Rodríguez JC. The dual role of heme as cofactor and substrate in the biosynthesis of carbon monoxide. Metal Ions in Life Sciences. 6: 241-93. PMID 20877798 DOI: 10.1039/9781847559333-00241  0.37
2009 Ulijasz AT, Cornilescu G, von Stetten D, Cornilescu C, Velazquez Escobar F, Zhang J, Stankey RJ, Rivera M, Hildebrandt P, Vierstra RD. Cyanochromes are blue/green light photoreversible photoreceptors defined by a stable double cysteine linkage to a phycoviolobilin-type chromophore. The Journal of Biological Chemistry. 284: 29757-72. PMID 19671704 DOI: 10.1074/Jbc.M109.038513  0.323
2009 Weeratunga SK, Gee CE, Lovell S, Zeng Y, Woodin CL, Rivera M. Binding of Pseudomonas aeruginosa apobacterioferritin-associated ferredoxin to bacterioferritin B promotes heme mediation of electron delivery and mobilization of core mineral iron. Biochemistry. 48: 7420-31. PMID 19575528 DOI: 10.1021/Bi900561A  0.389
2009 Alontaga AY, Rodriguez JC, Schönbrunn E, Becker A, Funke T, Yukl ET, Hayashi T, Stobaugh J, Moënne-Loccoz P, Rivera M. Structural characterization of the hemophore HasAp from Pseudomonas aeruginosa: NMR spectroscopy reveals protein-protein interactions between Holo-HasAp and hemoglobin. Biochemistry. 48: 96-109. PMID 19072037 DOI: 10.1021/Bi801860G  0.382
2008 Wang A, Rodríguez JC, Han H, Schönbrunn E, Rivera M. X-ray crystallographic and solution state nuclear magnetic resonance spectroscopic investigations of NADP+ binding to ferredoxin NADP reductase from Pseudomonas aeruginosa. Biochemistry. 47: 8080-93. PMID 18605699 DOI: 10.1021/Bi8007356  0.409
2007 Wang A, Zeng Y, Han H, Weeratunga S, Morgan BN, Moënne-Loccoz P, Schönbrunn E, Rivera M. Biochemical and structural characterization of Pseudomonas aeruginosa Bfd and FPR: ferredoxin NADP+ reductase and not ferredoxin is the redox partner of heme oxygenase under iron-starvation conditions. Biochemistry. 46: 12198-211. PMID 17915950 DOI: 10.1021/Bi7013135  0.402
2007 Rodríguez JC, Zeng Y, Wilks A, Rivera M. The hydrogen-bonding network in heme oxygenase also functions as a modulator of enzyme dynamics: chaotic motions upon disrupting the H-bond network in heme oxygenase from Pseudomonas aeruginosa. Journal of the American Chemical Society. 129: 11730-42. PMID 17764179 DOI: 10.1021/Ja072405Q  0.384
2006 Alontaga AY, Bunce RA, Wilks A, Rivera M. 13C NMR spectroscopy of core heme carbons as a simple tool to elucidate the coordination state of ferric high-spin heme proteins. Inorganic Chemistry. 45: 8876-81. PMID 17054345 DOI: 10.1021/Ic0607484  0.411
2006 Cheng Q, Benson DR, Rivera M, Kuczera K. Influence of point mutations on the flexibility of cytochrome b5: molecular dynamics simulations of holoproteins. Biopolymers. 83: 297-312. PMID 16807901 DOI: 10.1002/Bip.20563  0.306
2006 Rodríguez JC, Wilks A, Rivera M. Backbone NMR assignments and H/D exchange studies on the ferric azide- and cyanide-inhibited forms of Pseudomonas aeruginosa heme oxygenase. Biochemistry. 45: 4578-92. PMID 16584193 DOI: 10.1021/Bi0600188  0.439
2005 Damaso CO, Bunce RA, Barybin MV, Wilks A, Rivera M. The ferrous verdoheme-heme oxygenase complex is six-coordinate and low-spin. Journal of the American Chemical Society. 127: 17582-3. PMID 16351069 DOI: 10.1021/Ja055099U  0.439
2005 Cowley AB, Sun N, Rivera M, Benson DR. Divergence in nonspecific hydrophobic packing interactions in the apo state, and its possible role in functional specialization of mitochondrial and microsomal cytochrome b5. Biochemistry. 44: 14606-15. PMID 16262260 DOI: 10.1021/Bi051337M  0.306
2005 Sun N, Wang A, Cowley AB, Altuve A, Rivera M, Benson DR. Enhancing the stability of microsomal cytochrome b5: a rational approach informed by comparative studies with the outer mitochondrial membrane isoform. Protein Engineering, Design & Selection : Peds. 18: 571-9. PMID 16246823 DOI: 10.1093/Protein/Gzi067  0.357
2005 Deshmukh R, Zeng Y, Furci LM, Huang HW, Morgan BN, Sander S, Alontaga AY, Bunce RA, Moënne-Loccoz P, Rivera M, Wilks A. Heme oxidation in a chimeric protein of the alpha-selective Neisseriae meningitidis heme oxygenase with the distal helix of the delta-selective Pseudomonas aeruginosa. Biochemistry. 44: 13713-23. PMID 16229461 DOI: 10.1021/Bi050810T  0.422
2005 Zeng Y, Caignan GA, Bunce RA, Rodríguez JC, Wilks A, Rivera M. Azide-inhibited bacterial heme oxygenases exhibit an S = 3/2 (dxz,dyz)3(dxy)1(dz2)1 spin state: mechanistic implications for heme oxidation. Journal of the American Chemical Society. 127: 9794-807. PMID 15998084 DOI: 10.1021/Ja0425987  0.769
2005 Simeonov M, Altuve A, Massiah MA, Wang A, Eastman MA, Benson DR, Rivera M. Mitochondrial and microsomal ferric b5 cytochromes exhibit divergent conformational plasticity in the context of a common fold. Biochemistry. 44: 9308-19. PMID 15981997 DOI: 10.1021/Bi050564L  0.33
2005 Andrews H, Li Z, Altuve-Blanco A, Rivera M, Burnap RL. Expression, mutagenesis, and characterization of recombinant low-potential cytochrome c550 of photosystem II. Biochemistry. 44: 6092-100. PMID 15835898 DOI: 10.1021/Bi0500473  0.382
2005 Rivera M, Zeng Y. Heme oxygenase, steering dioxygen activation toward heme hydroxylation. Journal of Inorganic Biochemistry. 99: 337-54. PMID 15598511 DOI: 10.1016/J.Jinorgbio.2004.09.016  0.395
2004 Damaso CO, Rubie ND, Moënne-Loccoz P, Rivera M. Reduction of the ferrous alpha-verdoheme-cytochrome b5 complex. Inorganic Chemistry. 43: 8470-8. PMID 15606196 DOI: 10.1021/Ic049029K  0.354
2004 Wegele R, Tasler R, Zeng Y, Rivera M, Frankenberg-Dinkel N. The heme oxygenase(s)-phytochrome system of Pseudomonas aeruginosa. The Journal of Biological Chemistry. 279: 45791-802. PMID 15310749 DOI: 10.1074/Jbc.M408303200  0.4
2004 Cowley AB, Rivera M, Benson DR. Stabilizing roles of residual structure in the empty heme binding pockets and unfolded states of microsomal and mitochondrial apocytochrome b5. Protein Science : a Publication of the Protein Society. 13: 2316-29. PMID 15295112 DOI: 10.1110/Ps.04817704  0.33
2004 Rivera M, Caignan GA. Recent developments in the 13C NMR spectroscopic analysis of paramagnetic hemes and heme proteins. Analytical and Bioanalytical Chemistry. 378: 1464-83. PMID 15214408 DOI: 10.1007/S00216-003-2340-0  0.749
2004 Zeng Y, Deshmukh R, Caignan GA, Bunce RA, Rivera M, Wilks A. Mixed regioselectivity in the Arg-177 mutants of Corynebacterium diphtheriae heme oxygenase as a consequence of in-plane heme disorder. Biochemistry. 43: 5222-38. PMID 15122888 DOI: 10.1021/Bi035970O  0.756
2004 Altuve A, Wang L, Benson DR, Rivera M. Mammalian mitochondrial and microsomal cytochromes b(5) exhibit divergent structural and biophysical characteristics. Biochemical and Biophysical Research Communications. 314: 602-9. PMID 14733950 DOI: 10.1016/J.Bbrc.2003.12.138  0.31
2003 Caignan GA, Deshmukh R, Zeng Y, Wilks A, Bunce RA, Rivera M. The hydroxide complex of Pseudomonas aeruginosa heme oxygenase as a model of the low-spin iron(III) hydroperoxide intermediate in heme catabolism: 13C NMR spectroscopic studies suggest the active participation of the heme in macrocycle hydroxylation. Journal of the American Chemical Society. 125: 11842-52. PMID 14505406 DOI: 10.1021/Ja036147I  0.772
2003 Avila L, Huang HW, Damaso CO, Lu S, Moënne-Loccoz P, Rivera M. Coupled oxidation vs heme oxygenation: insights from axial ligand mutants of mitochondrial cytochrome b5. Journal of the American Chemical Society. 125: 4103-10. PMID 12670231 DOI: 10.1021/Ja029311V  0.618
2002 Caignan GA, Deshmukh R, Wilks A, Zeng Y, Huang HW, Moënne-Loccoz P, Bunce RA, Eastman MA, Rivera M. Oxidation of heme to beta- and delta-biliverdin by Pseudomonas aeruginosa heme oxygenase as a consequence of an unusual seating of the heme. Journal of the American Chemical Society. 124: 14879-92. PMID 12475329 DOI: 10.1021/Ja0274960  0.756
2002 Cowley AB, Altuve A, Kuchment O, Terzyan S, Zhang X, Rivera M, Benson DR. Toward engineering the stability and hemin-binding properties of microsomal cytochromes b5 into rat outer mitochondrial membrane cytochrome b5: examining the influence of residues 25 and 71. Biochemistry. 41: 11566-81. PMID 12269800 DOI: 10.1021/Bi026005L  0.301
2002 Rivera M, Caignan GA, Astashkin AV, Raitsimring AM, Shokhireva TKh, Walker FA. Models of the low-spin iron(III) hydroperoxide intermediate of heme oxygenase: magnetic resonance evidence for thermodynamic stabilization of the d(xy) electronic state at ambient temperatures. Journal of the American Chemical Society. 124: 6077-89. PMID 12022842 DOI: 10.1021/Ja017334O  0.764
2001 Altuve A, Silchenko S, Lee KH, Kuczera K, Terzyan S, Zhang X, Benson DR, Rivera M. Probing the differences between rat liver outer mitochondrial membrane cytochrome b5 and microsomal cytochromes b5. Biochemistry. 40: 9469-83. PMID 11583146 DOI: 10.1021/Bi010636I  0.314
2000 Wirtz M, Oganesyan V, Zhang X, Studer J, Rivera M. Modulation of redox potential in electron transfer proteins: effects of complex formation on the active site microenvironment of cytochrome b5. Faraday Discussions. 221-34; discussion 2. PMID 11197480 DOI: 10.2210/Pdb1Eue/Pdb  0.386
2000 Silchenko S, Sippel ML, Kuchment O, Benson DR, Mauk AG, Altuve A, Rivera M. Hemin is kinetically trapped in cytochrome b(5) from rat outer mitochondrial membrane. Biochemical and Biophysical Research Communications. 273: 467-72. PMID 10873629 DOI: 10.1006/Bbrc.2000.2968  0.311
2000 Wirtz M, Klucik J, Rivera M. Ferredoxin-Mediated Electrocatalytic Dehalogenation of Haloalkanes by Cytochrome P450cam Journal of the American Chemical Society. 122: 1047-1056. DOI: 10.1021/Ja993648O  0.306
2000 Avila L, Huang H, Rodríguez JC, Moënne-Loccoz P, Rivera M. Oxygen Activation by Axial Ligand Mutants of Mitochondrial Cytochromeb5:  Oxidation of Heme to Verdoheme and Biliverdin Journal of the American Chemical Society. 122: 7618-7619. DOI: 10.1021/Ja001137S  0.576
1999 Avila L, Wirtz M, Bunce RA, Rivera M. An electrochemical study of the factors responsible for modulating the reduction potential of putidaredoxin. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 4: 664-74. PMID 10550696 DOI: 10.1007/S007750050390  0.596
1999 Rivera M, Qiu F, Bunce RA, Stark RE. Complete isomer-specific 1H and 13C NMR assignments of the heme resonances of rat liver outer mitochondrial membrane cytochrome b5 Journal of Biological Inorganic Chemistry. 4: 87-98. PMID 10499106 DOI: 10.1007/S007750050292  0.353
1998 Rodriguez JC, Rivera M. Conversion Of Mitochondrial Cytochrome B5 Into A Species Capable Of Performing The Efficient Coupled Oxidation Of Heme Biochemistry. 37: 13082-13090. PMID 9748314 DOI: 10.1021/Bi9809324  0.399
1998 Rivera M, Seetharaman R, Girdhar D, Wirtz M, Zhang X, Wang X, White S. The reduction potential of cytochrome b5 is modulated by its exposed heme edge. Biochemistry. 37: 1485-1494. PMID 9484218 DOI: 10.1021/Bi972390G  0.349
1998 Qiu F, Rivera M, Stark RE. An 1H-13C-13C-edited 1H NMR experiment for making resonance assignments in the active site of heme proteins. Journal of Magnetic Resonance (San Diego, Calif. : 1997). 130: 76-81. PMID 9469900 DOI: 10.1006/Jmre.1997.1276  0.36
1998 Rodríguez JC, Desilva T, Rivera M. Efficient Coupled Oxidation of Heme Performed by the H63M Variant of Outer Mitochondrial Membrane Cytochrome b5 Chemistry Letters. 1998: 353-354. DOI: 10.1246/Cl.1998.353  0.358
1996 Rodriguez-Maranon MJ, Qui F, Stark RE, White SP, Zhang X, Foundling SI, Rodriguez V, Schilling CL, Bunce RA, Rivera M. 13C NMR spectroscopic and X-ray crystallographic study of the role played by mitochondrial cytochrome b5 heme propionates in the electrostatic binding to cytochrome c Biochemistry. 35: 16378-16390. PMID 8973214 DOI: 10.1021/Bi961895O  0.378
1996 Seetharaman R, White SP, Rivera M. Electrochemical measurement of second-order electron transfer rate constants for the reaction between cytochrome b5 and cytochrome c Biochemistry. 35: 12455-12463. PMID 8823180 DOI: 10.1021/Bi9529723  0.321
1992 Aposhian HV, Maiorino RM, Rivera M, Bruce DC, Dart RC, Hurlbut KM, Levine DJ, Zheng W, Fernando Q, Carter D. Human studies with the chelating agents, DMPS and DMSA. Journal of Toxicology. Clinical Toxicology. 30: 505-28. PMID 1331491 DOI: 10.3109/15563659209017938  0.645
1992 Rivera M, Fernando Q. Synthesis, structure, and stability of the zinc complex of the dimethyl ester of meso-2,3-dimercaptosuccinic acid. Chemical Research in Toxicology. 5: 142-7. PMID 1316187 DOI: 10.1021/Tx00025A024  0.562
1992 Polt R, Li Y, Fernando Q, Rivera M. A synthetic method for unsymmetrical disulfides of cysteine: the bis-cysteine disulfide of meso-2,3-dimercaptosuccinic acid. Tetrahedron Letters. 33: 2961-2964. DOI: 10.1016/S0040-4039(00)79572-4  0.507
1991 Rivera M, Levine DJ, Aposhian HV, Fernando Q. Synthesis and properties of the monomethyl ester of meso-dimercaptosuccinic acid and its chelates of lead (II), cadmium(II), and mercury(II). Chemical Research in Toxicology. 4: 107-14. PMID 1655086 DOI: 10.1021/Tx00019A015  0.655
1989 Rivera M, Zheng W, Aposhian HV, Fernando Q. Determination and metabolism of dithiol chelating agents. VIII. Metal complexes of meso-dimercaptosuccinic acid. Toxicology and Applied Pharmacology. 100: 96-106. PMID 2548305 DOI: 10.1016/0041-008X(89)90094-X  0.657
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